BLASTX nr result

ID: Coptis23_contig00014827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014827
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17901.3| unnamed protein product [Vitis vinifera]              241   2e-61
emb|CBI17900.3| unnamed protein product [Vitis vinifera]              240   3e-61
ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27...   240   3e-61
emb|CAN77367.1| hypothetical protein VITISV_010740 [Vitis vinifera]   240   3e-61
ref|XP_002332820.1| cc-nbs-lrr resistance protein [Populus trich...   236   5e-60

>emb|CBI17901.3| unnamed protein product [Vitis vinifera]
          Length = 1063

 Score =  241 bits (614), Expect = 2e-61
 Identities = 128/302 (42%), Positives = 192/302 (63%), Gaps = 6/302 (1%)
 Frame = +2

Query: 2    VGIFGMPGVGKTMLMEEIAKQVKKDNLFQEVVTVSVSENPNLEKIQRGIAKRLDLKLDDQ 181
            +G++GM GVGKT +++++     +D LFQ V    +S+NP+L KIQ  IA  L+LKL+++
Sbjct: 177  IGVYGMGGVGKTTMVKQVGANAHRDGLFQHVAMAVISQNPDLRKIQAQIADMLNLKLEEE 236

Query: 182  DETLFSEQLFRRLNMDNKTLIVLDDIWRRLDLTKVGIP-CGNNKRSC--KVVFTTRQQGT 352
             E   + +L  R+      LI+LDDIWRR+DL+++GIP  G++  +C  K++ TTR +  
Sbjct: 237  SEAGRAARLRERIMRGKSVLIILDDIWRRIDLSEIGIPSTGSDLDACKSKILLTTRLENV 296

Query: 353  CDEMAADIKIEVAVLSELDSWSLFQQKAGDVVNSSTHQTDAREIVRECKGLPLAIVTLGR 532
            C  M +  K+ + +LSE DSW+LF +KAG VV+S      A++IV+EC GLP+A+V + R
Sbjct: 297  CHVMESQAKVPLNILSEQDSWTLFGRKAGRVVDSPDFHNVAQKIVKECGGLPIALVVVAR 356

Query: 533  ALANKDAIVFADTLKQLQ--KSIYFDHMDPVTASIRLSYDFLQNGSTKLSFLLCCLFPED 706
            AL +KD   + +  +QL+  K    D    V   I+LSYD+L+  STK  FL+CCLFPED
Sbjct: 357  ALGDKDLDEWKEAARQLEMSKPTNLDDDGGVFKCIKLSYDYLKGNSTKPCFLICCLFPED 416

Query: 707  FKIKINALFCYVMGERILKDVDNLEEARNRLHSTIEKL-ISSCLLIKNEDGDIMMHDVVR 883
              I I  L  Y +G+ + ++ + +EEAR R  S ++ L   S LL   E+G + MHDVVR
Sbjct: 417  TDISIEDLVKYGLGQGLFQEANTIEEARGRARSVVKYLKACSLLLDSTEEGGVKMHDVVR 476

Query: 884  DV 889
            D+
Sbjct: 477  DM 478


>emb|CBI17900.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  240 bits (613), Expect = 3e-61
 Identities = 127/302 (42%), Positives = 192/302 (63%), Gaps = 6/302 (1%)
 Frame = +2

Query: 2    VGIFGMPGVGKTMLMEEIAKQVKKDNLFQEVVTVSVSENPNLEKIQRGIAKRLDLKLDDQ 181
            +G++GM GVGKT +++++     +D LFQ V    +S+NP+L KIQ  IA  L+LKL+++
Sbjct: 177  IGVYGMGGVGKTTMVKQVGANAHRDGLFQHVAMAVISQNPDLRKIQAQIADMLNLKLEEE 236

Query: 182  DETLFSEQLFRRLNMDNKTLIVLDDIWRRLDLTKVGIP-CGNNKRSC--KVVFTTRQQGT 352
             E   + +L  R+      LI+LDDIWRR+DL+++GIP  G++  +C  K++ TTR +  
Sbjct: 237  SEAGRAARLRERIMRGKSVLIILDDIWRRIDLSEIGIPSTGSDLDACKSKILLTTRLENV 296

Query: 353  CDEMAADIKIEVAVLSELDSWSLFQQKAGDVVNSSTHQTDAREIVRECKGLPLAIVTLGR 532
            C  M +  K+ + +LSE DSW+LF +KAG +V+S      A++IV+EC GLP+A+V + R
Sbjct: 297  CHVMESQAKVPLNILSEQDSWTLFGRKAGRIVDSPDFHNVAQKIVKECGGLPIALVVVAR 356

Query: 533  ALANKDAIVFADTLKQLQ--KSIYFDHMDPVTASIRLSYDFLQNGSTKLSFLLCCLFPED 706
            AL +KD   + +  +QL+  K    D    V   I+LSYD+L+  STK  FL+CCLFPED
Sbjct: 357  ALGDKDLDEWKEAARQLEMSKPTNLDDDGGVFKCIKLSYDYLKGNSTKPCFLICCLFPED 416

Query: 707  FKIKINALFCYVMGERILKDVDNLEEARNRLHSTIEKL-ISSCLLIKNEDGDIMMHDVVR 883
              I I  L  Y +G+ + ++ + +EEAR R  S ++ L   S LL   E+G + MHDVVR
Sbjct: 417  TDISIEDLVKYGLGQGLFQEANTIEEARGRARSVVKYLKACSLLLDSTEEGGVKMHDVVR 476

Query: 884  DV 889
            D+
Sbjct: 477  DM 478


>ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1063

 Score =  240 bits (613), Expect = 3e-61
 Identities = 127/302 (42%), Positives = 192/302 (63%), Gaps = 6/302 (1%)
 Frame = +2

Query: 2    VGIFGMPGVGKTMLMEEIAKQVKKDNLFQEVVTVSVSENPNLEKIQRGIAKRLDLKLDDQ 181
            +G++GM GVGKT +++++     +D LFQ V    +S+NP+L KIQ  IA  L+LKL+++
Sbjct: 177  IGVYGMGGVGKTTMVKQVGANAHRDGLFQHVAMAVISQNPDLRKIQAQIADMLNLKLEEE 236

Query: 182  DETLFSEQLFRRLNMDNKTLIVLDDIWRRLDLTKVGIP-CGNNKRSC--KVVFTTRQQGT 352
             E   + +L  R+      LI+LDDIWRR+DL+++GIP  G++  +C  K++ TTR +  
Sbjct: 237  SEAGRAARLRERIMRGKSVLIILDDIWRRIDLSEIGIPSTGSDLDACKSKILLTTRLENV 296

Query: 353  CDEMAADIKIEVAVLSELDSWSLFQQKAGDVVNSSTHQTDAREIVRECKGLPLAIVTLGR 532
            C  M +  K+ + +LSE DSW+LF +KAG +V+S      A++IV+EC GLP+A+V + R
Sbjct: 297  CHVMESQAKVPLNILSEQDSWTLFGRKAGRIVDSPDFHNVAQKIVKECGGLPIALVVVAR 356

Query: 533  ALANKDAIVFADTLKQLQ--KSIYFDHMDPVTASIRLSYDFLQNGSTKLSFLLCCLFPED 706
            AL +KD   + +  +QL+  K    D    V   I+LSYD+L+  STK  FL+CCLFPED
Sbjct: 357  ALGDKDLDEWKEAARQLEMSKPTNLDDDGGVFKCIKLSYDYLKGNSTKPCFLICCLFPED 416

Query: 707  FKIKINALFCYVMGERILKDVDNLEEARNRLHSTIEKL-ISSCLLIKNEDGDIMMHDVVR 883
              I I  L  Y +G+ + ++ + +EEAR R  S ++ L   S LL   E+G + MHDVVR
Sbjct: 417  TDISIEDLVKYGLGQGLFQEANTIEEARGRARSVVKYLKACSLLLDSTEEGGVKMHDVVR 476

Query: 884  DV 889
            D+
Sbjct: 477  DM 478


>emb|CAN77367.1| hypothetical protein VITISV_010740 [Vitis vinifera]
          Length = 975

 Score =  240 bits (613), Expect = 3e-61
 Identities = 127/302 (42%), Positives = 192/302 (63%), Gaps = 6/302 (1%)
 Frame = +2

Query: 2   VGIFGMPGVGKTMLMEEIAKQVKKDNLFQEVVTVSVSENPNLEKIQRGIAKRLDLKLDDQ 181
           +G++GM GVGKT +++++     +D LFQ V    +S+NP+L KIQ  IA  L+LKL+++
Sbjct: 86  IGVYGMGGVGKTTMVKQVGANAHRDGLFQHVAMAVISQNPDLRKIQAQIADMLNLKLEEE 145

Query: 182 DETLFSEQLFRRLNMDNKTLIVLDDIWRRLDLTKVGIP-CGNNKRSC--KVVFTTRQQGT 352
            E   + +L  R+      LI+LDDIWRR+DL+++GIP  G++  +C  K++ TTR +  
Sbjct: 146 SEAGRAARLRERIMRGKSVLIILDDIWRRIDLSEIGIPSTGSDLDACKSKILLTTRLENV 205

Query: 353 CDEMAADIKIEVAVLSELDSWSLFQQKAGDVVNSSTHQTDAREIVRECKGLPLAIVTLGR 532
           C  M +  K+ + +LSE DSW+LF +KAG +V+S      A++IV+EC GLP+A+V + R
Sbjct: 206 CHVMESQAKVPLNILSEQDSWTLFGRKAGRIVDSPDFHNVAQKIVKECGGLPIALVVVAR 265

Query: 533 ALANKDAIVFADTLKQLQ--KSIYFDHMDPVTASIRLSYDFLQNGSTKLSFLLCCLFPED 706
           AL +KD   + +  +QL+  K    D    V   I+LSYD+L+  STK  FL+CCLFPED
Sbjct: 266 ALGDKDLDEWKEAARQLEMSKPTNLDDDGGVFKCIKLSYDYLKGNSTKPCFLICCLFPED 325

Query: 707 FKIKINALFCYVMGERILKDVDNLEEARNRLHSTIEKL-ISSCLLIKNEDGDIMMHDVVR 883
             I I  L  Y +G+ + ++ + +EEAR R  S ++ L   S LL   E+G + MHDVVR
Sbjct: 326 TDISIEDLVKYGLGQGLFQEANTIEEARGRARSVVKYLKACSLLLDSTEEGGVKMHDVVR 385

Query: 884 DV 889
           D+
Sbjct: 386 DM 387


>ref|XP_002332820.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834208|gb|EEE72685.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 655

 Score =  236 bits (602), Expect = 5e-60
 Identities = 122/302 (40%), Positives = 193/302 (63%), Gaps = 6/302 (1%)
 Frame = +2

Query: 2    VGIFGMPGVGKTMLMEEIAKQVKKDNLFQEVVTVSVSENPNLEKIQRGIAKRLDLKLDDQ 181
            +G+ GM GVGKT L+ ++    ++  LF EV+  +VS+NPN+  +Q  +A +L L +   
Sbjct: 175  IGLCGMGGVGKTTLVRKVGTIARESQLFDEVLMATVSQNPNVTDLQNQMADKLGLDIRGS 234

Query: 182  DETLFSEQLFRRLNMDNKTLIVLDDIWRRLDLTKVGIPCGNNKRSCKVVFTTRQQGTCDE 361
             +   +++L++RL    + LI+LDD+W+ +D  ++GIP G++ R CK++ TTR QG C  
Sbjct: 235  SKDGRADRLWQRLKKVERMLIILDDVWKVIDFQEIGIPFGDDHRGCKILLTTRLQGICSY 294

Query: 362  MAADIKIEVAVLSELDSWSLFQQKAGDVVNSSTHQTDAREIVRECKGLPLAIVTLGRALA 541
                 K+ ++ L E ++W LF+  AG  V  ST  T ARE+ REC+GLP+A+VT+G AL 
Sbjct: 295  TECRKKVLLSPLPEKEAWDLFRINAGLRVGESTLNTVAREVARECQGLPIALVTVGMALR 354

Query: 542  NKDAIVFADTLKQLQKSIY--FDHMD---PVTASIRLSYDFLQNGSTKLSFLLCCLFPED 706
            +K A+ +   + QL+ S +   +H+D      A ++LSYD+L++  TKL FLLCCLFPED
Sbjct: 355  DKSAVEWEVAIGQLKNSHFPDMEHIDEQRTAYACLKLSYDYLKSKETKLCFLLCCLFPED 414

Query: 707  FKIKINALFCYVMGERILKDVDNLEEARNRLHSTIEKLISSCLLIKNE-DGDIMMHDVVR 883
            + I I  L  Y +G  + +DV+++ +AR R++  I+KL   C+L+  E D  + MHD+VR
Sbjct: 415  YHIPIEDLTRYAVGYELHQDVESIGDARKRVYVEIKKLKDCCMLLDTETDEHVKMHDLVR 474

Query: 884  DV 889
            DV
Sbjct: 475  DV 476


Top