BLASTX nr result

ID: Coptis23_contig00014874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014874
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282860.1| PREDICTED: CAAX prenyl protease 2 [Vitis vin...   386   e-105
ref|XP_003537065.1| PREDICTED: CAAX prenyl protease 2-like [Glyc...   364   3e-98
gb|ADL62870.1| farnesylated protein-converting enzyme 2 [Prunus ...   361   3e-97
ref|XP_004149214.1| PREDICTED: CAAX prenyl protease 2-like [Cucu...   353   6e-95
dbj|BAK07198.1| predicted protein [Hordeum vulgare subsp. vulgare]    348   1e-93

>ref|XP_002282860.1| PREDICTED: CAAX prenyl protease 2 [Vitis vinifera]
            gi|297740101|emb|CBI30283.3| unnamed protein product
            [Vitis vinifera]
          Length = 316

 Score =  386 bits (991), Expect = e-105
 Identities = 189/306 (61%), Positives = 230/306 (75%), Gaps = 21/306 (6%)
 Frame = -1

Query: 1295 LSKSTALIACGSMAILYVAILYSPTLLFRLPKPTSLNTFMIRRFICAIISSLVSVTLSAF 1116
            ++KS A++AC +MA+ YVAILYSPT + RLP P+S   FMIRRFICA ISSLVS+ LSA 
Sbjct: 10   VTKSVAMMACTAMALFYVAILYSPTWVLRLPPPSSFKQFMIRRFICAAISSLVSMLLSAL 69

Query: 1115 -LLPIKSWDVG----AYGIRVDHMCQALLIPLSLTSLVYTGSLFSKV-------KSFQCT 972
             LLP++SW+V      YGIR+DH+ QA++ PLSLTSL+Y GSL  K        K ++  
Sbjct: 70   ILLPMRSWEVSHLFDVYGIRIDHIWQAMVFPLSLTSLMYAGSLLLKSLLIVSSWKQYKNQ 129

Query: 971  G---------NVSQRLFNLIVSVTYDVLAWRNYVVAPLTEELVFRACMIPLLLCGGFKTY 819
            G         NV Q + N + S    +LAWRNYVVAP TEELVFRACMIPLLLCGGFKTY
Sbjct: 130  GRGIAINHVKNVPQNILNWVFSTASSILAWRNYVVAPFTEELVFRACMIPLLLCGGFKTY 189

Query: 818  TIIFLSPVFFSLAHLNHFLELYCQQSYSFIRASLIVGLQLGYTVIFGWYASFLFIRTGHL 639
            ++IFL P+FFSLAHLNH LE Y + + S ++A ++ GLQLGYTVIFG YAS LFIRTGH+
Sbjct: 190  SVIFLCPIFFSLAHLNHLLEFYSKHNRSLLKAFMVAGLQLGYTVIFGSYASLLFIRTGHI 249

Query: 638  VAPVVAHIFCNIMGLPVIYSKTKGLTAVVFVAGTVGFLWLLFPATSPDMYNVRADGCRCW 459
            VAP+VAHIFCN MGLPV++++ KG+ +V FVAG VGFLWLLFP T P +YN R D CRCW
Sbjct: 250  VAPIVAHIFCNFMGLPVLFAQGKGMVSVAFVAGMVGFLWLLFPVTDPALYNDRTDNCRCW 309

Query: 458  HGYCSW 441
            HGYC+W
Sbjct: 310  HGYCTW 315


>ref|XP_003537065.1| PREDICTED: CAAX prenyl protease 2-like [Glycine max]
          Length = 489

 Score =  364 bits (934), Expect = 3e-98
 Identities = 168/305 (55%), Positives = 228/305 (74%), Gaps = 20/305 (6%)
 Frame = -1

Query: 1295 LSKSTALIACGSMAILYVAILYSPTLLFRLPKPTSLNTFMIRRFICAIISSLVSVTLSAF 1116
            +S+  AL+AC +MA+ YVAILY+PT+L RLP P S   +MIRRF+CA++SS++S+ +SA 
Sbjct: 176  VSQPVALMACIAMALFYVAILYAPTVLIRLPPPPSFKAYMIRRFLCAVVSSILSLFISAL 235

Query: 1115 LLPIKSWD----VGAYGIRVDHMCQALLIPLSLTSLVYTGSLFSK--------------- 993
            +LP+++ +     G +GIR DH+ QA+++PL LTSL+Y+GS+F K               
Sbjct: 236  ILPVQTKESRHMFGVFGIRRDHIWQAVVLPLCLTSLMYSGSMFLKCLLLLASWRQHTNSG 295

Query: 992  -VKSFQCTGNVSQRLFNLIVSVTYDVLAWRNYVVAPLTEELVFRACMIPLLLCGGFKTYT 816
               SF       QR  + + +++ ++L WRNYVVAPLTEELVFRACMIPLLLCGG KTY+
Sbjct: 296  AALSFDSCKFALQRFLDWLSAISSNILVWRNYVVAPLTEELVFRACMIPLLLCGGLKTYS 355

Query: 815  IIFLSPVFFSLAHLNHFLELYCQQSYSFIRASLIVGLQLGYTVIFGWYASFLFIRTGHLV 636
            II L P+FFSLAHLNHFLE+Y +Q+Y  ++A++++GLQLGYTV+FG YASFLF+RTGHL+
Sbjct: 356  IILLCPIFFSLAHLNHFLEIYAKQNYRIVKAAMVIGLQLGYTVVFGSYASFLFVRTGHLL 415

Query: 635  APVVAHIFCNIMGLPVIYSKTKGLTAVVFVAGTVGFLWLLFPATSPDMYNVRADGCRCWH 456
            AP+V HI+CN MGLPV+YS+  G+ +V F+ G +GFLWLLFP T P++YN R D C CW 
Sbjct: 416  APLVVHIYCNFMGLPVLYSQRSGIVSVTFIIGFLGFLWLLFPMTGPELYNDRIDNCSCWQ 475

Query: 455  GYCSW 441
             YC+W
Sbjct: 476  RYCTW 480


>gb|ADL62870.1| farnesylated protein-converting enzyme 2 [Prunus persica]
          Length = 327

 Score =  361 bits (926), Expect = 3e-97
 Identities = 178/306 (58%), Positives = 223/306 (72%), Gaps = 20/306 (6%)
 Frame = -1

Query: 1295 LSKSTALIACGSMAILYVAILYSPTLLFRLPKPTSLNTFMIRRFICAIISSLVSVTLSAF 1116
            +SK+ A++AC +MA+ YVAILY+PTL+ RLP P S   FMIRRFICA ISS+VSV +SA 
Sbjct: 22   VSKAVAVVACAAMALFYVAILYAPTLILRLPPPPSFKNFMIRRFICAAISSVVSVVVSAL 81

Query: 1115 LLPIKSWD----VGAYGIRVDHMCQALLIPLSLTSLVYTGSL----------------FS 996
            LLP+KS +    +G YGIR+DH+ QA++ PL+LT+L+Y GSL                F 
Sbjct: 82   LLPMKSREASSLLGVYGIRMDHIWQAVIFPLTLTALMYGGSLVLKSLLLMSALREHMNFG 141

Query: 995  KVKSFQCTGNVSQRLFNLIVSVTYDVLAWRNYVVAPLTEELVFRACMIPLLLCGGFKTYT 816
               SF    N+S+ +     S+  DVL WR YVVAPLTEELVFRACM+PLLLCGGF+  T
Sbjct: 142  GGLSFNNIKNLSEEIVACSRSIASDVLVWRTYVVAPLTEELVFRACMLPLLLCGGFQKST 201

Query: 815  IIFLSPVFFSLAHLNHFLELYCQQSYSFIRASLIVGLQLGYTVIFGWYASFLFIRTGHLV 636
            +IFL P+FFSLAHLNH  ++Y +Q+Y+  +A L +GLQLGYTV+FG YASFLFI+TGH +
Sbjct: 202  VIFLCPIFFSLAHLNHLKDVYSKQNYNLTKAVLAIGLQLGYTVVFGSYASFLFIQTGHFL 261

Query: 635  APVVAHIFCNIMGLPVIYSKTKGLTAVVFVAGTVGFLWLLFPATSPDMYNVRADGCRCWH 456
            AP+VAH FCN MGLPV+ S+ KG+ +V  VAG VGFLWLLFP T P++YN R D C CW 
Sbjct: 262  APLVAHAFCNFMGLPVLVSRGKGIVSVASVAGIVGFLWLLFPMTHPELYNDRTDNCVCWQ 321

Query: 455  GYCSWN 438
            GYCS N
Sbjct: 322  GYCSGN 327


>ref|XP_004149214.1| PREDICTED: CAAX prenyl protease 2-like [Cucumis sativus]
            gi|449500939|ref|XP_004161235.1| PREDICTED: CAAX prenyl
            protease 2-like [Cucumis sativus]
          Length = 313

 Score =  353 bits (906), Expect = 6e-95
 Identities = 170/306 (55%), Positives = 224/306 (73%), Gaps = 20/306 (6%)
 Frame = -1

Query: 1295 LSKSTALIACGSMAILYVAILYSPTLLFRLPKPTSLNTFMIRRFICAIISSLVSVTLSAF 1116
            +SK+ A+ AC +MA+ YVAILY+P L+ RLP P SL  +MIRRF+CA IS+ VSV + A 
Sbjct: 8    ISKAVAVTACTAMALFYVAILYAPALILRLPPPPSLQVYMIRRFLCAFISTAVSVFVCAL 67

Query: 1115 LLPIKSWDVG----AYGIRVDHMCQALLIPLSLTSLVYTGSLFSK----VKSFQ------ 978
            +LPIK  ++     AYG+R +H+ QA++ PLSLTS +Y GS+  K    V S++      
Sbjct: 68   ILPIKKMELSLLLAAYGVRANHIWQAVIFPLSLTSFMYVGSMVLKFLLLVDSWREHMNHG 127

Query: 977  ------CTGNVSQRLFNLIVSVTYDVLAWRNYVVAPLTEELVFRACMIPLLLCGGFKTYT 816
                  C   +  R+ +  +S   ++LAWRNYVVAPLTEELVFRACMIP+LL GGFK  T
Sbjct: 128  GDSLLNCARLLWTRVLDWGLSTVSNILAWRNYVVAPLTEELVFRACMIPILLSGGFKPTT 187

Query: 815  IIFLSPVFFSLAHLNHFLELYCQQSYSFIRASLIVGLQLGYTVIFGWYASFLFIRTGHLV 636
            +IFL P+ FSLAHLNHF+E Y +Q+ +  +A ++VGLQLGYTV+FG YASFLF+RTGHL+
Sbjct: 188  VIFLCPILFSLAHLNHFMEYYSKQNNNLAKAVMVVGLQLGYTVVFGSYASFLFVRTGHLL 247

Query: 635  APVVAHIFCNIMGLPVIYSKTKGLTAVVFVAGTVGFLWLLFPATSPDMYNVRADGCRCWH 456
            AP+VAH+FCN MGLP I+S+ +G+ ++ F+ G VGFLWLLFP TSP ++N R + CRCW 
Sbjct: 248  APLVAHVFCNFMGLPAIFSRGRGVVSLAFLVGMVGFLWLLFPMTSPHLFNERTNNCRCWQ 307

Query: 455  GYCSWN 438
            GYCSWN
Sbjct: 308  GYCSWN 313


>dbj|BAK07198.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 314

 Score =  348 bits (894), Expect = 1e-93
 Identities = 175/304 (57%), Positives = 220/304 (72%), Gaps = 15/304 (4%)
 Frame = -1

Query: 1304 PEQLSKSTALIACGSMAILYVAILYSPTLLFRLPKPTSLNTFMIRRFICAIISSLVSVTL 1125
            P  +    A+ AC SMA+ YVAILY+PTLL RLP  TSL  F  RRF+CA +SS  SV  
Sbjct: 12   PPAIPGKAAVAACASMAVSYVAILYAPTLLLRLPPATSLRAFFHRRFVCAAVSSAASVLA 71

Query: 1124 SAFLLPIKSWD-----VGAYGIRVDHMCQALLIPLSLTSLVYTGSLFSK--VKSFQCTGN 966
            +A LL + S+      +  +GIR DH+ +A++IPL LTSLVY GS  ++  V S  C  +
Sbjct: 72   TAALLGVWSFSDSSKALAVFGIRSDHLLEAVVIPLLLTSLVYAGSFVARLWVMSSSCDTD 131

Query: 965  -------VSQRLFNLIVSVTYDVLAWRNYVVAPLTEELVFRACMIPLLLCGGFKTYTIIF 807
                    +++L   + +   DV+ WRNYVVAP TEELVFRACMIPLLLCGGFK Y IIF
Sbjct: 132  DDGVGVSCTEKLARWMQTSLQDVMVWRNYVVAPFTEELVFRACMIPLLLCGGFKMYNIIF 191

Query: 806  LSPVFFSLAHLNHFLELYCQQSYSFIRASLIVGLQLGYTVIFGWYASFLFIRTGHLVAPV 627
            LSP+FFSLAHLNH  EL+ QQ  +F+R+ LIVG+QLGYTVIFGWYA+FLFIRTG+LV+P+
Sbjct: 192  LSPIFFSLAHLNHLFELH-QQGCNFMRSLLIVGVQLGYTVIFGWYAAFLFIRTGNLVSPI 250

Query: 626  VAHIFCNIMGLPVIYS-KTKGLTAVVFVAGTVGFLWLLFPATSPDMYNVRADGCRCWHGY 450
            V HI CN+MGLP   S +T+G+T++ F+AG++ F  LLFPATSP++YN R DGC CWHGY
Sbjct: 251  VVHILCNMMGLPAFSSPRTRGMTSLAFLAGSISFFCLLFPATSPNLYNARLDGCSCWHGY 310

Query: 449  CSWN 438
            C WN
Sbjct: 311  CRWN 314


Top