BLASTX nr result

ID: Coptis23_contig00014840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014840
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299295.1| predicted protein [Populus trichocarpa] gi|2...   218   7e-55
ref|XP_002518171.1| chaperonin-60kD, ch60, putative [Ricinus com...   217   1e-54
ref|XP_003535968.1| PREDICTED: chaperonin CPN60-2, mitochondrial...   216   3e-54
ref|XP_003535967.1| PREDICTED: chaperonin CPN60-2, mitochondrial...   216   3e-54
ref|XP_003591643.1| Chaperonin CPN60-like protein [Medicago trun...   216   3e-54

>ref|XP_002299295.1| predicted protein [Populus trichocarpa] gi|222846553|gb|EEE84100.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  218 bits (556), Expect = 7e-55
 Identities = 112/127 (88%), Positives = 123/127 (96%)
 Frame = +1

Query: 304 ANLASKARIASRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGP 483
           ++LASKARIA RS+TN +GSRLSWSRNYAAKDIRFGV+ARA ML+GVEELADAVKVTMGP
Sbjct: 6   SSLASKARIA-RSSTNQIGSRLSWSRNYAAKDIRFGVEARAGMLKGVEELADAVKVTMGP 64

Query: 484 KGRNVIIEQSYGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCAT 663
           KGRNV+IEQSYG+PKVTKDGVTVAKSIEFKDK+KNVGASLVKQVANATN+ AGDGTTCAT
Sbjct: 65  KGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDAAGDGTTCAT 124

Query: 664 VLTRAIF 684
           VLT+AIF
Sbjct: 125 VLTQAIF 131


>ref|XP_002518171.1| chaperonin-60kD, ch60, putative [Ricinus communis]
           gi|223542767|gb|EEF44304.1| chaperonin-60kD, ch60,
           putative [Ricinus communis]
          Length = 574

 Score =  217 bits (553), Expect = 1e-54
 Identities = 110/127 (86%), Positives = 125/127 (98%)
 Frame = +1

Query: 304 ANLASKARIASRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGP 483
           ++LASKARIA R++T+ +GSRLSWSRNYAAKDI+FGV+ARALML+GVEELA+AVKVTMGP
Sbjct: 6   SSLASKARIA-RNSTHQIGSRLSWSRNYAAKDIKFGVEARALMLKGVEELAEAVKVTMGP 64

Query: 484 KGRNVIIEQSYGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCAT 663
           KGRNV+IEQS+G+PKVTKDGVTVAKSIEFKDKIKN+GASLVKQVANATN+VAGDGTTCAT
Sbjct: 65  KGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKIKNIGASLVKQVANATNDVAGDGTTCAT 124

Query: 664 VLTRAIF 684
           VLTRAIF
Sbjct: 125 VLTRAIF 131


>ref|XP_003535968.1| PREDICTED: chaperonin CPN60-2, mitochondrial-like isoform 2
           [Glycine max]
          Length = 571

 Score =  216 bits (550), Expect = 3e-54
 Identities = 112/127 (88%), Positives = 124/127 (97%)
 Frame = +1

Query: 304 ANLASKARIASRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGP 483
           +NLASKARIA RS+++ +GSRLS SRNYAAKDIRFGV+ARALML+GVEELADAVKVTMGP
Sbjct: 6   SNLASKARIA-RSSSHQIGSRLSSSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGP 64

Query: 484 KGRNVIIEQSYGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCAT 663
           KGRNV+IEQS+G+PKVTKDGVTVAKSIEFKDK+KNVGASLVKQVANATN+VAGDGTTCAT
Sbjct: 65  KGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGTTCAT 124

Query: 664 VLTRAIF 684
           VLTRAIF
Sbjct: 125 VLTRAIF 131


>ref|XP_003535967.1| PREDICTED: chaperonin CPN60-2, mitochondrial-like isoform 1
           [Glycine max]
          Length = 575

 Score =  216 bits (550), Expect = 3e-54
 Identities = 112/127 (88%), Positives = 124/127 (97%)
 Frame = +1

Query: 304 ANLASKARIASRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGP 483
           +NLASKARIA RS+++ +GSRLS SRNYAAKDIRFGV+ARALML+GVEELADAVKVTMGP
Sbjct: 6   SNLASKARIA-RSSSHQIGSRLSSSRNYAAKDIRFGVEARALMLKGVEELADAVKVTMGP 64

Query: 484 KGRNVIIEQSYGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCAT 663
           KGRNV+IEQS+G+PKVTKDGVTVAKSIEFKDK+KNVGASLVKQVANATN+VAGDGTTCAT
Sbjct: 65  KGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGTTCAT 124

Query: 664 VLTRAIF 684
           VLTRAIF
Sbjct: 125 VLTRAIF 131


>ref|XP_003591643.1| Chaperonin CPN60-like protein [Medicago truncatula]
           gi|92882357|gb|ABE86688.1| GroEL-like chaperone, ATPase
           [Medicago truncatula] gi|355480691|gb|AES61894.1|
           Chaperonin CPN60-like protein [Medicago truncatula]
          Length = 574

 Score =  216 bits (550), Expect = 3e-54
 Identities = 108/127 (85%), Positives = 124/127 (97%)
 Frame = +1

Query: 304 ANLASKARIASRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGP 483
           ++LASKARIA RSN N +GSR++WSRNYAAK+I+FGV+ARALML+GVEELA+AVKVTMGP
Sbjct: 6   SSLASKARIA-RSNANQIGSRVAWSRNYAAKEIKFGVEARALMLKGVEELAEAVKVTMGP 64

Query: 484 KGRNVIIEQSYGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCAT 663
           KGRNV+IEQS+G+PKVTKDGVTVAKSIEFKDK+KN+GASLVKQVANATN+VAGDGTTCAT
Sbjct: 65  KGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCAT 124

Query: 664 VLTRAIF 684
           VLTRAIF
Sbjct: 125 VLTRAIF 131


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