BLASTX nr result

ID: Coptis23_contig00014906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014906
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [...   126   2e-27
dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare]    124   8e-27
ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817...   124   1e-26
ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycin...   124   1e-26
ref|NP_001236827.1| uncharacterized protein LOC100500102 [Glycin...   123   2e-26

>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
           gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
           TSR2, putative [Ricinus communis]
          Length = 213

 Score =  126 bits (317), Expect = 2e-27
 Identities = 65/113 (57%), Positives = 86/113 (76%)
 Frame = +2

Query: 41  LPQQLNPNNVQIFIEGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFTQSKG 220
           L +QL P +V +F EGI LILSRW+ALQ+AV+NEWGGR SRQ ++ +  DI ++FTQSK 
Sbjct: 15  LTKQLPPESVPLFQEGIFLILSRWSALQLAVENEWGGRGSRQLADQIGFDIFSWFTQSKE 74

Query: 221 PLYIDDLEDLLFVNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFKFIEKL 379
           PLYIDDLE++L       LN ++EDGS+EEVAE+LMI+H+E L   +  IE+L
Sbjct: 75  PLYIDDLENILDEGMIS-LNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQL 126


>dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 191

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/109 (52%), Positives = 79/109 (72%)
 Frame = +2

Query: 53  LNPNNVQIFIEGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFTQSKGPLYI 232
           L+P       EGI L+  RWTALQMAV+N WGGR SR K++ LA+D+L+FFT SKGP Y 
Sbjct: 11  LSPQAAAALQEGIGLVFGRWTALQMAVENGWGGRESRAKADRLAADVLSFFTGSKGPYYY 70

Query: 233 DDLEDLLFVNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFKFIEKL 379
           DDLE+++F +  E+ N   EDGS+ EVAE+++I+H+E L + +  I+KL
Sbjct: 71  DDLEEMMFDSISEFFNADFEDGSVGEVAEQVLIMHEECLQNNYSSIDKL 119


>ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817824 [Glycine max]
          Length = 203

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/111 (56%), Positives = 82/111 (73%)
 Frame = +2

Query: 47  QQLNPNNVQIFIEGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFTQSKGPL 226
           ++L  +++ +F EGI L+L RW+ L  AV+NEWGG  SR K++ LASDIL++FTQSK PL
Sbjct: 5   RRLRGHSIGVFSEGIGLVLFRWSTLLTAVENEWGGHESRVKADQLASDILSWFTQSKEPL 64

Query: 227 YIDDLEDLLFVNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFKFIEKL 379
           YIDDLED+L       LN+ VEDGSIEEVAE+LM++H+E L D F   E L
Sbjct: 65  YIDDLEDILDQGMLS-LNVEVEDGSIEEVAEKLMVMHEEFLEDNFSSFENL 114


>ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycine max]
           gi|255641901|gb|ACU21219.1| unknown [Glycine max]
          Length = 201

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/111 (57%), Positives = 84/111 (75%)
 Frame = +2

Query: 47  QQLNPNNVQIFIEGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFTQSKGPL 226
           ++L+  +V +F EGI L+LSRW+AL+ AV+NEWGGR SR K++ LAS ILN+FT+SK PL
Sbjct: 5   RRLHGQSVGVFNEGICLVLSRWSALRSAVENEWGGRESRLKADQLASGILNWFTRSKEPL 64

Query: 227 YIDDLEDLLFVNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFKFIEKL 379
           YIDDLED+L       LN+ VEDGS+EEVAE+LM++H+E L   F   E L
Sbjct: 65  YIDDLEDILDQGMLS-LNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDL 114


>ref|NP_001236827.1| uncharacterized protein LOC100500102 [Glycine max]
           gi|255629159|gb|ACU14924.1| unknown [Glycine max]
          Length = 190

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/111 (58%), Positives = 82/111 (73%)
 Frame = +2

Query: 47  QQLNPNNVQIFIEGINLILSRWTALQMAVQNEWGGRLSRQKSENLASDILNFFTQSKGPL 226
           ++L   +V +F EGI LILSRW+AL+ AV+NEWGGR SR K++ LA DIL +FTQSK PL
Sbjct: 5   RRLLGQSVGVFNEGICLILSRWSALRSAVENEWGGRESRLKADQLAGDILTWFTQSKEPL 64

Query: 227 YIDDLEDLLFVNTGEYLNMVVEDGSIEEVAEELMILHDELLHDTFKFIEKL 379
           YIDDLED+L       LN+ VEDGS+EEVAE+LM++H+E L   F   E L
Sbjct: 65  YIDDLEDILDQGMLS-LNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDL 114


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