BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014794
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264217.2| PREDICTED: ATP-dependent Clp protease ATP-bi...   111   7e-23
ref|XP_003533258.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   111   7e-23
emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]   111   7e-23
ref|XP_003549149.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   110   9e-23
ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subun...   105   3e-21

>ref|XP_002264217.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
           [Vitis vinifera]
          Length = 685

 Score =  111 bits (277), Expect = 7e-23
 Identities = 71/158 (44%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
 Frame = +3

Query: 15  MSGGVIR-LRKIKQSLIIIAHSRFXXXXXXXXXXXXXXLGSPSSPINHRFN---YMG--R 176
           M+GGV+R  R++ + L+++                        SPI+ RF    +MG  R
Sbjct: 1   MAGGVLRGKREVVERLLMVGRCNHRFMQ--------------KSPISTRFANCLHMGSHR 46

Query: 177 RIGGGLQQQERYKWDGGSSDESSSTRKIRAEANCPRCSKQMDLLFSNR------------ 320
           R    +  QERYKWD G SD    TRKIRAEANCPRCSK MDLLFSNR            
Sbjct: 47  RRESLIGVQERYKWDHGGSD-GFQTRKIRAEANCPRCSKVMDLLFSNRHFPSNFSPAVPT 105

Query: 321 ----GDRDKGYYQAINLCPTCKTAYYFRPHKLLPLQGT 422
                    G YQA+NLCP CKTAYYFRP+K+ PLQG+
Sbjct: 106 DSSNSKGSGGSYQAVNLCPNCKTAYYFRPYKIAPLQGS 143


>ref|XP_003533258.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
           [Glycine max]
          Length = 713

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/87 (63%), Positives = 66/87 (75%), Gaps = 13/87 (14%)
 Frame = +3

Query: 201 QERYKWDGGSSDESSSTRKIRAEANCPRCSKQMDLLFSNR-------------GDRDKGY 341
           QERYKWD G SD++SS RKIRAEANCPRC+K M+L+FSNR             G+R+KGY
Sbjct: 55  QERYKWDRGGSDDTSS-RKIRAEANCPRCTKDMNLVFSNRHFPTPQIESELGGGEREKGY 113

Query: 342 YQAINLCPTCKTAYYFRPHKLLPLQGT 422
            Q++NLCP+CKTAYYFRP+   PLQGT
Sbjct: 114 -QSVNLCPSCKTAYYFRPYDTTPLQGT 139


>emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]
          Length = 730

 Score =  111 bits (277), Expect = 7e-23
 Identities = 71/158 (44%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
 Frame = +3

Query: 15  MSGGVIR-LRKIKQSLIIIAHSRFXXXXXXXXXXXXXXLGSPSSPINHRFN---YMG--R 176
           M+GGV+R  R++ + L+++                        SPI+ RF    +MG  R
Sbjct: 1   MAGGVLRGKREVVERLLMVGRCNHRFMQ--------------KSPISTRFANCLHMGSHR 46

Query: 177 RIGGGLQQQERYKWDGGSSDESSSTRKIRAEANCPRCSKQMDLLFSNR------------ 320
           R    +  QERYKWD G SD    TRKIRAEANCPRCSK MDLLFSNR            
Sbjct: 47  RRESLIGVQERYKWDHGGSD-GFQTRKIRAEANCPRCSKVMDLLFSNRHFPSNFSPAVPT 105

Query: 321 ----GDRDKGYYQAINLCPTCKTAYYFRPHKLLPLQGT 422
                    G YQA+NLCP CKTAYYFRP+K+ PLQG+
Sbjct: 106 DSSNSKGSGGSYQAVNLCPNCKTAYYFRPYKIAPLQGS 143


>ref|XP_003549149.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
           [Glycine max]
          Length = 711

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 17/110 (15%)
 Frame = +3

Query: 144 PINHRFNYMG--RRIGGGLQQQERYKWDGGSSDESSSTRKIRAEANCPRCSKQMDLLFSN 317
           PI+   N +   RR    +  QERYKWD G SD++S TRKIRAEANCPRC+K M+L+FSN
Sbjct: 34  PISTHLNMVAGHRRREAPVGVQERYKWDRGGSDDNS-TRKIRAEANCPRCTKDMNLVFSN 92

Query: 318 R---------------GDRDKGYYQAINLCPTCKTAYYFRPHKLLPLQGT 422
           R               G+++KGY Q++NLCP+CKTAYYFRP+   PLQGT
Sbjct: 93  RHFPTPSSESELGGGGGEKEKGY-QSVNLCPSCKTAYYFRPYDTTPLQGT 141


>ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
           [Ricinus communis] gi|223541002|gb|EEF42560.1|
           ATP-dependent clp protease ATP-binding subunit clpx,
           putative [Ricinus communis]
          Length = 698

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/122 (47%), Positives = 70/122 (57%), Gaps = 26/122 (21%)
 Frame = +3

Query: 135 PSSPINHRFNYMG----RRIGGGLQQQERYKWDGGS--SDESSSTRKIRAEANCPRCSKQ 296
           P S I+  FNY+     RR    +  QERYKWDG    ++ +S  RKIRAE+NCPRCSK 
Sbjct: 30  PVSTISTYFNYLNIGCNRRRESLIGLQERYKWDGNGDGNNNNSDVRKIRAESNCPRCSKH 89

Query: 297 MDLLFSNR--------------------GDRDKGYYQAINLCPTCKTAYYFRPHKLLPLQ 416
           MDLLFSNR                           YQA+N CP+CKTAYYFRP+K+ PLQ
Sbjct: 90  MDLLFSNRHFPSPSSNNNPNLDSTSNNNNCNTNNTYQAVNFCPSCKTAYYFRPYKITPLQ 149

Query: 417 GT 422
           G+
Sbjct: 150 GS 151