BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014947
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24846.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis v...   145   3e-33
ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   145   5e-33
ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   144   8e-33
gb|AFK35906.1| unknown [Lotus japonicus]                              142   4e-32

>emb|CBI24846.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/108 (69%), Positives = 82/108 (75%)
 Frame = +1

Query: 1   INGVPLRRVNQSYVIGTSTKVDISSLNIEXXXXXXXXXXXXXXXXXXXXEFLEADKEEKN 180
           INGVPLRRVNQ+Y+I TSTKVDIS +N+E                    EF EADKEEK+
Sbjct: 99  INGVPLRRVNQAYIIATSTKVDISGVNVEKFDDKYFAKETQKKKKKGEGEFFEADKEEKS 158

Query: 181 VLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHELVF 324
           VLPQEKKDDQKAVD  LIKSIEGVP+LKTYL ARFSLK+GMKPHELVF
Sbjct: 159 VLPQEKKDDQKAVDTPLIKSIEGVPDLKTYLGARFSLKAGMKPHELVF 206


>ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis vinifera]
          Length = 233

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/108 (69%), Positives = 82/108 (75%)
 Frame = +1

Query: 1   INGVPLRRVNQSYVIGTSTKVDISSLNIEXXXXXXXXXXXXXXXXXXXXEFLEADKEEKN 180
           INGVPLRRVNQ+Y+I TSTKVDIS +N+E                    EF EADKEEK+
Sbjct: 126 INGVPLRRVNQAYIIATSTKVDISGVNVEKFDDKYFAKETQKKKKKGEGEFFEADKEEKS 185

Query: 181 VLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHELVF 324
           VLPQEKKDDQKAVD  LIKSIEGVP+LKTYL ARFSLK+GMKPHELVF
Sbjct: 186 VLPQEKKDDQKAVDTPLIKSIEGVPDLKTYLGARFSLKAGMKPHELVF 233


>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  145 bits (366), Expect = 5e-33
 Identities = 76/108 (70%), Positives = 81/108 (75%)
 Frame = +1

Query: 1   INGVPLRRVNQSYVIGTSTKVDISSLNIEXXXXXXXXXXXXXXXXXXXXEFLEADKEEKN 180
           INGVPLRRVNQSYVI TSTKVDIS +N +                    EF EA+KEEKN
Sbjct: 124 INGVPLRRVNQSYVIATSTKVDISGVNADKFDDKYFAKQAEKRKKKGEGEFFEAEKEEKN 183

Query: 181 VLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHELVF 324
           VLPQEKKDDQK +DA LIKSIEGVPELK YLAARFSLK+GMKPHELVF
Sbjct: 184 VLPQEKKDDQKTLDAALIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231


>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  144 bits (364), Expect = 8e-33
 Identities = 75/108 (69%), Positives = 81/108 (75%)
 Frame = +1

Query: 1   INGVPLRRVNQSYVIGTSTKVDISSLNIEXXXXXXXXXXXXXXXXXXXXEFLEADKEEKN 180
           INGVPLRRVNQSYVI TSTKVDIS +N++                    EF EA+K+EKN
Sbjct: 126 INGVPLRRVNQSYVIATSTKVDISGVNVDKFDDKFFAKQAEKKKKKGEGEFFEAEKDEKN 185

Query: 181 VLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHELVF 324
           VLPQEKKDDQK VDA LIKSIE VPELK YLAARFSLK+GMKPHELVF
Sbjct: 186 VLPQEKKDDQKTVDAALIKSIEAVPELKAYLAARFSLKAGMKPHELVF 233


>gb|AFK35906.1| unknown [Lotus japonicus]
          Length = 233

 Score =  142 bits (358), Expect = 4e-32
 Identities = 72/108 (66%), Positives = 81/108 (75%)
 Frame = +1

Query: 1   INGVPLRRVNQSYVIGTSTKVDISSLNIEXXXXXXXXXXXXXXXXXXXXEFLEADKEEKN 180
           INGVPLRRVNQSYVIGTSTKVD+S++N++                    EF EA+KEEKN
Sbjct: 126 INGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFSKEAQKKKKKGEGEFFEAEKEEKN 185

Query: 181 VLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHELVF 324
            LPQEKKDDQK VD+ LI +IEGVPELK YL ARFSLKSGMKPHEL+F
Sbjct: 186 ALPQEKKDDQKTVDSSLITAIEGVPELKAYLGARFSLKSGMKPHELLF 233