BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014804
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309467.1| f-box family protein [Populus trichocarpa] g...   221   5e-55
ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like ...   219   2e-54
emb|CBI20722.3| unnamed protein product [Vitis vinifera]              219   2e-54
ref|XP_002516134.1| conserved hypothetical protein [Ricinus comm...   214   4e-53
ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|2...   212   2e-52

>ref|XP_002309467.1| f-box family protein [Populus trichocarpa]
            gi|222855443|gb|EEE92990.1| f-box family protein [Populus
            trichocarpa]
          Length = 895

 Score =  221 bits (562), Expect = 5e-55
 Identities = 142/302 (47%), Positives = 172/302 (56%), Gaps = 23/302 (7%)
 Frame = +2

Query: 704  GEGSSGTAVEGESSTGME---------LGMGSSSNFDEF-GSGSNEGIIINVDFLDDVIP 853
            G GSSGT   GE   G E         L +  S+    + G G N G           + 
Sbjct: 10   GGGSSGTTDWGEVGQGFEEEGQFVAPPLALRRSAFCTSWLGRGENSGS-------SSAVA 62

Query: 854  VQMTKGS----RDSQHKRAKVHSDYMEHHYENVLSLGLDSSTSHADVGHNISLDSVSHDE 1021
                 G+    RDS +KRAKV+S   + HY  V++    +STS AD    +S  S     
Sbjct: 63   EAAGSGNGGCDRDSHNKRAKVYSYSNDCHYAAVMASDAGNSTSSADRHLGLSQSSSIPSN 122

Query: 1022 VMVLYLN--------PNPIEG-GSEDHMDPSDDTSKMEEFEIRMDLTDDLLHMVLSFLGQ 1174
              + Y N         NP +  G+ D  D S  TSK E+ E+RMDLTDDLLHMV SFL  
Sbjct: 123  NEIFYHNFMWNNNSDDNPFDSNGARDDGDDSG-TSKSEDLEVRMDLTDDLLHMVFSFLDP 181

Query: 1175 VDLSRAASVCRQWRVASAHEDFWRCLNFKDRSISSTQFTDMCHRYPNATEVNVCGAPGIH 1354
            ++L RAA VCRQWR ASAHEDFWRCLNF++R+IS  QF DM  RYPNATEVN+ GAP IH
Sbjct: 182  INLCRAAMVCRQWRAASAHEDFWRCLNFENRNISVEQFEDMSRRYPNATEVNIYGAPAIH 241

Query: 1355 WLGINAIELLRNLETLILGNGQREEKEQLGEGFFNVLGDCAALKSLSVIDATLGNGSQEI 1534
             L + A+  LRNLETL +G G      QLG+ FF  LGDC  LKSL+V DATLG+G QEI
Sbjct: 242  LLVMKALFSLRNLETLTVGKG------QLGDPFFGALGDCIMLKSLNVNDATLGSGIQEI 295

Query: 1535 TV 1540
             +
Sbjct: 296  PI 297


>ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like [Vitis vinifera]
          Length = 922

 Score =  219 bits (558), Expect = 2e-54
 Identities = 135/303 (44%), Positives = 169/303 (55%), Gaps = 23/303 (7%)
 Frame = +2

Query: 704  GEGSSGTAVEGESSTGMELGMGSSSNFDEFGSGSNEGIIINVDFL-------------DD 844
            G G  G    G+     +LG+G    FD+F S S +GI  N +               DD
Sbjct: 38   GSGGGGGGGGGDQ---WQLGVGGWRQFDQFASTSGQGIGDNSEAFFPEKCDRPEGSERDD 94

Query: 845  VIPVQMTKGSRDSQHKRAKVHSDYMEHHYE-NVLSLGLDSSTSHADVGHNISLDSVSHDE 1021
                   + S D  HKRAKVHS      Y    + L   +S+S  D  +N+S   +  + 
Sbjct: 95   CDSDD--RDSWDVHHKRAKVHSYSQGCTYAITAMPLEAGNSSSSTDRDYNVSQSPIPFNN 152

Query: 1022 VMVLYLNPNPIEGGSEDHMDPSD---------DTSKMEEFEIRMDLTDDLLHMVLSFLGQ 1174
              +L L     +   E+ +D +D          TSKME+ E+RMDLTDDLLHMV SFL  
Sbjct: 153  E-ILRLTSMSNDSDDENPLDSNDGRDEEGDGFSTSKMEDLEVRMDLTDDLLHMVFSFLDH 211

Query: 1175 VDLSRAASVCRQWRVASAHEDFWRCLNFKDRSISSTQFTDMCHRYPNATEVNVCGAPGIH 1354
            ++L RAA VC+QWR  S+HEDFWRCLNF++R+IS  QF DMC RYPNATEVN+ GAP IH
Sbjct: 212  INLCRAAIVCKQWRAGSSHEDFWRCLNFENRNISEEQFEDMCRRYPNATEVNIFGAPSIH 271

Query: 1355 WLGINAIELLRNLETLILGNGQREEKEQLGEGFFNVLGDCAALKSLSVIDATLGNGSQEI 1534
             L + A+  LRNLETL LG G       LG+ FF  L DC  LK L V DATLGNG QEI
Sbjct: 272  SLVMTAMSSLRNLETLTLGKG------TLGDTFFQALADCYMLKRLLVNDATLGNGIQEI 325

Query: 1535 TVF 1543
             ++
Sbjct: 326  PIY 328


>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score =  219 bits (558), Expect = 2e-54
 Identities = 135/303 (44%), Positives = 169/303 (55%), Gaps = 23/303 (7%)
 Frame = +2

Query: 704  GEGSSGTAVEGESSTGMELGMGSSSNFDEFGSGSNEGIIINVDFL-------------DD 844
            G G  G    G+     +LG+G    FD+F S S +GI  N +               DD
Sbjct: 4    GSGGGGGGGGGDQ---WQLGVGGWRQFDQFASTSGQGIGDNSEAFFPEKCDRPEGSERDD 60

Query: 845  VIPVQMTKGSRDSQHKRAKVHSDYMEHHYE-NVLSLGLDSSTSHADVGHNISLDSVSHDE 1021
                   + S D  HKRAKVHS      Y    + L   +S+S  D  +N+S   +  + 
Sbjct: 61   CDSDD--RDSWDVHHKRAKVHSYSQGCTYAITAMPLEAGNSSSSTDRDYNVSQSPIPFNN 118

Query: 1022 VMVLYLNPNPIEGGSEDHMDPSD---------DTSKMEEFEIRMDLTDDLLHMVLSFLGQ 1174
              +L L     +   E+ +D +D          TSKME+ E+RMDLTDDLLHMV SFL  
Sbjct: 119  E-ILRLTSMSNDSDDENPLDSNDGRDEEGDGFSTSKMEDLEVRMDLTDDLLHMVFSFLDH 177

Query: 1175 VDLSRAASVCRQWRVASAHEDFWRCLNFKDRSISSTQFTDMCHRYPNATEVNVCGAPGIH 1354
            ++L RAA VC+QWR  S+HEDFWRCLNF++R+IS  QF DMC RYPNATEVN+ GAP IH
Sbjct: 178  INLCRAAIVCKQWRAGSSHEDFWRCLNFENRNISEEQFEDMCRRYPNATEVNIFGAPSIH 237

Query: 1355 WLGINAIELLRNLETLILGNGQREEKEQLGEGFFNVLGDCAALKSLSVIDATLGNGSQEI 1534
             L + A+  LRNLETL LG G       LG+ FF  L DC  LK L V DATLGNG QEI
Sbjct: 238  SLVMTAMSSLRNLETLTLGKG------TLGDTFFQALADCYMLKRLLVNDATLGNGIQEI 291

Query: 1535 TVF 1543
             ++
Sbjct: 292  PIY 294


>ref|XP_002516134.1| conserved hypothetical protein [Ricinus communis]
            gi|223544620|gb|EEF46136.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 997

 Score =  214 bits (546), Expect = 4e-53
 Identities = 121/231 (52%), Positives = 145/231 (62%), Gaps = 9/231 (3%)
 Frame = +2

Query: 875  RDSQHKRAKVHSDYMEHHYENVLSLGLDSSTSHADVGHNISLDSVSHDEVMVLYLN---- 1042
            RD  +KRAKV+S     HY   +S    + +S +D   N++  S       + Y N    
Sbjct: 107  RDMHNKRAKVYSASRACHYMTAMSSDAGNPSSSSDRDFNLNQSSSVPARNEIFYHNFMWN 166

Query: 1043 ----PNPIE-GGSEDHMDPSDDTSKMEEFEIRMDLTDDLLHMVLSFLGQVDLSRAASVCR 1207
                 NP + GG  D  D S  TSK E+ E+RMDLTDDLLHMV SFL  ++L RAA VCR
Sbjct: 167  NSSEENPCDSGGGRDDGDESG-TSKSEDLEVRMDLTDDLLHMVFSFLDHLNLCRAAMVCR 225

Query: 1208 QWRVASAHEDFWRCLNFKDRSISSTQFTDMCHRYPNATEVNVCGAPGIHWLGINAIELLR 1387
            QWR ASAHEDFWRCLNF++R+IS  QF DMC RYPNATEVN+  AP IH L + A+  LR
Sbjct: 226  QWRAASAHEDFWRCLNFENRNISIEQFDDMCRRYPNATEVNIYSAPNIHLLVMKALSSLR 285

Query: 1388 NLETLILGNGQREEKEQLGEGFFNVLGDCAALKSLSVIDATLGNGSQEITV 1540
            NLE L LG G      QLG+ FF+ L DC+ LKSL V DATLGNG  EI +
Sbjct: 286  NLEVLTLGRG------QLGDPFFHALADCSMLKSLYVNDATLGNGVHEIPI 330


>ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|222865630|gb|EEF02761.1|
            predicted protein [Populus trichocarpa]
          Length = 957

 Score =  212 bits (539), Expect = 2e-52
 Identities = 133/299 (44%), Positives = 170/299 (56%), Gaps = 20/299 (6%)
 Frame = +2

Query: 704  GEGSSGTAVEGESSTGME---------LGMGSSS-NFDEFGSGSNEGIIINVDFLDDVIP 853
            G G SG A  GE   G E         L + SS+        G + G   +   + +   
Sbjct: 6    GGGGSGAATWGEVGPGFEVEAQFVAPSLALRSSAFRASWLARGESSG---SSSAVAEAEG 62

Query: 854  VQMTKGSRDSQHKRAKVHSDYMEHHYENVLSLGLDSSTSHADVGHNISLDSVSHDEVMVL 1033
                K  RD+ +KRAKV+S   + HY  V+S  +  STS AD    ++  S       + 
Sbjct: 63   SGKEKCDRDAHNKRAKVYSCSNDSHYAAVMSSDVGDSTSSADRDLGLTQSSSISSNNEIC 122

Query: 1034 YLN--------PNPIEGGSEDHMDPSDDT--SKMEEFEIRMDLTDDLLHMVLSFLGQVDL 1183
            Y N         NP +  S    D  DD+  S  E+ ++RMDLTDDLLHMV SFL  ++L
Sbjct: 123  YHNFMWNNNSDENPFD--SSGGRDGGDDSVISNSEDLDVRMDLTDDLLHMVFSFLDHINL 180

Query: 1184 SRAASVCRQWRVASAHEDFWRCLNFKDRSISSTQFTDMCHRYPNATEVNVCGAPGIHWLG 1363
             RAA VCRQW+ ASAHEDFWRCL+F++R+IS  QF DM  RYPNATEVN+ GAP I  L 
Sbjct: 181  CRAAMVCRQWQAASAHEDFWRCLDFENRNISVEQFEDMSRRYPNATEVNIYGAPSIQLLV 240

Query: 1364 INAIELLRNLETLILGNGQREEKEQLGEGFFNVLGDCAALKSLSVIDATLGNGSQEITV 1540
            + A+  LRNLE+L LG G      QLG+ FF+ LGDC+ LK+L+V DATLGNG QEI +
Sbjct: 241  MKAVSSLRNLESLTLGKG------QLGDPFFHALGDCSMLKNLNVNDATLGNGIQEIPI 293