BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014891
         (1455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530951.1| conserved hypothetical protein [Ricinus comm...    64   1e-07
ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif...    63   2e-07
emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]    63   2e-07
ref|XP_003624761.1| F-box protein SKIP24 [Medicago truncatula] g...    61   8e-07
ref|XP_004157990.1| PREDICTED: F-box protein SKIP24-like [Cucumi...    59   3e-06

>ref|XP_002530951.1| conserved hypothetical protein [Ricinus communis]
            gi|223529466|gb|EEF31423.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 261

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
 Frame = -2

Query: 1226 IEALPDEMWIEILEAGIGKLILEREDICSFSMCCKRFNNLSNDNIVWSTLVARDFPRDIL 1047
            +  LPDE+W +I+E GI       +D+C  S+CC+R + LSN++  WS  ++ DFP    
Sbjct: 1    MSGLPDELWRQIIEFGIRSSNFSYKDLCCISICCRRLHRLSNEHSFWSHFLSSDFPPSPQ 60

Query: 1046 SKSIHWSSKKALYIFILEMYIKLERLITRE-TVLSTKLELIQREVEVMTEQIVENAGDFN 870
             +    +     Y    +   K+     RE  V + +  ++++E E+M  +         
Sbjct: 61   QQQHQQNPNPNNYTSTAKSTYKIRFEKEREKKVAAHRRAVLRKESEIMERE--------R 112

Query: 869  MIIDRHFACCEEVDNMKQEHMHIKSEVSLMQA 774
             I D  +  C+E D M+     + +   + QA
Sbjct: 113  KIRDIEYRLCQESDKMRDTANELSNLHKVRQA 144


>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
            gi|296085868|emb|CBI31192.3| unnamed protein product
            [Vitis vinifera]
          Length = 256

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 46/133 (34%), Positives = 65/133 (48%)
 Frame = -2

Query: 1217 LPDEMWIEILEAGIGKLILEREDICSFSMCCKRFNNLSNDNIVWSTLVARDFPRDILSKS 1038
            LPDEMW +ILE GI    L  +D+C  S+ C+R + LSND ++WS L++ DFP    S S
Sbjct: 4    LPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPHTEASVS 63

Query: 1037 IHWSSKKALYIFILEMYIKLERLITRETVLSTKLELIQREVEVMTEQIVENAGDFNMIID 858
                S  +L   ++   IK +R   R      K    +R V  +  QI   AG    + +
Sbjct: 64   NGTVSSSSLSPKLM-YRIKFDRERAR------KAAAHRRAVLRLESQI---AGHLRNLQE 113

Query: 857  RHFACCEEVDNMK 819
                  EE + MK
Sbjct: 114  IQMKLTEETEKMK 126


>emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]
          Length = 256

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 46/133 (34%), Positives = 65/133 (48%)
 Frame = -2

Query: 1217 LPDEMWIEILEAGIGKLILEREDICSFSMCCKRFNNLSNDNIVWSTLVARDFPRDILSKS 1038
            LPDEMW +ILE GI    L  +D+C  S+ C+R + LSND ++WS L++ DFP    S S
Sbjct: 4    LPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPHTEASVS 63

Query: 1037 IHWSSKKALYIFILEMYIKLERLITRETVLSTKLELIQREVEVMTEQIVENAGDFNMIID 858
                S  +L   ++   IK +R   R      K    +R V  +  QI   AG    + +
Sbjct: 64   NGTVSSSSLSPKLM-YRIKFDRERAR------KAAAHRRAVLRLESQI---AGHLRNLQE 113

Query: 857  RHFACCEEVDNMK 819
                  EE + MK
Sbjct: 114  IQMKLTEETEKMK 126


>ref|XP_003624761.1| F-box protein SKIP24 [Medicago truncatula]
            gi|357508969|ref|XP_003624773.1| F-box protein SKIP24
            [Medicago truncatula] gi|355499776|gb|AES80979.1| F-box
            protein SKIP24 [Medicago truncatula]
            gi|355499788|gb|AES80991.1| F-box protein SKIP24
            [Medicago truncatula]
          Length = 135

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 32/78 (41%), Positives = 47/78 (60%)
 Frame = -2

Query: 1226 IEALPDEMWIEILEAGIGKLILEREDICSFSMCCKRFNNLSNDNIVWSTLVARDFPRDIL 1047
            + +LP+E+W  ILE GI K  L  +D+C  S+ C   + LS+D+ +W+ L++ DFP    
Sbjct: 1    MSSLPEELWSRILEIGIEKSSLSYKDLCCISISCHLLHRLSSDDSLWNGLISSDFPSS-- 58

Query: 1046 SKSIHWSSKKALYIFILE 993
            S S   SS K+LY   LE
Sbjct: 59   SASSLASSSKSLYKLRLE 76


>ref|XP_004157990.1| PREDICTED: F-box protein SKIP24-like [Cucumis sativus]
          Length = 243

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
 Frame = -2

Query: 1217 LPDEMWIEILEAGIGKLILEREDICSFSMCCKRFNNLSNDNIVWSTLVARDFPRDILSKS 1038
            LPDE+W +IL+ G+    L  +D+C  S+   R   LS+ + +WS L+  D+P    S  
Sbjct: 4    LPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSSSFP 63

Query: 1037 IHWSSKKALYIFILEMYIKLERLITRETVLSTKLELIQ--REVEVMTEQIVENAG 879
               SS K+LY   LE     ++      VL  + ++ +  R V  + E+++E  G
Sbjct: 64   SSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETG 118