BLASTX nr result

ID: Coptis23_contig00014852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014852
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276787.1| PREDICTED: uncharacterized protein LOC100245...   124   3e-26
ref|XP_003601757.1| hypothetical protein MTR_3g085060 [Medicago ...   104   4e-20
ref|NP_001237431.1| uncharacterized protein LOC100306350 [Glycin...   100   6e-19
gb|AFK36470.1| unknown [Lotus japonicus]                               97   9e-18
ref|XP_002514899.1| conserved hypothetical protein [Ricinus comm...    95   3e-17

>ref|XP_002276787.1| PREDICTED: uncharacterized protein LOC100245446 [Vitis vinifera]
           gi|297738470|emb|CBI27671.3| unnamed protein product
           [Vitis vinifera]
          Length = 196

 Score =  124 bits (312), Expect = 3e-26
 Identities = 73/151 (48%), Positives = 95/151 (62%), Gaps = 12/151 (7%)
 Frame = +2

Query: 221 VPPAEIKEPSSAAVRV----ANETSAGSSGESKEIQTEDILSELRKVKRQNSITHWLLSV 388
           V P E+  P+   + V     NE  AGS+    EI TE+I+ EL+KV+RQNSITHWLLS 
Sbjct: 54  VEPNELHSPAVGEMEVKSMATNEVDAGSA----EIGTEEIIKELKKVERQNSITHWLLST 109

Query: 389 LIILTAAWQYSEVSLIMKVKNNLTHPFRSVENMI--------TNAQDALKHFDGHEPFDA 544
           +I+L   WQ SE SLI+KVK  L HPFRS  N++         N QDA K         +
Sbjct: 110 MIVLILGWQLSEFSLILKVKEGLNHPFRSFGNLVIGLLKGPDNNGQDAEKQ------SSS 163

Query: 545 SKQAQIASPSVPALKIPDLPNMDLPVLGLNG 637
           +K+ QI +P +P L+IP+LP++DLPVLGLNG
Sbjct: 164 TKKPQIETPPLP-LRIPELPHVDLPVLGLNG 193


>ref|XP_003601757.1| hypothetical protein MTR_3g085060 [Medicago truncatula]
           gi|355490805|gb|AES72008.1| hypothetical protein
           MTR_3g085060 [Medicago truncatula]
          Length = 184

 Score =  104 bits (259), Expect = 4e-20
 Identities = 54/128 (42%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
 Frame = +2

Query: 248 SSAAVRVANETSAGSSGESKEIQTEDILSELRKVKRQNSITHWLLSVLIILTAAWQYSEV 427
           +S+ ++  +     + GE+ +   ++I+ EL+KVK+QN +TH LLS +I+LT AWQ SEV
Sbjct: 59  ASSPLKQVDSAIEKTKGETADGDKDEIIKELKKVKKQNFVTHCLLSAMIVLTVAWQLSEV 118

Query: 428 SLIMKVKNNLTHPFRSVENMITNAQDALKHFDGHEPFDAS-KQAQIASPSVPALKIPDLP 604
           SL+M+VK+ + HPFRSV NM    ++ +K   G    DA+  +    S S+P+LKIPD+ 
Sbjct: 119 SLVMRVKDGMNHPFRSVGNMF---KEMVKDVSGSNGQDAAGDKENNESTSLPSLKIPDMT 175

Query: 605 NMDLPVLG 628
           N+D+P  G
Sbjct: 176 NVDVPNFG 183


>ref|NP_001237431.1| uncharacterized protein LOC100306350 [Glycine max]
           gi|255628275|gb|ACU14482.1| unknown [Glycine max]
          Length = 188

 Score =  100 bits (249), Expect = 6e-19
 Identities = 52/116 (44%), Positives = 79/116 (68%)
 Frame = +2

Query: 254 AAVRVANETSAGSSGESKEIQTEDILSELRKVKRQNSITHWLLSVLIILTAAWQYSEVSL 433
           A++    E+    +GESK  + ++I+ EL+K+KRQN +TH LLSV+I+LT AWQ SEVSL
Sbjct: 71  ASITQETESENEDAGESKGSENDEIIKELKKLKRQNFVTHCLLSVMIVLTVAWQLSEVSL 130

Query: 434 IMKVKNNLTHPFRSVENMITNAQDALKHFDGHEPFDASKQAQIASPSVPALKIPDL 601
           I+KVK+ ++HPFRS  NM+      + + +G E  D  K+    SPS+P++ IP++
Sbjct: 131 ILKVKDGISHPFRSFGNML-KGMVKVPNMNGQEADD--KEHPSESPSIPSMIIPNM 183


>gb|AFK36470.1| unknown [Lotus japonicus]
          Length = 191

 Score = 96.7 bits (239), Expect = 9e-18
 Identities = 54/142 (38%), Positives = 90/142 (63%)
 Frame = +2

Query: 200 ADTNILRVPPAEIKEPSSAAVRVANETSAGSSGESKEIQTEDILSELRKVKRQNSITHWL 379
           ++ + L  P A + E + +  + A E      G S+  + ++I+ EL+KVK+QN +TH L
Sbjct: 57  SEASTLSEPEASVPERTVSKNKDAGEVE----GRSRGSEIDEIVKELKKVKKQNFVTHCL 112

Query: 380 LSVLIILTAAWQYSEVSLIMKVKNNLTHPFRSVENMITNAQDALKHFDGHEPFDASKQAQ 559
           LSV+I+LTAAWQ S+VS+++KV++ L HPFRS  +MI      +   +G EP D    A+
Sbjct: 113 LSVMIVLTAAWQLSQVSMMLKVRDGLNHPFRSFGSMIKRM--VVPEINGQEPDDKEHPAE 170

Query: 560 IASPSVPALKIPDLPNMDLPVL 625
             SPS  ++ +P++P++++P L
Sbjct: 171 -QSPS--SINMPEMPSINVPSL 189


>ref|XP_002514899.1| conserved hypothetical protein [Ricinus communis]
           gi|223545950|gb|EEF47453.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 186

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 58/135 (42%), Positives = 81/135 (60%)
 Frame = +2

Query: 242 EPSSAAVRVANETSAGSSGESKEIQTEDILSELRKVKRQNSITHWLLSVLIILTAAWQYS 421
           E  SA+V   +E      G S EI  E+I+ EL+ VKRQN +TH LLS LI++T AWQ S
Sbjct: 63  EADSASVEKPDE----EVGSSTEIGAEEIVKELKHVKRQNIVTHCLLSALIVITVAWQVS 118

Query: 422 EVSLIMKVKNNLTHPFRSVENMITNAQDALKHFDGHEPFDASKQAQIASPSVPALKIPDL 601
           EVSLI+K+K+  THPF+S  +++      +    G    DA K  +    S P L +P+L
Sbjct: 119 EVSLILKLKDGFTHPFKSFGSVLA----GMIKLPGANTKDAEKDKEHTEASSP-LHMPEL 173

Query: 602 PNMDLPVLGLNGGEK 646
           P+  +P LGL+G +K
Sbjct: 174 PH--IPDLGLHGDKK 186


Top