BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014872
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001150682.1| small nucleolar ribonucleoprotein complex su...    92   3e-17
ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, p...    92   4e-17
ref|XP_003557367.1| PREDICTED: U3 small nucleolar RNA-associated...    89   4e-16
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
dbj|BAJ91853.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   1e-15

>ref|NP_001150682.1| small nucleolar ribonucleoprotein complex subunit [Zea mays]
           gi|195641034|gb|ACG39985.1| small nucleolar
           ribonucleoprotein complex subunit [Zea mays]
           gi|414884040|tpg|DAA60054.1| TPA: hypothetical protein
           ZEAMMB73_024666 [Zea mays]
          Length = 537

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = -3

Query: 182 PEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSAL 6
           PEP+K VLRPN FRYF RGQ+EK  + D VIE+P+K K AEHDKLLRKFRHK+ALVSAL
Sbjct: 368 PEPEKSVLRPNYFRYFRRGQNEKAKEGDFVIEKPKKVKYAEHDKLLRKFRHKDALVSAL 426


>ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223536399|gb|EEF38048.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 525

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/66 (63%), Positives = 53/66 (80%)
 Frame = -3

Query: 200 IGFSSVPEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEA 21
           +G  S+ EPQ++VLRP NFRYF R Q EKP++ D++I RP+K K AEHDKLL+KFRHKEA
Sbjct: 349 MGLGSIGEPQRRVLRPTNFRYFHRSQGEKPNEGDYLILRPKKVKLAEHDKLLKKFRHKEA 408

Query: 20  LVSALN 3
            VS L+
Sbjct: 409 FVSVLS 414


>ref|XP_003557367.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Brachypodium distachyon]
          Length = 531

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -3

Query: 182 PEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSAL 6
           P+P+K+VLR  N+RYF RGQ+EKP + D VIE+P+K K AEHDKLLRKF HKEALVSAL
Sbjct: 362 PKPEKKVLRSGNYRYFLRGQNEKPREGDFVIEKPKKVKFAEHDKLLRKFMHKEALVSAL 420


>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/62 (66%), Positives = 50/62 (80%)
 Frame = -3

Query: 188 SVPEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSA 9
           SV EPQ++ LRP  FRYF R Q EKP++ DH+I RP+K K +EHDKLL+KFRHKEALVS 
Sbjct: 362 SVEEPQRRALRPTYFRYFHRSQGEKPNEGDHLIMRPKKVKLSEHDKLLKKFRHKEALVSV 421

Query: 8   LN 3
           L+
Sbjct: 422 LS 423


>dbj|BAJ91853.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 535

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/61 (67%), Positives = 50/61 (81%)
 Frame = -3

Query: 188 SVPEPQKQVLRPNNFRYFSRGQSEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSA 9
           + P+P+KQ L+P+ +RYF RGQ+EK  + D VI RP+K K AEHDKLLRKFRHKEALVSA
Sbjct: 361 TTPKPEKQALKPSYYRYFLRGQNEKAKQGDFVISRPKKVKFAEHDKLLRKFRHKEALVSA 420

Query: 8   L 6
           L
Sbjct: 421 L 421