BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014873
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, p...    90   2e-16
emb|CBI32284.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|NP_001150682.1| small nucleolar ribonucleoprotein complex su...    87   1e-15
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated...    86   3e-15

>ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223536399|gb|EEF38048.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 525

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/68 (61%), Positives = 54/68 (79%)
 Frame = -3

Query: 207 IGFSSVLEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRYKEA 28
           +G  S+ EPQ++VLRP NFRYF R Q EKP++ D++I RP+K K AEHDKLL+KFR+KEA
Sbjct: 349 MGLGSIGEPQRRVLRPTNFRYFHRSQGEKPNEGDYLILRPKKVKLAEHDKLLKKFRHKEA 408

Query: 27  LVSALNRK 4
            VS L+ K
Sbjct: 409 FVSVLSGK 416


>emb|CBI32284.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/65 (63%), Positives = 54/65 (83%)
 Frame = -3

Query: 198 SSVLEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRYKEALVS 19
           S ++EPQ++VLRP+ FRYF R Q EKPS+ D++I RP+K K AEHDKLL+KFR+K+A VS
Sbjct: 287 SRLIEPQRRVLRPSYFRYFHRSQGEKPSEGDYLITRPKKVKIAEHDKLLKKFRHKDAFVS 346

Query: 18  ALNRK 4
           AL+ K
Sbjct: 347 ALSGK 351


>ref|NP_001150682.1| small nucleolar ribonucleoprotein complex subunit [Zea mays]
           gi|195641034|gb|ACG39985.1| small nucleolar
           ribonucleoprotein complex subunit [Zea mays]
           gi|414884040|tpg|DAA60054.1| TPA: hypothetical protein
           ZEAMMB73_024666 [Zea mays]
          Length = 537

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/58 (72%), Positives = 49/58 (84%)
 Frame = -3

Query: 186 EPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRYKEALVSAL 13
           EP+K VLRPN FRYF RGQ+EK  + D VIE+P+K K AEHDKLLRKFR+K+ALVSAL
Sbjct: 369 EPEKSVLRPNYFRYFRRGQNEKAKEGDFVIEKPKKVKYAEHDKLLRKFRHKDALVSAL 426


>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = -3

Query: 195 SVLEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRYKEALVSA 16
           SV EPQ++ LRP  FRYF R Q EKP++ DH+I RP+K K +EHDKLL+KFR+KEALVS 
Sbjct: 362 SVEEPQRRALRPTYFRYFHRSQGEKPNEGDHLIMRPKKVKLSEHDKLLKKFRHKEALVSV 421

Query: 15  LNRK 4
           L+ K
Sbjct: 422 LSGK 425


>ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Vitis vinifera]
          Length = 528

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -3

Query: 186 EPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRYKEALVSALNR 7
           EPQ++VLRP+ FRYF R Q EKPS+ D++I RP+K K AEHDKLL+KFR+K+A VSAL+ 
Sbjct: 359 EPQRRVLRPSYFRYFHRSQGEKPSEGDYLITRPKKVKIAEHDKLLKKFRHKDAFVSALSG 418

Query: 6   K 4
           K
Sbjct: 419 K 419