BLASTX nr result

ID: Coptis23_contig00014849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014849
         (1839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510700.1| hypothetical protein RCOM_1601660 [Ricinus c...   678   0.0  
ref|XP_002273276.1| PREDICTED: F-box/kelch-repeat protein At5g42...   677   0.0  
ref|XP_002307801.1| predicted protein [Populus trichocarpa] gi|2...   649   0.0  
ref|XP_004144244.1| PREDICTED: F-box/kelch-repeat protein At5g42...   644   0.0  
ref|XP_004158287.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-...   637   e-180

>ref|XP_002510700.1| hypothetical protein RCOM_1601660 [Ricinus communis]
            gi|223551401|gb|EEF52887.1| hypothetical protein
            RCOM_1601660 [Ricinus communis]
          Length = 583

 Score =  678 bits (1749), Expect = 0.0
 Identities = 322/496 (64%), Positives = 385/496 (77%), Gaps = 4/496 (0%)
 Frame = -1

Query: 1719 SGRRKSNAGEEGKRYQPICGSEDIRVDCFSYGAAERIWKKNSRKDKAAEEPTPNNIMEFF 1540
            S RR S+A EEGK Y+PICG+E+  VDCFS+G  E  WKKN+RKD   E+   N+ +  F
Sbjct: 82   SRRRSSSASEEGKGYKPICGTEESGVDCFSHGVREMFWKKNNRKDFELEDSVQNSRLHIF 141

Query: 1539 LPDEILELCLVRLPMTTLMTARLVCKKWRCLTSTGRFVRMRQE--YQTPWLFLFGVIKDG 1366
            LPD+ILELCLVRLP+ +LM ARLVCKKWRCLT+T RF++MRQE  YQ PWLFLFG +KDG
Sbjct: 142  LPDDILELCLVRLPLISLMNARLVCKKWRCLTTTPRFLQMRQEGLYQNPWLFLFGAVKDG 201

Query: 1365 YCSGHIHALDTSFDQWHKINCDILRGRFQFSVATVGEDVYVVGGCSSLMNFGRVDKRSFK 1186
            +CSG IHALD S D WH+I+ DILRGRF FSVA++ ED+Y+VGGCSSL +FGRVD+ S K
Sbjct: 202  FCSGEIHALDVSQDHWHRIDSDILRGRFMFSVASIQEDIYIVGGCSSLTHFGRVDRSSCK 261

Query: 1185 THKGVLVFSPVARSWRKVAPMKSARSSSILGVLEINSNSAIFRSQKDRHDHRFTRTRVGG 1006
            THKGVLVFSP+ +SWRKVA M+ ARS  ILG+ E++S+ +I  + + RH+ RF R+R+GG
Sbjct: 262  THKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSSDFSIGHNHQHRHERRFPRSRIGG 321

Query: 1005 ISDVYEDPHRLSVRRQLEDA--QSEVSIEHTRNPYKFLKSECTLSNPKGVRRFALIVVGG 832
            +SDVYEDPHRLS+RR   +A  ++E S  H+R  YKF++ +   SN KG +RF LI VGG
Sbjct: 322  VSDVYEDPHRLSLRRHYRNAIDENEASSLHSRKSYKFIRQKSDQSNAKGCKRFVLIAVGG 381

Query: 831  LGSWDEPLDSGEIYDPVTNKWIDIGRLPGDFGIVCSGAACKGLFYVCSESDKLAAYDLER 652
            LGSWDEPLDSGEIYDPV+NKW +I +L  DFG+VCSG  C G+FYV SE+DKL  YD+ER
Sbjct: 382  LGSWDEPLDSGEIYDPVSNKWTEIQKLSIDFGVVCSGVICNGIFYVYSETDKLMGYDIER 441

Query: 651  CTWFGIQTSQSPPRLHEYYPKLISCCGRLLMLSVSWCEQDDLSDLRKKAVRKLYELDLAK 472
              W  IQT   PPR+HEYYPKL+SC  RL MLSVSWCE D     R KAVRKL+ELDL  
Sbjct: 442  GFWVAIQTFPFPPRVHEYYPKLVSCNSRLFMLSVSWCEGDGQIGQRNKAVRKLWELDLMY 501

Query: 471  LKWKEVSKHPDAPMDWNAVFVEDRGKVYGVEMFKIFGQVLDFLTVCEVTDLRLQWSRISR 292
            L W EVS HPDAPMDWNA FV D+  ++GVEMFKIFGQVLDFLTVC V+D    WS ISR
Sbjct: 502  LTWTEVSVHPDAPMDWNAAFVADKNLIFGVEMFKIFGQVLDFLTVCYVSDTGTNWSHISR 561

Query: 291  KHMAHELDASSCVTKS 244
             HM HELDASSC+TKS
Sbjct: 562  NHMTHELDASSCITKS 577


>ref|XP_002273276.1| PREDICTED: F-box/kelch-repeat protein At5g42350-like [Vitis vinifera]
          Length = 580

 Score =  677 bits (1748), Expect = 0.0
 Identities = 326/499 (65%), Positives = 390/499 (78%), Gaps = 4/499 (0%)
 Frame = -1

Query: 1728 GYGSGRRKSNAGEEGKRYQPICGSEDIRVDCFSYGAAERIWKKNSRKDKAAEEPTPNNIM 1549
            G  S RR+S+A ++GK Y+ ICG E+  VDCFSYG  ++ WK+N+RKD   EE   N+ M
Sbjct: 76   GDPSSRRRSSASDDGKGYKTICGVEETGVDCFSYGVKDKFWKRNNRKDLEVEELQQNSRM 135

Query: 1548 EFFLPDEILELCLVRLPMTTLMTARLVCKKWRCLTSTGRFVRMRQE--YQTPWLFLFGVI 1375
              FLPD+ILELCLVRLP+T+LM ARLVCKKWR LT+T RF++MR+E  +Q PWLFLFG +
Sbjct: 136  HLFLPDDILELCLVRLPLTSLMNARLVCKKWRYLTTTPRFMQMRKEGLHQNPWLFLFGAV 195

Query: 1374 KDGYCSGHIHALDTSFDQWHKINCDILRGRFQFSVATVGEDVYVVGGCSSLMNFGRVDKR 1195
            KDGYCSG IHALD S D+WH+++ DIL+GRF FSVA++ + VY+VGGCSSL +FGRVD+ 
Sbjct: 196  KDGYCSGEIHALDVSLDEWHRVDADILKGRFLFSVASIQDSVYIVGGCSSLTSFGRVDRS 255

Query: 1194 SFKTHKGVLVFSPVARSWRKVAPMKSARSSSILGVLEINSNSAIFRSQKDRHDHRFTRTR 1015
            SFKTHKGVLVFS + +SWRKVA MK ARSS ILG+ E+ S+  I RSQ++R D RF RTR
Sbjct: 256  SFKTHKGVLVFSALTKSWRKVASMKHARSSPILGISEVGSDCLIVRSQQNRQDRRFPRTR 315

Query: 1014 VGGISDVYEDPHRLSVRRQLEDA--QSEVSIEHTRNPYKFLKSECTLSNPKGVRRFALIV 841
            +GG+SDVYEDPHRLS+RR+      ++E+S    R   KF++ +  LSN    RRF LI 
Sbjct: 316  IGGVSDVYEDPHRLSLRREPGSGFNENEISSLPHRKQGKFVRQKGDLSNTTDCRRFVLIA 375

Query: 840  VGGLGSWDEPLDSGEIYDPVTNKWIDIGRLPGDFGIVCSGAACKGLFYVCSESDKLAAYD 661
            VGGLGSWDEPLDSGEIYD V+NKW++I RLP DFGIVCSG  C G+FYV SE+DKLA YD
Sbjct: 376  VGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGIVCSGVVCNGMFYVYSETDKLAGYD 435

Query: 660  LERCTWFGIQTSQSPPRLHEYYPKLISCCGRLLMLSVSWCEQDDLSDLRKKAVRKLYELD 481
            +ER  W GIQ + SPPR+HEYYPKL+SC GRL MLSVSWCE D     R KAVRKL+ELD
Sbjct: 436  IERGFWVGIQITPSPPRVHEYYPKLVSCNGRLFMLSVSWCEGDGQIGRRNKAVRKLWELD 495

Query: 480  LAKLKWKEVSKHPDAPMDWNAVFVEDRGKVYGVEMFKIFGQVLDFLTVCEVTDLRLQWSR 301
            L  L W EVS HPDAPMDWNA FV DR  ++GVEMFKIFGQVLDFLTVC+V+D    WS 
Sbjct: 496  LMYLTWTEVSIHPDAPMDWNAAFVADRNLIFGVEMFKIFGQVLDFLTVCDVSDKGTNWSH 555

Query: 300  ISRKHMAHELDASSCVTKS 244
            ISR H+AHELDASSC+TKS
Sbjct: 556  ISRNHVAHELDASSCMTKS 574


>ref|XP_002307801.1| predicted protein [Populus trichocarpa] gi|222857250|gb|EEE94797.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  649 bits (1675), Expect = 0.0
 Identities = 310/500 (62%), Positives = 378/500 (75%), Gaps = 5/500 (1%)
 Frame = -1

Query: 1728 GYGSGRRKSN-AGEEGKRYQPICGSEDIRVDCFSYGAAERIWKKNSRKDKAAEEPTPNNI 1552
            G  SGRR+S+ A EEGK Y+PICG+E+   DCFSYG  E+ WKKNSRKD   E+   N+ 
Sbjct: 76   GDPSGRRRSSSASEEGKGYRPICGNEETGFDCFSYGMREKFWKKNSRKDLELEDLIQNSR 135

Query: 1551 MEFFLPDEILELCLVRLPMTTLMTARLVCKKWRCLTSTGRFVRMRQE--YQTPWLFLFGV 1378
            +  FLPD++LELCLVRLP+T+LM ARLVCKKWR LT+T RF++MR+E  Y  PWLFLFG 
Sbjct: 136  LHMFLPDDVLELCLVRLPLTSLMNARLVCKKWRYLTTTPRFLQMRREGPYLNPWLFLFGA 195

Query: 1377 IKDGYCSGHIHALDTSFDQWHKINCDILRGRFQFSVATVGEDVYVVGGCSSLMNFGRVDK 1198
            +KDGYCSG I+ALD   DQWH+I+ DIL+GRF FSVA+  +D+YVVGGCSSL +FGRVD+
Sbjct: 196  VKDGYCSGDIYALDVYQDQWHRIDSDILKGRFMFSVASFQDDIYVVGGCSSLTHFGRVDR 255

Query: 1197 RSFKTHKGVLVFSPVARSWRKVAPMKSARSSSILGVLEINSNSAIFRSQKDRHDHRFTRT 1018
             SF+THKGV  FSP+ +SWRK+A M+ ARS  +LG+ E+ S+ ++  S + R + RF R+
Sbjct: 256  SSFRTHKGVWAFSPLTKSWRKIASMRYARSMPVLGISEVRSDFSVVHSHQHRQERRFPRS 315

Query: 1017 RVGGISDVYEDPHRLSVRRQLEDA--QSEVSIEHTRNPYKFLKSECTLSNPKGVRRFALI 844
            R+ G+SDVYEDPHR S+RRQ  +A  + E S    R  +KF + +   SN K  +RF LI
Sbjct: 316  RIAGVSDVYEDPHRFSLRRQYRNAFDEYEPSSLPNRKSHKFTRQKSGQSNMKDCKRFVLI 375

Query: 843  VVGGLGSWDEPLDSGEIYDPVTNKWIDIGRLPGDFGIVCSGAACKGLFYVCSESDKLAAY 664
             VGGLGSWDEPLDSGEIYDP+ NKW +I RLP DFG+VCSG  C G+FYV SE+DKL  Y
Sbjct: 376  AVGGLGSWDEPLDSGEIYDPIANKWTEIQRLPMDFGVVCSGVICNGMFYVYSETDKLMGY 435

Query: 663  DLERCTWFGIQTSQSPPRLHEYYPKLISCCGRLLMLSVSWCEQDDLSDLRKKAVRKLYEL 484
            D+ER  W  IQ+S  PPR+ EYYPKL+SC G+L MLSVSWCE D     R KAVRKL+EL
Sbjct: 436  DIERGFWMAIQSSPFPPRVQEYYPKLVSCNGQLFMLSVSWCEGDGQIGQRNKAVRKLWEL 495

Query: 483  DLAKLKWKEVSKHPDAPMDWNAVFVEDRGKVYGVEMFKIFGQVLDFLTVCEVTDLRLQWS 304
            DL  L W EVS HPDAPMDWNA FV D+  ++GVEMFKIFGQVLDFLTVC+V+D    WS
Sbjct: 496  DLMYLNWTEVSVHPDAPMDWNAAFVADKNLIFGVEMFKIFGQVLDFLTVCDVSDTGTNWS 555

Query: 303  RISRKHMAHELDASSCVTKS 244
             I+R HM HE DASSC+TKS
Sbjct: 556  HIARNHMTHEFDASSCMTKS 575


>ref|XP_004144244.1| PREDICTED: F-box/kelch-repeat protein At5g42350-like isoform 1
            [Cucumis sativus] gi|449452997|ref|XP_004144245.1|
            PREDICTED: F-box/kelch-repeat protein At5g42350-like
            isoform 2 [Cucumis sativus]
          Length = 580

 Score =  644 bits (1662), Expect = 0.0
 Identities = 304/499 (60%), Positives = 378/499 (75%), Gaps = 4/499 (0%)
 Frame = -1

Query: 1728 GYGSGRRKSNAGEEGKRYQPICGSEDIRVDCFSYGAAERIWKKNSRKDKAAEEPTPNNIM 1549
            G    RR+S+A EEGK Y+ + G E+  VDCFSYG  ER  KK S K     +   N+ +
Sbjct: 76   GDPGSRRRSSASEEGKGYKSLFGVEENGVDCFSYGVKERFRKKQSPKHSGLRDSARNSDV 135

Query: 1548 EFFLPDEILELCLVRLPMTTLMTARLVCKKWRCLTSTGRFVRMRQE--YQTPWLFLFGVI 1375
              FLPD+ILE+CL+RLP+T+LM ARLVCKKWR LTST RF++MR+E  YQTPW+FLFG +
Sbjct: 136  HIFLPDDILEMCLMRLPLTSLMNARLVCKKWRYLTSTRRFLQMRRECLYQTPWIFLFGAV 195

Query: 1374 KDGYCSGHIHALDTSFDQWHKINCDILRGRFQFSVATVGEDVYVVGGCSSLMNFGRVDKR 1195
            K+GYCSG IHALD S  QWHKI+ DIL+GRF FS+A++ +D+YV+GGCSSL NFG+VDK 
Sbjct: 196  KEGYCSGEIHALDVSLKQWHKIDADILKGRFMFSIASIQDDIYVIGGCSSLTNFGKVDKS 255

Query: 1194 SFKTHKGVLVFSPVARSWRKVAPMKSARSSSILGVLEINSNSAIFRSQKDRHDHRFTRTR 1015
            SF+THKGVLVFSP+ +SWRK+A MK ARS  ILG  E+NS+ ++ +S  +R D R+ R+R
Sbjct: 256  SFRTHKGVLVFSPLTKSWRKIASMKYARSMPILGTSEVNSDFSVVQSHHNRQDRRYMRSR 315

Query: 1014 VGGISDVYEDPHRLSVRRQLEDA--QSEVSIEHTRNPYKFLKSECTLSNPKGVRRFALIV 841
             GG  DVYEDPHRLS+RRQ+ +    +++S+   R  YKF++ +   S  KG RRF +I 
Sbjct: 316  AGGSLDVYEDPHRLSLRRQVRNPVEDNDISMLSNRKSYKFIRQKSDQSRAKGHRRFVIIA 375

Query: 840  VGGLGSWDEPLDSGEIYDPVTNKWIDIGRLPGDFGIVCSGAACKGLFYVCSESDKLAAYD 661
            +GGLGSWDEP+DSGEIYD  +NKW +I RLP DFGI+CSG  C G+FYV SE+D+LA YD
Sbjct: 376  IGGLGSWDEPIDSGEIYDSSSNKWTEIQRLPVDFGIICSGVVCNGIFYVYSETDRLAGYD 435

Query: 660  LERCTWFGIQTSQSPPRLHEYYPKLISCCGRLLMLSVSWCEQDDLSDLRKKAVRKLYELD 481
            +ER  W GIQTS  PPR+HEYYPKL+S  GRL MLSVSWCE D     R KAVRKL+ELD
Sbjct: 436  IERGFWIGIQTSPFPPRVHEYYPKLVSSNGRLFMLSVSWCEGDGQIGQRNKAVRKLWELD 495

Query: 480  LAKLKWKEVSKHPDAPMDWNAVFVEDRGKVYGVEMFKIFGQVLDFLTVCEVTDLRLQWSR 301
            L  L W EVS HPDAPMDWNA FV DR  ++G+EMFKIFGQVLDFLTVC++++    W+ 
Sbjct: 496  LVYLAWTEVSVHPDAPMDWNAAFVADRNLIFGIEMFKIFGQVLDFLTVCDISNAVSDWNH 555

Query: 300  ISRKHMAHELDASSCVTKS 244
            ISR  + HE+DASSC+TKS
Sbjct: 556  ISRTRVTHEMDASSCLTKS 574


>ref|XP_004158287.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein
            At5g42350-like [Cucumis sativus]
          Length = 579

 Score =  637 bits (1642), Expect = e-180
 Identities = 301/499 (60%), Positives = 378/499 (75%), Gaps = 4/499 (0%)
 Frame = -1

Query: 1728 GYGSGRRKSNAGEEGKRYQPICGSEDIRVDCFSYGAAERIWKKNSRKDKAAEEPTPNNIM 1549
            G    RR+S+A EEGK Y+ + G E+  VDCFSYG  ER ++KN  +     +   N+ +
Sbjct: 76   GDPGSRRRSSASEEGKGYKSLFGVEENGVDCFSYGVKER-FRKNKAQSILLRDSARNSDV 134

Query: 1548 EFFLPDEILELCLVRLPMTTLMTARLVCKKWRCLTSTGRFVRMRQE--YQTPWLFLFGVI 1375
              FLPD+ILE+CL+RLP+T+LM ARLVCKKWR LTST RF++MR+E  YQTPW+F FG +
Sbjct: 135  HIFLPDDILEMCLMRLPLTSLMNARLVCKKWRYLTSTRRFLQMRRECLYQTPWIFXFGAV 194

Query: 1374 KDGYCSGHIHALDTSFDQWHKINCDILRGRFQFSVATVGEDVYVVGGCSSLMNFGRVDKR 1195
            K+GYCSG IHALD S  QWHKI+ DIL+GRF FS+A++ +D+YV+GGCSSL NFG+VDK 
Sbjct: 195  KEGYCSGEIHALDVSLKQWHKIDADILKGRFMFSIASIQDDIYVIGGCSSLTNFGKVDKS 254

Query: 1194 SFKTHKGVLVFSPVARSWRKVAPMKSARSSSILGVLEINSNSAIFRSQKDRHDHRFTRTR 1015
            SF+THKGVLVFSP+ +SWRK+A MK ARS  ILG  E+NS+ ++ +S  +R D R+ R+R
Sbjct: 255  SFRTHKGVLVFSPLTKSWRKIASMKYARSMPILGTSEVNSDFSVVQSHHNRQDRRYMRSR 314

Query: 1014 VGGISDVYEDPHRLSVRRQLEDA--QSEVSIEHTRNPYKFLKSECTLSNPKGVRRFALIV 841
             GG  DVYEDPHRLS+RRQ+ +    +++S+   R  YKF++ +   S  KG RRF +I 
Sbjct: 315  AGGSLDVYEDPHRLSLRRQVRNPVEDNDISMLSNRKSYKFIRQKSDQSRAKGHRRFVIIA 374

Query: 840  VGGLGSWDEPLDSGEIYDPVTNKWIDIGRLPGDFGIVCSGAACKGLFYVCSESDKLAAYD 661
            +GGLGSWDEP+DSGEIYD  +NKW +I RLP DFGI+CSG  C G+FYV SE+D+LA YD
Sbjct: 375  IGGLGSWDEPIDSGEIYDSSSNKWTEIQRLPVDFGIICSGVVCNGIFYVYSETDRLAGYD 434

Query: 660  LERCTWFGIQTSQSPPRLHEYYPKLISCCGRLLMLSVSWCEQDDLSDLRKKAVRKLYELD 481
            +ER  W GIQTS  PPR+HEYYPKL+S  GRL MLSVSWCE D     R KAVRKL+ELD
Sbjct: 435  IERGFWIGIQTSPFPPRVHEYYPKLVSSNGRLFMLSVSWCEGDGQIGQRNKAVRKLWELD 494

Query: 480  LAKLKWKEVSKHPDAPMDWNAVFVEDRGKVYGVEMFKIFGQVLDFLTVCEVTDLRLQWSR 301
            L  L W EVS HPDAPMDWNA FV DR  ++G+EMFKIFGQVLDFLTVC++++    W+ 
Sbjct: 495  LVYLAWTEVSVHPDAPMDWNAAFVADRNLIFGIEMFKIFGQVLDFLTVCDISNAVSDWNH 554

Query: 300  ISRKHMAHELDASSCVTKS 244
            ISR  + HE+DASSC+TKS
Sbjct: 555  ISRTRVTHEMDASSCLTKS 573


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