BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014887
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vini...   439   e-121
emb|CBI34744.3| unnamed protein product [Vitis vinifera]              433   e-119
ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vini...   421   e-115
ref|XP_002320090.1| f-box family protein [Populus trichocarpa] g...   413   e-113
ref|XP_002322448.1| f-box family protein [Populus trichocarpa] g...   409   e-111

>ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vinifera]
          Length = 283

 Score =  439 bits (1128), Expect = e-121
 Identities = 203/286 (70%), Positives = 233/286 (81%)
 Frame = -2

Query: 1191 MGAGFSTFSTQINSVTSSSNKTSLGDIPEGCIASILTNLDPPDICKLAKVNRTFRDASTS 1012
            MG G S  + +     S   +  LGD+PE C+A +L+ LDPP+ICKLAK+NR FR AS +
Sbjct: 1    MGTGVSLLACENEGCPS---RPRLGDLPEDCVALVLSYLDPPEICKLAKLNRAFRGASRA 57

Query: 1011 DFIWESKLPSTYQYLIDRLGDGLPSNLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGVCL 832
            D +WE KLPS Y  +I+++    P NL KK+IY RLC+PNPFDGGTK  WL+K TGGVCL
Sbjct: 58   DLVWEPKLPSNYCLVIEKVFKDFPENLCKKEIYARLCQPNPFDGGTKKAWLDKRTGGVCL 117

Query: 831  SISAKGLTITGIDDRRYWNHIPTEESRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMFFR 652
            SIS+KGL ITGIDDRRYW +IPTEESRF+TVAY+QQIWWLEVDGE++F FPAGTYS+FFR
Sbjct: 118  SISSKGLAITGIDDRRYWTYIPTEESRFNTVAYVQQIWWLEVDGEVDFPFPAGTYSIFFR 177

Query: 651  LQLGRASKRLGRRVCNPEHVHGWDVKPVRFQLSTSEGQQAISQCFLDEPGNWINYHVGDF 472
            LQLGRASKRLGRR+CNPEHVHGWD+KPVRFQL TS+GQ A SQCFLDEPG WI YH  DF
Sbjct: 178  LQLGRASKRLGRRICNPEHVHGWDIKPVRFQLWTSDGQHATSQCFLDEPGRWIQYHAADF 237

Query: 471  VVENPTVPTKIKFSMIQIDCTHTKGGLCLDSVLICPSEFRERLKRF 334
            VV+N   PTKIKFSM QIDCTHTKGGLC+DSVLI P EFRERLK F
Sbjct: 238  VVDNSNAPTKIKFSMTQIDCTHTKGGLCVDSVLIYPREFRERLKHF 283


>emb|CBI34744.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  433 bits (1113), Expect = e-119
 Identities = 200/282 (70%), Positives = 230/282 (81%)
 Frame = -2

Query: 1191 MGAGFSTFSTQINSVTSSSNKTSLGDIPEGCIASILTNLDPPDICKLAKVNRTFRDASTS 1012
            MG G S  + +     S   +  LGD+PE C+A +L+ LDPP+ICKLAK+NR FR AS +
Sbjct: 1    MGTGVSLLACENEGCPS---RPRLGDLPEDCVALVLSYLDPPEICKLAKLNRAFRGASRA 57

Query: 1011 DFIWESKLPSTYQYLIDRLGDGLPSNLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGVCL 832
            D +WE KLPS Y  +I+++    P NL KK+IY RLC+PNPFDGGTK  WL+K TGGVCL
Sbjct: 58   DLVWEPKLPSNYCLVIEKVFKDFPENLCKKEIYARLCQPNPFDGGTKKAWLDKRTGGVCL 117

Query: 831  SISAKGLTITGIDDRRYWNHIPTEESRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMFFR 652
            SIS+KGL ITGIDDRRYW +IPTEESRF+TVAY+QQIWWLEVDGE++F FPAGTYS+FFR
Sbjct: 118  SISSKGLAITGIDDRRYWTYIPTEESRFNTVAYVQQIWWLEVDGEVDFPFPAGTYSIFFR 177

Query: 651  LQLGRASKRLGRRVCNPEHVHGWDVKPVRFQLSTSEGQQAISQCFLDEPGNWINYHVGDF 472
            LQLGRASKRLGRR+CNPEHVHGWD+KPVRFQL TS+GQ A SQCFLDEPG WI YH  DF
Sbjct: 178  LQLGRASKRLGRRICNPEHVHGWDIKPVRFQLWTSDGQHATSQCFLDEPGRWIQYHAADF 237

Query: 471  VVENPTVPTKIKFSMIQIDCTHTKGGLCLDSVLICPSEFRER 346
            VV+N   PTKIKFSM QIDCTHTKGGLC+DSVLI P EFRER
Sbjct: 238  VVDNSNAPTKIKFSMTQIDCTHTKGGLCVDSVLIYPREFRER 279


>ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vinifera]
            gi|296089069|emb|CBI38772.3| unnamed protein product
            [Vitis vinifera]
          Length = 289

 Score =  421 bits (1081), Expect = e-115
 Identities = 192/278 (69%), Positives = 221/278 (79%), Gaps = 2/278 (0%)
 Frame = -2

Query: 1191 MGAGFSTFSTQINSVTSSSNKTSLGDIPEGCIASILTNLDPPDICKLAKVNRTFRDASTS 1012
            MGA  S      +   +  ++  LGDIPE C+A +L NLDPP+ICKLA++NR FR AS +
Sbjct: 1    MGANISGIDADTDGDNNPPSRPKLGDIPESCLALVLMNLDPPEICKLARLNRAFRGASAA 60

Query: 1011 DFIWESKLPSTYQYLIDRLG--DGLPSNLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGV 838
            DFIWE+KLP  Y+ LI  L   D    NL KK IY RLCRPNPFDGGTK +WL+K TGGV
Sbjct: 61   DFIWEAKLPPNYRSLIQELKIFDEFSMNLRKKGIYARLCRPNPFDGGTKEVWLDKRTGGV 120

Query: 837  CLSISAKGLTITGIDDRRYWNHIPTEESRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMF 658
            C SIS+K LTITGIDDRRYWNHIPTEESRF TVAYLQQ WW EVDGE EF FP GTYS+F
Sbjct: 121  CFSISSKALTITGIDDRRYWNHIPTEESRFQTVAYLQQTWWFEVDGEFEFRFPPGTYSLF 180

Query: 657  FRLQLGRASKRLGRRVCNPEHVHGWDVKPVRFQLSTSEGQQAISQCFLDEPGNWINYHVG 478
            FRL LGRASKRLGRRVCNPEH+HGWD+KPV+FQL+TSEGQ A+S+C+L+ PGNWI++HVG
Sbjct: 181  FRLHLGRASKRLGRRVCNPEHIHGWDIKPVKFQLTTSEGQHAVSKCYLENPGNWIHHHVG 240

Query: 477  DFVVENPTVPTKIKFSMIQIDCTHTKGGLCLDSVLICP 364
            DFVVE      K+KFS  QIDCTHTKGG+C+DSVLICP
Sbjct: 241  DFVVEQGDTAMKVKFSATQIDCTHTKGGVCVDSVLICP 278


>ref|XP_002320090.1| f-box family protein [Populus trichocarpa]
            gi|222860863|gb|EEE98405.1| f-box family protein [Populus
            trichocarpa]
          Length = 294

 Score =  413 bits (1062), Expect = e-113
 Identities = 186/278 (66%), Positives = 223/278 (80%), Gaps = 1/278 (0%)
 Frame = -2

Query: 1191 MGAGFSTFSTQINSVTSSSNKTSLGDIPEGCIASILTNLDPPDICKLAKVNRTFRDASTS 1012
            MGA  S  +    +    S+K  LGDIPE C+A +L +LDPPDICKLA++NR F  AS++
Sbjct: 1    MGANLSCATLCDTNGEGPSSKPRLGDIPESCLALVLMHLDPPDICKLARLNRAFHGASSA 60

Query: 1011 DFIWESKLPSTYQYLIDR-LGDGLPSNLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGVC 835
            DFIWESKLPS Y+++ ++ L +     L KKD+Y R+CRPNPFDGGTK +WL+K TGG C
Sbjct: 61   DFIWESKLPSNYKFICEKVLDEKTVVGLEKKDVYARMCRPNPFDGGTKEVWLDKKTGGAC 120

Query: 834  LSISAKGLTITGIDDRRYWNHIPTEESRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMFF 655
             SIS+KGL ITGIDDRRYWNHI TEESRFHTVAYLQQIWW E+DGE EF FP G YS+FF
Sbjct: 121  FSISSKGLAITGIDDRRYWNHISTEESRFHTVAYLQQIWWFEIDGEFEFEFPKGMYSLFF 180

Query: 654  RLQLGRASKRLGRRVCNPEHVHGWDVKPVRFQLSTSEGQQAISQCFLDEPGNWINYHVGD 475
            RLQLGR+SKR+GRRVCN EH+HGWD+KPVRFQL+TS+GQ+A S+CFLD PGNW+ YH GD
Sbjct: 181  RLQLGRSSKRMGRRVCNSEHIHGWDIKPVRFQLTTSDGQRAASKCFLDTPGNWVYYHAGD 240

Query: 474  FVVENPTVPTKIKFSMIQIDCTHTKGGLCLDSVLICPS 361
            FVV+ P+   KIKFSM QIDCTHTKGGLC+D+  + PS
Sbjct: 241  FVVDRPSELMKIKFSMTQIDCTHTKGGLCVDAAFVYPS 278


>ref|XP_002322448.1| f-box family protein [Populus trichocarpa]
            gi|222869444|gb|EEF06575.1| f-box family protein [Populus
            trichocarpa]
          Length = 288

 Score =  409 bits (1050), Expect = e-111
 Identities = 186/288 (64%), Positives = 236/288 (81%), Gaps = 2/288 (0%)
 Frame = -2

Query: 1191 MGAGFSTFSTQINSVTSSS-NKTSLGDIPEGCIASILTNLDPPDICKLAKVNRTFRDAST 1015
            MGAG S+ + +    + SS ++ SL D+PE C++SI   LDPP+ICKLAK+N+TF  AS 
Sbjct: 1    MGAGSSSLALESEGGSGSSPSRPSLDDVPECCVSSIFMYLDPPEICKLAKLNKTFHGASL 60

Query: 1014 SDFIWESKLPSTYQYLIDRLGDGLPSNLSKKDIYTRLCRPNPFDGGTKAIWLEKSTGGVC 835
            +DF+WE+KLPS Y++L++++    P +LSKK+IY RLCRPN FD G K +WL+KS+G +C
Sbjct: 61   ADFVWETKLPSNYKFLVEKVLGQSPESLSKKEIYARLCRPNCFDKGAKQVWLDKSSGKIC 120

Query: 834  LSISAKGLTITGIDDRRYWNHIPTEESRFHTVAYLQQIWWLEVDGEIEFHFPAGTYSMFF 655
            +++S K L ITGIDDRRYWNHI +EESRF+T+AYLQQIWW EV GE+EF FPAGTYS+FF
Sbjct: 121  VAVSYKALRITGIDDRRYWNHISSEESRFNTIAYLQQIWWFEVGGELEFEFPAGTYSLFF 180

Query: 654  RLQLGRASKRLGRRVCNPEHVHGWDVKPVRFQLSTSEGQQAISQCFLDEPGNWINYHVGD 475
            RLQLG+ SK+LGRR CN + VHGWD+KPVRFQLSTS GQQA S+C+L + GNW +YH GD
Sbjct: 181  RLQLGKTSKKLGRRTCNVDRVHGWDIKPVRFQLSTSNGQQASSECYLHQQGNWGHYHAGD 240

Query: 474  FVV-ENPTVPTKIKFSMIQIDCTHTKGGLCLDSVLICPSEFRERLKRF 334
            FVV  + T P K++FSM+QIDCTHTKGG+CLDSVLICPSEFRE+LK+F
Sbjct: 241  FVVYSSNTAPLKLRFSMMQIDCTHTKGGVCLDSVLICPSEFREKLKQF 288