BLASTX nr result

ID: Coptis23_contig00014943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014943
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71784.1| hypothetical protein VITISV_028800 [Vitis vinifera]   398   e-108
ref|XP_002283483.1| PREDICTED: uncharacterized protein LOC100242...   395   e-108
ref|XP_003536502.1| PREDICTED: stem-specific protein TSJT1 [Glyc...   390   e-106
ref|XP_002517063.1| Stem-specific protein TSJT1, putative [Ricin...   390   e-106
gb|AFK38951.1| unknown [Lotus japonicus]                              389   e-106

>emb|CAN71784.1| hypothetical protein VITISV_028800 [Vitis vinifera]
          Length = 249

 Score =  398 bits (1023), Expect = e-108
 Identities = 187/249 (75%), Positives = 222/249 (89%), Gaps = 1/249 (0%)
 Frame = +3

Query: 36  MLAIFDKSVAKSPEGLKSPESNSVPATKDGFLAEEFSSVHPGSITINLGEA-VVAYSPEK 212
           MLA+F KS+A++PEGL++P+S S+PA KDGFL + F+S+HP ++T+NLG +  ++YS +K
Sbjct: 1   MLAVFHKSIAEAPEGLRTPDSASLPALKDGFLPQFFASLHPSAVTVNLGSSGAISYSVDK 60

Query: 213 QNPLLPRLFAVVDGIFCLFQGHIENVALLKQQYGLGKTANEVIIVIEAYRTLRDRGPYPA 392
           QNPLLPRLFAVVD IFCLFQGHIENVALLKQQYGL KTANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENVALLKQQYGLNKTANEVIIVIEAYRTLRDRGPYPA 120

Query: 393 DQVVRDIHGKFAFILYDSSLKATFVAADADVSVPFFWGTNSDDNLIFSDDLVVLSKGCGK 572
           DQVVRD+HGKFAF+LYDSS +  F+AADAD SVPFFWG +S+ +L+ SDD   + KGCGK
Sbjct: 121 DQVVRDLHGKFAFVLYDSSNRTAFLAADADESVPFFWGVDSEGHLVLSDDEETVKKGCGK 180

Query: 573 SSAPFPKGCFFTTSGGLRSFEHPLNEVKAMPRVDSSGEVCGATYKVDVDSKKEAGIPRVG 752
           S APFPKGCFFTTSGGLRSFEHPLNE++A PRVDSSG+VCGA +KVDV++KKE G+PRVG
Sbjct: 181 SFAPFPKGCFFTTSGGLRSFEHPLNELRAEPRVDSSGQVCGANFKVDVEAKKETGMPRVG 240

Query: 753 SAANWSSHY 779
           SAANWS+HY
Sbjct: 241 SAANWSTHY 249


>ref|XP_002283483.1| PREDICTED: uncharacterized protein LOC100242660 [Vitis vinifera]
           gi|297737115|emb|CBI26316.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  395 bits (1015), Expect = e-108
 Identities = 186/249 (74%), Positives = 221/249 (88%), Gaps = 1/249 (0%)
 Frame = +3

Query: 36  MLAIFDKSVAKSPEGLKSPESNSVPATKDGFLAEEFSSVHPGSITINLGEA-VVAYSPEK 212
           MLA+F KS+A++PEGL++P+S S+PA KDGFL + F+S+HP ++T+NLG +  ++YS +K
Sbjct: 1   MLAVFHKSIAEAPEGLRTPDSASLPALKDGFLPQFFASLHPSAVTVNLGSSGAISYSVDK 60

Query: 213 QNPLLPRLFAVVDGIFCLFQGHIENVALLKQQYGLGKTANEVIIVIEAYRTLRDRGPYPA 392
           QNPLLPRLFAVVD IFCLFQGHIENVALLKQQYGL KTANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENVALLKQQYGLNKTANEVIIVIEAYRTLRDRGPYPA 120

Query: 393 DQVVRDIHGKFAFILYDSSLKATFVAADADVSVPFFWGTNSDDNLIFSDDLVVLSKGCGK 572
           DQVVRD+HGKFAF+LYDSS +  F+AADAD SVPFFWG +S+ +L+ SDD   + KGCG 
Sbjct: 121 DQVVRDLHGKFAFVLYDSSNRTAFLAADADESVPFFWGVDSEGHLVLSDDEETVKKGCGI 180

Query: 573 SSAPFPKGCFFTTSGGLRSFEHPLNEVKAMPRVDSSGEVCGATYKVDVDSKKEAGIPRVG 752
           S APFPKGCFFTTSGGLRSFEHPLNE++A PRVDSSG+VCGA +KVDV++KKE G+PRVG
Sbjct: 181 SFAPFPKGCFFTTSGGLRSFEHPLNELRAEPRVDSSGQVCGANFKVDVEAKKETGMPRVG 240

Query: 753 SAANWSSHY 779
           SAANWS+HY
Sbjct: 241 SAANWSTHY 249


>ref|XP_003536502.1| PREDICTED: stem-specific protein TSJT1 [Glycine max]
          Length = 250

 Score =  390 bits (1003), Expect = e-106
 Identities = 193/249 (77%), Positives = 218/249 (87%), Gaps = 2/249 (0%)
 Frame = +3

Query: 36  MLAIFDKSVAKSPEGLKSPESNSVPATKDGFLAEEFSSVHPGSITINLGEA-VVAYSPEK 212
           MLA+FDKSVAKSPEGL+SP SNSV A KDGFLAE FSSVHPGS+T+NLG + ++AYS  K
Sbjct: 1   MLAVFDKSVAKSPEGLQSPHSNSVSALKDGFLAEHFSSVHPGSVTVNLGSSGLLAYSLHK 60

Query: 213 QNPLLPRLFAVVDGIFCLFQGHIENVALLKQQYGLGKTANEVIIVIEAYRTLRDRGPYPA 392
           QNPLLPRLFAVVD IFCLFQGH+ENVA LKQQYGL KTA EVII+IEAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHLENVANLKQQYGLNKTATEVIIIIEAYRTLRDRGPYPA 120

Query: 393 DQVVRDIHGKFAFILYDSSLKATFVAADADVSVPFFWGTNSDDNLIFSDDLVVLSKGCGK 572
            QVVRD  GKFAFILYDS  K  FVAADAD SVPF WGT++D NL+FSD+  +++K CGK
Sbjct: 121 AQVVRDFQGKFAFILYDSGSKTAFVAADADGSVPFVWGTDADGNLVFSDETEIVTKSCGK 180

Query: 573 SSAPFPKGCFFTTSGGLRSFEHPLNEVKAMPRVDSSGEVCGATYKVDVDSKKEA-GIPRV 749
           S APFPKG FF+TSGGL SFEHPLNEVK +PRVDSSG+VCGAT+KVD ++KKEA G+PRV
Sbjct: 181 SYAPFPKGFFFSTSGGLSSFEHPLNEVKPVPRVDSSGQVCGATFKVDAEAKKEATGMPRV 240

Query: 750 GSAANWSSH 776
           GSAANWS++
Sbjct: 241 GSAANWSNN 249


>ref|XP_002517063.1| Stem-specific protein TSJT1, putative [Ricinus communis]
           gi|223543698|gb|EEF45226.1| Stem-specific protein TSJT1,
           putative [Ricinus communis]
          Length = 249

 Score =  390 bits (1001), Expect = e-106
 Identities = 185/249 (74%), Positives = 218/249 (87%), Gaps = 1/249 (0%)
 Frame = +3

Query: 36  MLAIFDKSVAKSPEGLKSPESNSVPATKDGFLAEEFSSVHPGSITINLGEA-VVAYSPEK 212
           MLA+FD +VAK P+ L+SP S S  A KDGFLA+ F S+HP S+T+NLG A ++AYS +K
Sbjct: 1   MLAVFDNTVAKCPDALQSPHSASSSALKDGFLAKHFGSIHPASVTVNLGTAGIIAYSLDK 60

Query: 213 QNPLLPRLFAVVDGIFCLFQGHIENVALLKQQYGLGKTANEVIIVIEAYRTLRDRGPYPA 392
           QNPLLPRLFAVVD IFCLFQGHIEN+A+LKQQYGL KTANEVIIVIEA+RTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENIAVLKQQYGLNKTANEVIIVIEAFRTLRDRGPYPA 120

Query: 393 DQVVRDIHGKFAFILYDSSLKATFVAADADVSVPFFWGTNSDDNLIFSDDLVVLSKGCGK 572
           DQVVRDI GKFAF+LYDS+ KATF+AADAD SVPFFWG +S+ +L+ SDD  +L + CGK
Sbjct: 121 DQVVRDIQGKFAFVLYDSTSKATFIAADADGSVPFFWGADSERHLVLSDDAQILQQACGK 180

Query: 573 SSAPFPKGCFFTTSGGLRSFEHPLNEVKAMPRVDSSGEVCGATYKVDVDSKKEAGIPRVG 752
           S APFPKGCFFTTSGGLRS+EHPLNE+K +PRVDSSG+VCGAT+KVD ++KKE G+PRVG
Sbjct: 181 SFAPFPKGCFFTTSGGLRSYEHPLNELKPVPRVDSSGQVCGATFKVDAETKKEGGMPRVG 240

Query: 753 SAANWSSHY 779
           SA +WSS+Y
Sbjct: 241 SAYDWSSNY 249


>gb|AFK38951.1| unknown [Lotus japonicus]
          Length = 250

 Score =  389 bits (1000), Expect = e-106
 Identities = 190/250 (76%), Positives = 222/250 (88%), Gaps = 2/250 (0%)
 Frame = +3

Query: 36  MLAIFDKSVAKSPEGLKSPESNSVPATKDGFLAEEFSSVHPGSITINL-GEAVVAYSPEK 212
           MLA+F KSVAKSPEGL+SP+S+SV A KDGFLA+ F+SV+P S+T+NL   A++AYS +K
Sbjct: 1   MLAVFGKSVAKSPEGLQSPQSSSVSAIKDGFLAKHFTSVYPSSVTLNLVPSALLAYSIDK 60

Query: 213 QNPLLPRLFAVVDGIFCLFQGHIENVALLKQQYGLGKTANEVIIVIEAYRTLRDRGPYPA 392
            NPLLPRLFAVVD IFCLFQGHI+NVA LKQQYGL KTANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  HNPLLPRLFAVVDDIFCLFQGHIDNVAHLKQQYGLNKTANEVIIVIEAYRTLRDRGPYPA 120

Query: 393 DQVVRDIHGKFAFILYDSSLKATFVAADADVSVPFFWGTNSDDNLIFSDDLVVLSKGCGK 572
           DQVVRD  GKFAFIL+DSS K  FVA+D+D SVPFFWGT++D NL+ SD++ ++SK CGK
Sbjct: 121 DQVVRDFQGKFAFILFDSSSKTAFVASDSDGSVPFFWGTDADGNLVLSDEMGIVSKSCGK 180

Query: 573 SSAPFPKGCFFTTSGGLRSFEHPLNEVKAMPRVDSSGEVCGATYKVDVDSKKE-AGIPRV 749
           S APFPKGCFFTTSGGLR+FEHPLNE+K +PRVDSSG+VCGAT+KVD ++KKE  G+PRV
Sbjct: 181 SFAPFPKGCFFTTSGGLRNFEHPLNELKPVPRVDSSGQVCGATFKVDAETKKETTGMPRV 240

Query: 750 GSAANWSSHY 779
           GSAANWSS+Y
Sbjct: 241 GSAANWSSNY 250


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