BLASTX nr result

ID: Coptis23_contig00014937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014937
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549634.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...   177   1e-65
ref|XP_002280126.2| PREDICTED: ubiquitin-conjugating enzyme E2 5...   177   1e-65
ref|XP_002321579.1| predicted protein [Populus trichocarpa] gi|1...   174   2e-65
ref|NP_001237311.1| uncharacterized protein LOC100527526 [Glycin...   176   1e-64
gb|AFK44151.1| unknown [Lotus japonicus]                              173   2e-64

>ref|XP_003549634.1| PREDICTED: ubiquitin-conjugating enzyme E2 5-like isoform 1
           [Glycine max] gi|356562757|ref|XP_003549635.1|
           PREDICTED: ubiquitin-conjugating enzyme E2 5-like
           isoform 2 [Glycine max]
          Length = 184

 Score =  177 bits (449), Expect(2) = 1e-65
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = -2

Query: 546 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEFHGPKESLYEGGVWKIRVELPDAYP 367
           MSSPSKRR+MDVMKLMMSDY+VE INDG+NEFNVEFHGPKESLYEGGVWKIRVELPDAYP
Sbjct: 1   MSSPSKRREMDVMKLMMSDYAVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYP 60

Query: 366 YKSPSVGFLNKIFHPNVDELSGSVCLDV 283
           YKSPS+GF+NKIFHPNVDELSGSVCLDV
Sbjct: 61  YKSPSIGFVNKIFHPNVDELSGSVCLDV 88



 Score = 99.8 bits (247), Expect(2) = 1e-65
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -3

Query: 167 VFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKRENIDN 9
           VFEVFLPQLLLYPN SDPLNGDAASLM+KDK+ Y+QKVKEYCERYAK+ENI N
Sbjct: 102 VFEVFLPQLLLYPNASDPLNGDAASLMMKDKKLYDQKVKEYCERYAKKENISN 154


>ref|XP_002280126.2| PREDICTED: ubiquitin-conjugating enzyme E2 5-like isoform 1 [Vitis
           vinifera] gi|359491603|ref|XP_003634294.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 5-like isoform 2 [Vitis
           vinifera] gi|297733817|emb|CBI15064.3| unnamed protein
           product [Vitis vinifera]
          Length = 184

 Score =  177 bits (449), Expect(2) = 1e-65
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = -2

Query: 546 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEFHGPKESLYEGGVWKIRVELPDAYP 367
           MSSPSKRR+MDVMKLMMSDY+VE INDG+NEFNVEFHGPKESLYEGGVWKIRVELPDAYP
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYP 60

Query: 366 YKSPSVGFLNKIFHPNVDELSGSVCLDV 283
           YKSPS+GF+NKIFHPNVDELSGSVCLDV
Sbjct: 61  YKSPSIGFVNKIFHPNVDELSGSVCLDV 88



 Score = 99.4 bits (246), Expect(2) = 1e-65
 Identities = 45/54 (83%), Positives = 51/54 (94%)
 Frame = -3

Query: 167 VFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKRENIDND 6
           VFEVFLPQLLLYPN SDPLNGDAAS+M+K+K QYE+KVKEYCERYAK+ENI N+
Sbjct: 102 VFEVFLPQLLLYPNASDPLNGDAASMMMKNKDQYEKKVKEYCERYAKKENITNE 155


>ref|XP_002321579.1| predicted protein [Populus trichocarpa] gi|118487761|gb|ABK95704.1|
           unknown [Populus trichocarpa]
           gi|222868575|gb|EEF05706.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  174 bits (441), Expect(2) = 2e-65
 Identities = 80/88 (90%), Positives = 86/88 (97%)
 Frame = -2

Query: 546 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEFHGPKESLYEGGVWKIRVELPDAYP 367
           MSSPSKRR+MDVMKLMMSDY+VE INDG+N+FNVEFHGPKESLYEGGVWKI VELPDAYP
Sbjct: 1   MSSPSKRREMDVMKLMMSDYNVETINDGLNDFNVEFHGPKESLYEGGVWKIHVELPDAYP 60

Query: 366 YKSPSVGFLNKIFHPNVDELSGSVCLDV 283
           YKSPS+GF+NKIFHPNVDELSGSVCLDV
Sbjct: 61  YKSPSIGFVNKIFHPNVDELSGSVCLDV 88



 Score =  102 bits (253), Expect(2) = 2e-65
 Identities = 46/53 (86%), Positives = 52/53 (98%)
 Frame = -3

Query: 167 VFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKRENIDN 9
           VFEVFLPQLL+YPNPSDPLNGDAASLM+KDK+QY+QKVKEYCERYAK+E+I N
Sbjct: 102 VFEVFLPQLLIYPNPSDPLNGDAASLMMKDKEQYDQKVKEYCERYAKKEHIMN 154


>ref|NP_001237311.1| uncharacterized protein LOC100527526 [Glycine max]
           gi|255632544|gb|ACU16622.1| unknown [Glycine max]
          Length = 185

 Score =  176 bits (446), Expect(2) = 1e-64
 Identities = 81/88 (92%), Positives = 87/88 (98%)
 Frame = -2

Query: 546 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEFHGPKESLYEGGVWKIRVELPDAYP 367
           MSSPSKRR+MDVMKLMMSDY++E INDG+NEFNVEFHGPKESLYEGGVWKIRVELPDAYP
Sbjct: 1   MSSPSKRREMDVMKLMMSDYTMETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYP 60

Query: 366 YKSPSVGFLNKIFHPNVDELSGSVCLDV 283
           YKSPS+GF+NKIFHPNVDELSGSVCLDV
Sbjct: 61  YKSPSIGFVNKIFHPNVDELSGSVCLDV 88



 Score = 97.4 bits (241), Expect(2) = 1e-64
 Identities = 45/53 (84%), Positives = 49/53 (92%)
 Frame = -3

Query: 167 VFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKRENIDN 9
           VFE FLPQLLLYPN SDPLNGDAASLM+KDK+ Y+QKVKEYCERYAK+ENI N
Sbjct: 102 VFEAFLPQLLLYPNASDPLNGDAASLMMKDKELYDQKVKEYCERYAKKENICN 154


>gb|AFK44151.1| unknown [Lotus japonicus]
          Length = 186

 Score =  173 bits (439), Expect(2) = 2e-64
 Identities = 79/88 (89%), Positives = 87/88 (98%)
 Frame = -2

Query: 546 MSSPSKRRDMDVMKLMMSDYSVEPINDGINEFNVEFHGPKESLYEGGVWKIRVELPDAYP 367
           MSSPSKRR+MDVMKLMMSDY+VE INDG++EFNVEFHGPKESLYEGGVWK+RVELPDAYP
Sbjct: 1   MSSPSKRREMDVMKLMMSDYTVETINDGLSEFNVEFHGPKESLYEGGVWKVRVELPDAYP 60

Query: 366 YKSPSVGFLNKIFHPNVDELSGSVCLDV 283
           +KSPS+GF+NKIFHPNVDELSGSVCLDV
Sbjct: 61  FKSPSIGFVNKIFHPNVDELSGSVCLDV 88



 Score = 99.4 bits (246), Expect(2) = 2e-64
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -3

Query: 167 VFEVFLPQLLLYPNPSDPLNGDAASLMLKDKQQYEQKVKEYCERYAKRENIDN 9
           VFEVFLPQLLLYPN SDPLNGDAASLM+KDK+ Y+QKVKEYCERYAK+ENI N
Sbjct: 102 VFEVFLPQLLLYPNASDPLNGDAASLMMKDKKLYDQKVKEYCERYAKKENITN 154


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