BLASTX nr result

ID: Coptis23_contig00014908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014908
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263089.2| PREDICTED: uncharacterized protein LOC100254...   229   5e-58
emb|CBI27322.3| unnamed protein product [Vitis vinifera]              216   5e-54
ref|XP_002311405.1| predicted protein [Populus trichocarpa] gi|2...   213   4e-53
ref|XP_003614248.1| hypothetical protein MTR_5g047050 [Medicago ...   211   2e-52
ref|XP_002512049.1| conserved hypothetical protein [Ricinus comm...   207   2e-51

>ref|XP_002263089.2| PREDICTED: uncharacterized protein LOC100254361 [Vitis vinifera]
          Length = 225

 Score =  229 bits (584), Expect = 5e-58
 Identities = 128/227 (56%), Positives = 155/227 (68%), Gaps = 8/227 (3%)
 Frame = -2

Query: 759 MGRTGLRSPXXXXXXXXXXXXXRFLPVQVESTVDFSNIIGDQTKQLDYGV-----EPGEV 595
           MGRTG R P             R     + S  D ++I  DQ  +    V     + G +
Sbjct: 1   MGRTGARLPSFCLNRIRPLVRVR--SPSILSKPDANSIKTDQKTENSPSVGEENAKAGLI 58

Query: 594 VGRRIMIVVDSSLEAKCALQWVLSHGVQSQDTIVLLYVIIS-KQGKKSSRNTSRRVYEL- 421
           +GRRIMIVVDSS+EAK ALQW LSH VQSQDT++LLYV    KQG++  +  + RVYEL 
Sbjct: 59  IGRRIMIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEECGKEVAPRVYELL 118

Query: 420 HSMKNTCLMKRPEVQVEIALVEGKEKAPIIVEEVKKQGASLLVLGQRKRSIMWHAVMMWR 241
           +SMKN C +KRPEV++E+A+VEGKEK P IVEE KK+G +LLVLGQRKRS+ W  VMMW 
Sbjct: 119 YSMKNVCQLKRPEVEIEVAVVEGKEKGPTIVEEAKKRGVALLVLGQRKRSMTWRLVMMWA 178

Query: 240 TNRTGASVVEYCIENANCMTVAVREKSRT-GGYLITTKHHKDFWQLA 103
            NR G  VVEYCI+NA+CM +AVR KS+  GGYLITTK HKDFW LA
Sbjct: 179 VNRVGGGVVEYCIQNADCMAIAVRRKSKKGGGYLITTKRHKDFWLLA 225


>emb|CBI27322.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  216 bits (550), Expect = 5e-54
 Identities = 109/162 (67%), Positives = 129/162 (79%), Gaps = 3/162 (1%)
 Frame = -2

Query: 579 MIVVDSSLEAKCALQWVLSHGVQSQDTIVLLYVIIS-KQGKKSSRNTSRRVYEL-HSMKN 406
           MIVVDSS+EAK ALQW LSH VQSQDT++LLYV    KQG++  +  + RVYEL +SMKN
Sbjct: 1   MIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEECGKEVAPRVYELLYSMKN 60

Query: 405 TCLMKRPEVQVEIALVEGKEKAPIIVEEVKKQGASLLVLGQRKRSIMWHAVMMWRTNRTG 226
            C +KRPEV++E+A+VEGKEK P IVEE KK+G +LLVLGQRKRS+ W  VMMW  NR G
Sbjct: 61  VCQLKRPEVEIEVAVVEGKEKGPTIVEEAKKRGVALLVLGQRKRSMTWRLVMMWAVNRVG 120

Query: 225 ASVVEYCIENANCMTVAVREKSRT-GGYLITTKHHKDFWQLA 103
             VVEYCI+NA+CM +AVR KS+  GGYLITTK HKDFW LA
Sbjct: 121 GGVVEYCIQNADCMAIAVRRKSKKGGGYLITTKRHKDFWLLA 162


>ref|XP_002311405.1| predicted protein [Populus trichocarpa] gi|222851225|gb|EEE88772.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  213 bits (542), Expect = 4e-53
 Identities = 110/191 (57%), Positives = 140/191 (73%), Gaps = 7/191 (3%)
 Frame = -2

Query: 654 SNIIGDQTKQLDYGVEPGEVVGRRIMIVVDSSLEAKCALQWVLSHGVQSQDTIVLLYVI- 478
           S ++GDQ K  +   +P E++GR+IMIVVDSS+EA+ ALQW LSH VQSQD ++LL+V  
Sbjct: 47  STVVGDQEKPGNSEGKPVELIGRKIMIVVDSSIEAQGALQWSLSHTVQSQDLLILLHVTK 106

Query: 477 -ISKQGK----KSSRNTSRRVYELHSMKNTCLMKRPEVQVEIALVEGKEKAPIIVEEVKK 313
             SKQ      +  R   R    ++S+KN C +KRPE+Q+EIA+VEGKEK P+IVEE KK
Sbjct: 107 ESSKQATGTKTRKERGAPRACELVNSVKNMCQLKRPEIQIEIAVVEGKEKGPLIVEEAKK 166

Query: 312 QGASLLVLGQRKRSIMWHAVMMWRTNRTGASVVEYCIENANCMTVAVREKS-RTGGYLIT 136
           Q  +LLVLGQ+KRS+ W  +MMW +NR    VVEYCI+NA+CM +AVR KS + GGYLIT
Sbjct: 167 QEVALLVLGQKKRSMTWRLIMMWASNRVTGGVVEYCIQNADCMAIAVRRKSQKHGGYLIT 226

Query: 135 TKHHKDFWQLA 103
           TK HKDFW LA
Sbjct: 227 TKRHKDFWLLA 237


>ref|XP_003614248.1| hypothetical protein MTR_5g047050 [Medicago truncatula]
           gi|355515583|gb|AES97206.1| hypothetical protein
           MTR_5g047050 [Medicago truncatula]
          Length = 236

 Score =  211 bits (536), Expect = 2e-52
 Identities = 110/184 (59%), Positives = 133/184 (72%), Gaps = 8/184 (4%)
 Frame = -2

Query: 630 KQLDYGVEPGEVVGRRIMIVVDSSLEAKCALQWVLSHGVQSQDTIVLLYVIISKQGKK-- 457
           ++ D GV+ G VV R+IMIV+DSS EAK ALQW L+H VQ+QDTIVLL+V+     K+  
Sbjct: 53  EKFDDGVKQGSVVSRKIMIVIDSSFEAKGALQWALTHTVQNQDTIVLLHVMKPSNSKQAT 112

Query: 456 ----SSRNTSRRVYEL-HSMKNTCLMKRPEVQVEIALVEGKEKAPIIVEEVKKQGASLLV 292
               SS+ T  R YEL  S KN C +K PEVQ+EIA+ EGKEK P IVEE K+QG +LLV
Sbjct: 113 DDEASSKETDPRAYELASSFKNICNVKMPEVQIEIAVTEGKEKGPKIVEEAKRQGVALLV 172

Query: 291 LGQRKRSIMWHAVMMWRTNRTGASVVEYCIENANCMTVAVREKS-RTGGYLITTKHHKDF 115
           LGQ+KRS  W  +MMW  NR    VVEYCI+NA+CM +AVR KS + GGY+ITTK HKDF
Sbjct: 173 LGQKKRSTTWRLLMMWAGNRVTGGVVEYCIQNAHCMAIAVRRKSKKIGGYMITTKRHKDF 232

Query: 114 WQLA 103
           W LA
Sbjct: 233 WLLA 236


>ref|XP_002512049.1| conserved hypothetical protein [Ricinus communis]
           gi|223549229|gb|EEF50718.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  207 bits (528), Expect = 2e-51
 Identities = 109/181 (60%), Positives = 136/181 (75%), Gaps = 5/181 (2%)
 Frame = -2

Query: 630 KQLDYGVEPGEVVGRRIMIVVDSSLEAKCALQWVLSHGVQSQDTIVLLYVII-SKQG--K 460
           K  D GV+P  + GR+IMIVVDSS EAK AL W LSH VQSQD ++LLYV   SKQ   +
Sbjct: 63  KSGDDGVKPLVINGRKIMIVVDSSFEAKGALLWALSHTVQSQDLVILLYVTKPSKQATSE 122

Query: 459 KSSRNTSRRVYEL-HSMKNTCLMKRPEVQVEIALVEGKEKAPIIVEEVKKQGASLLVLGQ 283
           +SS+    R Y+L +S+KN   ++RPE+Q+E A+VEGKEK P+IVEE KKQG +LLVLGQ
Sbjct: 123 ESSKEKPPRAYDLVNSLKNMSQLRRPEIQIETAVVEGKEKGPLIVEEAKKQGVALLVLGQ 182

Query: 282 RKRSIMWHAVMMWRTNRTGASVVEYCIENANCMTVAVREKSRT-GGYLITTKHHKDFWQL 106
           +KRS+ W  +MMW +N+    VVEYCI+NA+CM +AVR KS+  GGYLITTK HKDFW L
Sbjct: 183 KKRSMTWRLIMMWASNKVTGGVVEYCIQNADCMAIAVRRKSKKHGGYLITTKRHKDFWLL 242

Query: 105 A 103
           A
Sbjct: 243 A 243


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