BLASTX nr result

ID: Coptis23_contig00014919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014919
         (1272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2...   337   4e-90
ref|XP_002315097.1| peroxisomal membrane ABC transporter family,...   334   3e-89
emb|CBI24120.3| unnamed protein product [Vitis vinifera]              320   4e-85
ref|XP_002514370.1| peroxisomal membrane protein, putative [Rici...   320   5e-85
ref|XP_003565605.1| PREDICTED: ABC transporter D family member 2...   295   2e-77

>ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like
            [Vitis vinifera]
          Length = 722

 Score =  337 bits (864), Expect = 4e-90
 Identities = 176/286 (61%), Positives = 209/286 (73%), Gaps = 8/286 (2%)
 Frame = +3

Query: 96   EKCHKLLDIENLTLQTPKSRSTLIKDLSLEINKKDNLLVMGPSGSGKTSLLRAMAGLWNT 275
            +KC KLLDIENLTL TPKS++ LI DLSLEI +KD+LLV GPSGSGKTSLLRA+AGLW+T
Sbjct: 429  DKCQKLLDIENLTLLTPKSKTALIWDLSLEIYEKDHLLVTGPSGSGKTSLLRALAGLWST 488

Query: 276  GGGTITFYMRDVEDQQL--------PISSDRPQEVSSENRRAKGIFFLPQRPYMVLGTLR 431
            G G ITF ++  ED  L        P     P     +N+ ++GIFFLPQRPYMVLGTLR
Sbjct: 489  GRGKITFSVKGDEDPLLGAAPLEATPSQDTYPGVEQPKNKDSRGIFFLPQRPYMVLGTLR 548

Query: 432  QQLLYPTWSEGSLPIAESTKLPDSLSILSQQPRSENAAIGPKKPKDEDLIQVLVDVRLGY 611
            QQLLYPTW+E  +P+ +  +   +L  L      EN    P+KP  +D+I+VL DVRLGY
Sbjct: 549  QQLLYPTWAEDVIPVTDGDEPDGTLPFLMGVSTLENEGENPRKPTTDDIIRVLEDVRLGY 608

Query: 612  ILSRFNGLDSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDETNEAHLYRQI 791
            ILSRFN LDST EWSSVLSLGEQQRLAFAR           DESTSALDE NEAHLY+QI
Sbjct: 609  ILSRFNSLDSTYEWSSVLSLGEQQRLAFARLLLSKPNLVLLDESTSALDEANEAHLYQQI 668

Query: 792  EAAGITYVSVGHRRTLEKYHRKKLHISKMDDDSSQQNWLLKDINQN 929
            EAAGITYVS+GHRRTL  YH ++LHIS  D +S+Q+NW ++ INQ+
Sbjct: 669  EAAGITYVSIGHRRTLYGYHNRRLHISAADPNSTQRNWYIEPINQD 714


>ref|XP_002315097.1| peroxisomal membrane ABC transporter family, PMP family [Populus
            trichocarpa] gi|222864137|gb|EEF01268.1| peroxisomal
            membrane ABC transporter family, PMP family [Populus
            trichocarpa]
          Length = 651

 Score =  334 bits (856), Expect = 3e-89
 Identities = 171/278 (61%), Positives = 207/278 (74%)
 Frame = +3

Query: 96   EKCHKLLDIENLTLQTPKSRSTLIKDLSLEINKKDNLLVMGPSGSGKTSLLRAMAGLWNT 275
            ++C K+LD+ENLTLQTP S++ LI+DLSL INKKD+LLV GPSGSGKTSLLRA+AGLWNT
Sbjct: 368  DRCQKVLDLENLTLQTPTSKAILIRDLSLVINKKDHLLVTGPSGSGKTSLLRALAGLWNT 427

Query: 276  GGGTITFYMRDVEDQQLPISSDRPQEVSSENRRAKGIFFLPQRPYMVLGTLRQQLLYPTW 455
            G G ITFY+ +  D Q P SS+  +     NR  +GIFFLPQRPYMVLGTLRQQLLYPTW
Sbjct: 428  GQGKITFYVNEGNDPQAPTSSEELE--GPINRNDRGIFFLPQRPYMVLGTLRQQLLYPTW 485

Query: 456  SEGSLPIAESTKLPDSLSILSQQPRSENAAIGPKKPKDEDLIQVLVDVRLGYILSRFNGL 635
            ++  +P ++      SL  L +   S  +     KP  +DLIQVL DVRLGYILSRF  L
Sbjct: 486  ADDVIPTSDGGNPAGSLPFLMRNSSSGTSGGKRSKPTTDDLIQVLEDVRLGYILSRFGSL 545

Query: 636  DSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDETNEAHLYRQIEAAGITYV 815
            DST+EWSSVLSLGEQQRLAFAR           DESTSALDE NE HLYRQIEAAG+TY+
Sbjct: 546  DSTHEWSSVLSLGEQQRLAFARLLLSKPKVVLLDESTSALDEANEEHLYRQIEAAGMTYI 605

Query: 816  SVGHRRTLEKYHRKKLHISKMDDDSSQQNWLLKDINQN 929
            SVGHRRTL  +H + LHI+ +D  S+++NW ++ IN++
Sbjct: 606  SVGHRRTLYDHHNRNLHITTVDPSSNERNWHVEPINRD 643


>emb|CBI24120.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  320 bits (821), Expect = 4e-85
 Identities = 168/278 (60%), Positives = 198/278 (71%)
 Frame = +3

Query: 96   EKCHKLLDIENLTLQTPKSRSTLIKDLSLEINKKDNLLVMGPSGSGKTSLLRAMAGLWNT 275
            +KC KLLDIENLTL TPKS++ LI DLSLEI +KD+LLV GPSGSGKTSLLRA+AGLW T
Sbjct: 429  DKCQKLLDIENLTLLTPKSKTALIWDLSLEIYEKDHLLVTGPSGSGKTSLLRALAGLWTT 488

Query: 276  GGGTITFYMRDVEDQQLPISSDRPQEVSSENRRAKGIFFLPQRPYMVLGTLRQQLLYPTW 455
                             P     P     +N+ ++GIFFLPQRPYMVLGTLRQQLLYPTW
Sbjct: 489  -----------------PSQDTYPGVEQPKNKDSRGIFFLPQRPYMVLGTLRQQLLYPTW 531

Query: 456  SEGSLPIAESTKLPDSLSILSQQPRSENAAIGPKKPKDEDLIQVLVDVRLGYILSRFNGL 635
            +E  +P+ +  +   +L  L      EN    P+KP  +D+I+VL DVRLGYILSRFN L
Sbjct: 532  AEDVIPVTDGDEPDGTLPFLMGVSTLENEGENPRKPTTDDIIRVLEDVRLGYILSRFNSL 591

Query: 636  DSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDETNEAHLYRQIEAAGITYV 815
            DST EWSSVLSLGEQQRLAFAR           DESTSALDE NEAHLY+QIEAAGITYV
Sbjct: 592  DSTYEWSSVLSLGEQQRLAFARLLLSKPNLVLLDESTSALDEANEAHLYQQIEAAGITYV 651

Query: 816  SVGHRRTLEKYHRKKLHISKMDDDSSQQNWLLKDINQN 929
            S+GHRRTL  YH ++LHIS  D +S+Q+NW ++ INQ+
Sbjct: 652  SIGHRRTLYGYHNRRLHISAADPNSTQRNWYIEPINQD 689


>ref|XP_002514370.1| peroxisomal membrane protein, putative [Ricinus communis]
            gi|223546467|gb|EEF47966.1| peroxisomal membrane protein,
            putative [Ricinus communis]
          Length = 742

 Score =  320 bits (820), Expect = 5e-85
 Identities = 170/287 (59%), Positives = 209/287 (72%), Gaps = 11/287 (3%)
 Frame = +3

Query: 96   EKCHKLLDIENLTLQTPKSRSTLIKDLSLEINKKDNLLVMGPSGSGKTSLLRAMAGLWNT 275
            EKC KLL+IENLTL+TP S++TLI+DLSL INK D+LLVMGPSGSGKTSLLRA+AGLWNT
Sbjct: 449  EKCQKLLEIENLTLKTPASKATLIQDLSLAINKNDHLLVMGPSGSGKTSLLRALAGLWNT 508

Query: 276  GGGTITFYMRDVED----------QQLPISSDRPQEVSSEN-RRAKGIFFLPQRPYMVLG 422
            G G ITFY+ D +D           ++ I  D+ +E+     R ++GIFFLPQRPYMVLG
Sbjct: 509  GRGKITFYVNDGDDFLSPAYPMSATEVDILQDKSKELEGPTGRNSRGIFFLPQRPYMVLG 568

Query: 423  TLRQQLLYPTWSEGSLPIAESTKLPDSLSILSQQPRSENAAIGPKKPKDEDLIQVLVDVR 602
            TLRQQLLYPTW++  +  ++ +K   ++  L  +  S+     P KP  +DL+QVL  VR
Sbjct: 569  TLRQQLLYPTWADDVVSTSDVSK--SAVPFLMGKASSKTMRGKPSKPTTDDLVQVLEKVR 626

Query: 603  LGYILSRFNGLDSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDETNEAHLY 782
            L YILSRF  LDSTNEWSSVLSLGEQQRLAFAR           DE+TSALDE NEAHLY
Sbjct: 627  LCYILSRFGSLDSTNEWSSVLSLGEQQRLAFARLLLSKPKLVLLDEATSALDEANEAHLY 686

Query: 783  RQIEAAGITYVSVGHRRTLEKYHRKKLHISKMDDDSSQQNWLLKDIN 923
            +QIEAAGITY+S+GHRRTL +YH   LHI+  D  +S++NW ++ IN
Sbjct: 687  QQIEAAGITYISIGHRRTLCEYHNTVLHIATGDPLNSKRNWHIESIN 733


>ref|XP_003565605.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like
            [Brachypodium distachyon]
          Length = 754

 Score =  295 bits (754), Expect = 2e-77
 Identities = 163/291 (56%), Positives = 201/291 (69%), Gaps = 13/291 (4%)
 Frame = +3

Query: 111  LLDIENLTLQTPKSRSTLIKDLSLEINKKDNLLVMGPSGSGKTSLLRAMAGLWNTGGGTI 290
            +L+I NLTL TP+S + L+ D S+E+  KD+LLVMGPSGSGKTSLLRA+AGLW +G G I
Sbjct: 461  VLEICNLTLLTPRSENVLLTDFSMELKDKDHLLVMGPSGSGKTSLLRALAGLWTSGTGNI 520

Query: 291  TFYMRD-VEDQQLPISSDRPQEV---------SSENRRAKGIFFLPQRPYMVLGTLRQQL 440
             ++ RD  E Q   + SD+P  +         SS+ RR  GIFF+PQRPYMVLGTLRQQL
Sbjct: 521  VYHARDSAELQTSNLGSDKPSNIKPEGEELLQSSKQRRDNGIFFVPQRPYMVLGTLRQQL 580

Query: 441  LYPTWSEG--SLPIAESTKLPDSLSILSQQPRSENAAIGPKKPKDEDLIQVLVDVRLGYI 614
            LYPTW+E     PI ++ K    L  LS+   S+      + P  E+LI+VL  VRLGYI
Sbjct: 581  LYPTWTEKIHQSPINDAQKT--DLPFLSEVNTSDGVGAESEMPSTEELIRVLEAVRLGYI 638

Query: 615  LSRFNGLDSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDETNEAHLYRQIE 794
            L RFNGLDS ++W+SVLSLGEQQRLAFAR           DESTSALD+TNE HLY QIE
Sbjct: 639  LPRFNGLDSMHDWASVLSLGEQQRLAFARLLLAKPTLVLLDESTSALDDTNEVHLYSQIE 698

Query: 795  AAGITYVSVGHRRTLEKYHRKKLHISKMDD-DSSQQNWLLKDINQNVTDKS 944
            AAGITY+SVGHR+TL ++H K L+ISK D   SS +NW LK  +Q   ++S
Sbjct: 699  AAGITYISVGHRKTLHRFHNKVLYISKSDSTTSSLRNWELKPTDQKSIEES 749


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