BLASTX nr result

ID: Coptis23_contig00014880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014880
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21183.3| unnamed protein product [Vitis vinifera]              350   1e-94
ref|XP_002263074.2| PREDICTED: uncharacterized protein sll0005-l...   349   2e-94
dbj|BAJ88992.1| predicted protein [Hordeum vulgare subsp. vulgare]    347   9e-94
dbj|BAJ87328.1| predicted protein [Hordeum vulgare subsp. vulgare]    347   9e-94
ref|XP_003563163.1| PREDICTED: uncharacterized protein sll0005-l...   347   1e-93

>emb|CBI21183.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  350 bits (897), Expect = 1e-94
 Identities = 170/197 (86%), Positives = 184/197 (93%)
 Frame = -2

Query: 593 GLYCSLRQLLEVGFFHADPHPGNLVATKDGSLAYFDFGMMGEIPRHYRVGLMQVLVHYVN 414
           GLYCSLRQLLEVGFFHADPHPGNLVAT DGSLAYFDFGMMG+IPRHYRVGL+QVLVH+VN
Sbjct: 388 GLYCSLRQLLEVGFFHADPHPGNLVATADGSLAYFDFGMMGDIPRHYRVGLIQVLVHFVN 447

Query: 413 RDSLGLAKDFLSLGFIPDGVNIQSVSGALRKSFGDGARSSHDFQGVIHHLYDVMYEFNFS 234
           RDSLGLA DFLSLGFIP+GV+IQ VS AL+ SFGDG R S DFQ ++  LYD+MYE NFS
Sbjct: 448 RDSLGLANDFLSLGFIPEGVDIQLVSEALQASFGDGTRQSQDFQAIMIQLYDIMYELNFS 507

Query: 233 LPPDYALVIRSLGSLEGTAKALDPDFKVVESAYPFVIGRLLADPNPDMRKILRELVIRND 54
           LPPDYALVIR+LGSLEGTAKALDP FKVVESAYP+VIGRLLADPNPDMRKILREL+IRN+
Sbjct: 508 LPPDYALVIRALGSLEGTAKALDPSFKVVESAYPYVIGRLLADPNPDMRKILRELLIRNN 567

Query: 53  GSIRWNRLERLIAAISE 3
           GSIRWNRLERLIAA+SE
Sbjct: 568 GSIRWNRLERLIAAVSE 584


>ref|XP_002263074.2| PREDICTED: uncharacterized protein sll0005-like [Vitis vinifera]
          Length = 860

 Score =  349 bits (896), Expect = 2e-94
 Identities = 169/197 (85%), Positives = 184/197 (93%)
 Frame = -2

Query: 593  GLYCSLRQLLEVGFFHADPHPGNLVATKDGSLAYFDFGMMGEIPRHYRVGLMQVLVHYVN 414
            GLYCSLRQLLEVGFFHADPHPGNLVAT DGSLAYFDFGMMG+IPRHYRVGL+QVLVH+VN
Sbjct: 495  GLYCSLRQLLEVGFFHADPHPGNLVATADGSLAYFDFGMMGDIPRHYRVGLIQVLVHFVN 554

Query: 413  RDSLGLAKDFLSLGFIPDGVNIQSVSGALRKSFGDGARSSHDFQGVIHHLYDVMYEFNFS 234
            RDSLGLA DFLSLGFIP+GV+IQ VS AL+ SFGDG R S DFQ ++  LYD+MYE NFS
Sbjct: 555  RDSLGLANDFLSLGFIPEGVDIQLVSEALQASFGDGTRQSQDFQAIMIQLYDIMYELNFS 614

Query: 233  LPPDYALVIRSLGSLEGTAKALDPDFKVVESAYPFVIGRLLADPNPDMRKILRELVIRND 54
            LPPDYALVIR+LGSLEGTAKALDP FKVVESAYP+VIGRLLADPNPDMRKILREL+IRN+
Sbjct: 615  LPPDYALVIRALGSLEGTAKALDPSFKVVESAYPYVIGRLLADPNPDMRKILRELLIRNN 674

Query: 53   GSIRWNRLERLIAAISE 3
            GSIRWNRLERL+AA+SE
Sbjct: 675  GSIRWNRLERLVAAVSE 691


>dbj|BAJ88992.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  347 bits (890), Expect = 9e-94
 Identities = 166/197 (84%), Positives = 187/197 (94%)
 Frame = -2

Query: 593 GLYCSLRQLLEVGFFHADPHPGNLVATKDGSLAYFDFGMMGEIPRHYRVGLMQVLVHYVN 414
           GLYCSLRQLLE GFFHADPHPGNLVAT+DGSLAYFDFGMMG+IPRHYRVGL+Q+LVHYVN
Sbjct: 339 GLYCSLRQLLEDGFFHADPHPGNLVATEDGSLAYFDFGMMGDIPRHYRVGLIQMLVHYVN 398

Query: 413 RDSLGLAKDFLSLGFIPDGVNIQSVSGALRKSFGDGARSSHDFQGVIHHLYDVMYEFNFS 234
           RDSLGLA DF SLGF+P+G ++ +V+ ALR +FGDG R S+DFQGV++HLYDVMY+FNFS
Sbjct: 399 RDSLGLANDFHSLGFVPEGTDLHAVATALRVAFGDGKRQSNDFQGVMNHLYDVMYDFNFS 458

Query: 233 LPPDYALVIRSLGSLEGTAKALDPDFKVVESAYPFVIGRLLADPNPDMRKILRELVIRND 54
           LPPDYALVIR+LGSLEGTAKALDPDFKV+ESAYPFVIGRLLADP+PDMRKILREL+I +D
Sbjct: 459 LPPDYALVIRALGSLEGTAKALDPDFKVIESAYPFVIGRLLADPSPDMRKILRELLICDD 518

Query: 53  GSIRWNRLERLIAAISE 3
           GSIRWNRLERLIAAIS+
Sbjct: 519 GSIRWNRLERLIAAISQ 535


>dbj|BAJ87328.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 475

 Score =  347 bits (890), Expect = 9e-94
 Identities = 166/197 (84%), Positives = 187/197 (94%)
 Frame = -2

Query: 593 GLYCSLRQLLEVGFFHADPHPGNLVATKDGSLAYFDFGMMGEIPRHYRVGLMQVLVHYVN 414
           GLYCSLRQLLE GFFHADPHPGNLVAT+DGSLAYFDFGMMG+IPRHYRVGL+Q+LVHYVN
Sbjct: 117 GLYCSLRQLLEDGFFHADPHPGNLVATEDGSLAYFDFGMMGDIPRHYRVGLIQMLVHYVN 176

Query: 413 RDSLGLAKDFLSLGFIPDGVNIQSVSGALRKSFGDGARSSHDFQGVIHHLYDVMYEFNFS 234
           RDSLGLA DF SLGF+P+G ++ +V+ ALR +FGDG R S+DFQGV++HLYDVMY+FNFS
Sbjct: 177 RDSLGLANDFHSLGFVPEGTDLHAVATALRVAFGDGKRQSNDFQGVMNHLYDVMYDFNFS 236

Query: 233 LPPDYALVIRSLGSLEGTAKALDPDFKVVESAYPFVIGRLLADPNPDMRKILRELVIRND 54
           LPPDYALVIR+LGSLEGTAKALDPDFKV+ESAYPFVIGRLLADP+PDMRKILREL+I +D
Sbjct: 237 LPPDYALVIRALGSLEGTAKALDPDFKVIESAYPFVIGRLLADPSPDMRKILRELLICDD 296

Query: 53  GSIRWNRLERLIAAISE 3
           GSIRWNRLERLIAAIS+
Sbjct: 297 GSIRWNRLERLIAAISQ 313


>ref|XP_003563163.1| PREDICTED: uncharacterized protein sll0005-like [Brachypodium
           distachyon]
          Length = 705

 Score =  347 bits (889), Expect = 1e-93
 Identities = 165/197 (83%), Positives = 187/197 (94%)
 Frame = -2

Query: 593 GLYCSLRQLLEVGFFHADPHPGNLVATKDGSLAYFDFGMMGEIPRHYRVGLMQVLVHYVN 414
           GLYCSLRQLLE GFFHADPHPGNLVAT+DGSLAYFDFGMMG+IPRHYRVGL+Q+LVHYVN
Sbjct: 347 GLYCSLRQLLEDGFFHADPHPGNLVATEDGSLAYFDFGMMGDIPRHYRVGLIQMLVHYVN 406

Query: 413 RDSLGLAKDFLSLGFIPDGVNIQSVSGALRKSFGDGARSSHDFQGVIHHLYDVMYEFNFS 234
           RDSLGLA DF SLGF+P+G ++ +++ ALR +FGDG R S+DFQGV++HLYDVMY+FNFS
Sbjct: 407 RDSLGLANDFHSLGFVPEGTDLHAIATALRVAFGDGRRQSNDFQGVMNHLYDVMYDFNFS 466

Query: 233 LPPDYALVIRSLGSLEGTAKALDPDFKVVESAYPFVIGRLLADPNPDMRKILRELVIRND 54
           LPPDYALVIR+LGSLEGTAKALDPDFKV+ESAYPFVIGRLLADP+PDMRKILREL+I +D
Sbjct: 467 LPPDYALVIRALGSLEGTAKALDPDFKVIESAYPFVIGRLLADPSPDMRKILRELLICDD 526

Query: 53  GSIRWNRLERLIAAISE 3
           GSIRWNRLERLIAAIS+
Sbjct: 527 GSIRWNRLERLIAAISQ 543


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