BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014859
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|2...   431   e-119
emb|CBI21248.3| unnamed protein product [Vitis vinifera]              430   e-118
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   430   e-118
ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arab...   427   e-118
gb|AAN72199.1| putative helicase [Arabidopsis thaliana]               426   e-117

>ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|222861200|gb|EEE98742.1|
            predicted protein [Populus trichocarpa]
          Length = 817

 Score =  431 bits (1109), Expect = e-119
 Identities = 215/239 (89%), Positives = 234/239 (97%)
 Frame = -2

Query: 719  GSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 540
            G+RVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS
Sbjct: 380  GNRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 439

Query: 539  LISTPPPERVPIKTHLSAYNEEKVLSAIKFELDRGGKVFYVLPRIKGLEEVKEFLEKSFP 360
            LISTPPPERVPIKTHLSAYN++K++SAIK+ELDRGG+VFYVLPRIKGLEEVK+FLE+SFP
Sbjct: 440  LISTPPPERVPIKTHLSAYNKDKLISAIKYELDRGGQVFYVLPRIKGLEEVKDFLEQSFP 499

Query: 359  DVDIALAHGKQYSKQLEETMENFAQGETKILICTNIVESGLDIQDANTIIIQDVHQFGLA 180
            +V+IA+AHG+QYSKQLE+TME FAQGE KILICTNIVESGLDIQ+ANTIIIQDV  FGLA
Sbjct: 500  NVEIAVAHGQQYSKQLEDTMEQFAQGEIKILICTNIVESGLDIQNANTIIIQDVQLFGLA 559

Query: 179  QLYQLRGRVGRADKEAHAHLYYPDKSLLSDQALERLTALEECRDLGQGFQLAERDMGIR 3
            QLYQLRGRVGRADKEAHAHL+YPDKS+L+DQALERL ALEECR+LGQGFQLAERDMGIR
Sbjct: 560  QLYQLRGRVGRADKEAHAHLFYPDKSMLTDQALERLAALEECRELGQGFQLAERDMGIR 618


>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  430 bits (1106), Expect = e-118
 Identities = 217/239 (90%), Positives = 232/239 (97%)
 Frame = -2

Query: 719 GSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 540
           G+RVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS
Sbjct: 203 GNRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 262

Query: 539 LISTPPPERVPIKTHLSAYNEEKVLSAIKFELDRGGKVFYVLPRIKGLEEVKEFLEKSFP 360
           LISTPPPERVPI THLSAYN+EK++SAIKFEL RGG++FYVLPRIKGLEEV EFLE SFP
Sbjct: 263 LISTPPPERVPIITHLSAYNKEKIISAIKFELGRGGQIFYVLPRIKGLEEVMEFLECSFP 322

Query: 359 DVDIALAHGKQYSKQLEETMENFAQGETKILICTNIVESGLDIQDANTIIIQDVHQFGLA 180
           DV+IA+AHGKQYSKQLEETM+ FAQGE KILICTNIVESGLDIQ+ANTIIIQ+V QFGLA
Sbjct: 323 DVEIAIAHGKQYSKQLEETMDRFAQGEIKILICTNIVESGLDIQNANTIIIQEVQQFGLA 382

Query: 179 QLYQLRGRVGRADKEAHAHLYYPDKSLLSDQALERLTALEECRDLGQGFQLAERDMGIR 3
           QLYQLRGRVGRADKEAHA+L+YPDKSLLSDQALERL+ALEECRDLGQGFQLAERDMGIR
Sbjct: 383 QLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLSALEECRDLGQGFQLAERDMGIR 441


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis vinifera]
          Length = 823

 Score =  430 bits (1106), Expect = e-118
 Identities = 217/239 (90%), Positives = 232/239 (97%)
 Frame = -2

Query: 719  GSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 540
            G+RVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS
Sbjct: 386  GNRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 445

Query: 539  LISTPPPERVPIKTHLSAYNEEKVLSAIKFELDRGGKVFYVLPRIKGLEEVKEFLEKSFP 360
            LISTPPPERVPI THLSAYN+EK++SAIKFEL RGG++FYVLPRIKGLEEV EFLE SFP
Sbjct: 446  LISTPPPERVPIITHLSAYNKEKIISAIKFELGRGGQIFYVLPRIKGLEEVMEFLECSFP 505

Query: 359  DVDIALAHGKQYSKQLEETMENFAQGETKILICTNIVESGLDIQDANTIIIQDVHQFGLA 180
            DV+IA+AHGKQYSKQLEETM+ FAQGE KILICTNIVESGLDIQ+ANTIIIQ+V QFGLA
Sbjct: 506  DVEIAIAHGKQYSKQLEETMDRFAQGEIKILICTNIVESGLDIQNANTIIIQEVQQFGLA 565

Query: 179  QLYQLRGRVGRADKEAHAHLYYPDKSLLSDQALERLTALEECRDLGQGFQLAERDMGIR 3
            QLYQLRGRVGRADKEAHA+L+YPDKSLLSDQALERL+ALEECRDLGQGFQLAERDMGIR
Sbjct: 566  QLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLSALEECRDLGQGFQLAERDMGIR 624


>ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arabidopsis lyrata subsp.
            lyrata] gi|297330086|gb|EFH60505.1| hypothetical protein
            ARALYDRAFT_477305 [Arabidopsis lyrata subsp. lyrata]
          Length = 823

 Score =  427 bits (1099), Expect = e-118
 Identities = 214/239 (89%), Positives = 232/239 (97%)
 Frame = -2

Query: 719  GSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 540
            GSRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS
Sbjct: 386  GSRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 445

Query: 539  LISTPPPERVPIKTHLSAYNEEKVLSAIKFELDRGGKVFYVLPRIKGLEEVKEFLEKSFP 360
            LISTPPPER+PIKTHLS++ +EKV+ AIK ELDRGG+VFYVLPRIKGLEEV +FLE++FP
Sbjct: 446  LISTPPPERIPIKTHLSSFRKEKVIEAIKNELDRGGQVFYVLPRIKGLEEVMDFLEEAFP 505

Query: 359  DVDIALAHGKQYSKQLEETMENFAQGETKILICTNIVESGLDIQDANTIIIQDVHQFGLA 180
            D+DIA+AHGKQYSKQLEETME FAQG+ KILICTNIVESGLDIQ+ANTIIIQDV QFGLA
Sbjct: 506  DIDIAMAHGKQYSKQLEETMERFAQGKIKILICTNIVESGLDIQNANTIIIQDVQQFGLA 565

Query: 179  QLYQLRGRVGRADKEAHAHLYYPDKSLLSDQALERLTALEECRDLGQGFQLAERDMGIR 3
            QLYQLRGRVGRADKEAHA+L+YPDKSLLSDQALERL+ALEECR+LGQGFQLAERDMGIR
Sbjct: 566  QLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLSALEECRELGQGFQLAERDMGIR 624


>gb|AAN72199.1| putative helicase [Arabidopsis thaliana]
          Length = 822

 Score =  426 bits (1096), Expect = e-117
 Identities = 213/239 (89%), Positives = 232/239 (97%)
 Frame = -2

Query: 719  GSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 540
            GSRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS
Sbjct: 385  GSRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDAS 444

Query: 539  LISTPPPERVPIKTHLSAYNEEKVLSAIKFELDRGGKVFYVLPRIKGLEEVKEFLEKSFP 360
            LISTPPPER+PIKTHLS++ +EKV+ AIK ELDRGG+VFYVLPRIKGLEEV +FLE++FP
Sbjct: 445  LISTPPPERIPIKTHLSSFRKEKVIEAIKNELDRGGQVFYVLPRIKGLEEVMDFLEEAFP 504

Query: 359  DVDIALAHGKQYSKQLEETMENFAQGETKILICTNIVESGLDIQDANTIIIQDVHQFGLA 180
            D+DIA+AHGKQYSKQLEETME FAQG+ KILICTNIVESGLDIQ+ANTIIIQDV QFGLA
Sbjct: 505  DIDIAMAHGKQYSKQLEETMERFAQGKIKILICTNIVESGLDIQNANTIIIQDVQQFGLA 564

Query: 179  QLYQLRGRVGRADKEAHAHLYYPDKSLLSDQALERLTALEECRDLGQGFQLAERDMGIR 3
            QLYQLRGRVGRADKEAHA+L+YPDKSLLSDQALERL+ALEECR+LGQGFQLAE+DMGIR
Sbjct: 565  QLYQLRGRVGRADKEAHAYLFYPDKSLLSDQALERLSALEECRELGQGFQLAEKDMGIR 623