BLASTX nr result

ID: Coptis23_contig00014782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014782
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39437.3| unnamed protein product [Vitis vinifera]              268   1e-69
ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 hom...   268   1e-69
ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|2...   261   9e-68
ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 hom...   261   2e-67
ref|XP_003621733.1| Coiled-coil domain-containing protein MTMR15...   258   1e-66

>emb|CBI39437.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  268 bits (684), Expect = 1e-69
 Identities = 123/154 (79%), Positives = 137/154 (88%)
 Frame = +2

Query: 5    DVPDVFHTKFQTAPLDLETDKFYIARKCMIESHLQNVHGGMAEEILITSWESHVGTSCRG 184
            DVP+VFHT+FQTAPLDLET  FY+ RK +IESHL+ ++  MAEEILITSWESHVG +CRG
Sbjct: 795  DVPNVFHTRFQTAPLDLETQNFYVMRKSLIESHLEKINSDMAEEILITSWESHVGVACRG 854

Query: 185  VNWDQHSLADLRAAVTCVGGPCLASLCRLLAQDYRSWSRGMPDLFLWRFVGEYTGEAKLV 364
            VNWD+HSL++LRAAVTC+GGPCLAS+CR LAQDYRSWS GMPDL LWRF  +Y GEAKLV
Sbjct: 855  VNWDRHSLSELRAAVTCIGGPCLASICRHLAQDYRSWSSGMPDLLLWRFHEDYKGEAKLV 914

Query: 365  EVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVSP 466
            EVKGPRDRLSEQQRAWLLLLMD GFN EVCKV P
Sbjct: 915  EVKGPRDRLSEQQRAWLLLLMDYGFNVEVCKVGP 948


>ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]
          Length = 955

 Score =  268 bits (684), Expect = 1e-69
 Identities = 123/154 (79%), Positives = 137/154 (88%)
 Frame = +2

Query: 5    DVPDVFHTKFQTAPLDLETDKFYIARKCMIESHLQNVHGGMAEEILITSWESHVGTSCRG 184
            DVP+VFHT+FQTAPLDLET  FY+ RK +IESHL+ ++  MAEEILITSWESHVG +CRG
Sbjct: 799  DVPNVFHTRFQTAPLDLETQNFYVMRKSLIESHLEKINSDMAEEILITSWESHVGVACRG 858

Query: 185  VNWDQHSLADLRAAVTCVGGPCLASLCRLLAQDYRSWSRGMPDLFLWRFVGEYTGEAKLV 364
            VNWD+HSL++LRAAVTC+GGPCLAS+CR LAQDYRSWS GMPDL LWRF  +Y GEAKLV
Sbjct: 859  VNWDRHSLSELRAAVTCIGGPCLASICRHLAQDYRSWSSGMPDLLLWRFHEDYKGEAKLV 918

Query: 365  EVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVSP 466
            EVKGPRDRLSEQQRAWLLLLMD GFN EVCKV P
Sbjct: 919  EVKGPRDRLSEQQRAWLLLLMDYGFNVEVCKVGP 952


>ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|222844623|gb|EEE82170.1|
            predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  261 bits (668), Expect = 9e-68
 Identities = 124/154 (80%), Positives = 134/154 (87%)
 Frame = +2

Query: 2    TDVPDVFHTKFQTAPLDLETDKFYIARKCMIESHLQNVHGGMAEEILITSWESHVGTSCR 181
            +D+P+VF  +FQTAPLDLETD FY ARK +IES LQ ++ G AE ILITSWE H GT+CR
Sbjct: 869  SDLPNVFRNRFQTAPLDLETDNFYPARKSLIESQLQKIYDGTAEMILITSWELHSGTACR 928

Query: 182  GVNWDQHSLADLRAAVTCVGGPCLASLCRLLAQDYRSWSRGMPDLFLWRFVGEYTGEAKL 361
            GVNWD+HSL +LRAAVTCVGGPCLASLCR LAQDYRSWS GMPDL LWRF GEY GEAKL
Sbjct: 929  GVNWDRHSLPELRAAVTCVGGPCLASLCRHLAQDYRSWSSGMPDLLLWRFHGEYKGEAKL 988

Query: 362  VEVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVS 463
            VEVKGPRD LSEQQRAWLLLLMDCGFN EVCKVS
Sbjct: 989  VEVKGPRDCLSEQQRAWLLLLMDCGFNTEVCKVS 1022


>ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 homolog [Cucumis sativus]
            gi|449506836|ref|XP_004162862.1| PREDICTED:
            fanconi-associated nuclease 1 homolog [Cucumis sativus]
          Length = 949

 Score =  261 bits (666), Expect = 2e-67
 Identities = 121/155 (78%), Positives = 134/155 (86%)
 Frame = +2

Query: 2    TDVPDVFHTKFQTAPLDLETDKFYIARKCMIESHLQNVHGGMAEEILITSWESHVGTSCR 181
            +DVP+VF TKFQTAPLD  TD FYI R+  IES LQ +  GM EEILITSWESH GTSC 
Sbjct: 794  SDVPNVFRTKFQTAPLDFGTDSFYILRQNSIESQLQKIQDGMGEEILITSWESHKGTSCN 853

Query: 182  GVNWDQHSLADLRAAVTCVGGPCLASLCRLLAQDYRSWSRGMPDLFLWRFVGEYTGEAKL 361
            GVNWD+HSLA+LRAAVTC+GGPC+ASLCR LAQDYRSWS GMPDL LWRF  EY+GEAKL
Sbjct: 854  GVNWDRHSLAELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYSGEAKL 913

Query: 362  VEVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVSP 466
            VEVKGP+DRLSEQQRAW+LLLMDCGF  EVCK++P
Sbjct: 914  VEVKGPKDRLSEQQRAWILLLMDCGFIIEVCKITP 948


>ref|XP_003621733.1| Coiled-coil domain-containing protein MTMR15 [Medicago truncatula]
            gi|355496748|gb|AES77951.1| Coiled-coil domain-containing
            protein MTMR15 [Medicago truncatula]
          Length = 922

 Score =  258 bits (659), Expect = 1e-66
 Identities = 118/154 (76%), Positives = 132/154 (85%)
 Frame = +2

Query: 5    DVPDVFHTKFQTAPLDLETDKFYIARKCMIESHLQNVHGGMAEEILITSWESHVGTSCRG 184
            DVP+VF+T+FQ APLDL TD FY ARK ++ESH+Q +  GMAEE LI SWE+H GTSCRG
Sbjct: 768  DVPNVFYTRFQNAPLDLGTDSFYTARKSIVESHMQQIRDGMAEEFLIKSWETHNGTSCRG 827

Query: 185  VNWDQHSLADLRAAVTCVGGPCLASLCRLLAQDYRSWSRGMPDLFLWRFVGEYTGEAKLV 364
            VNWD+HSL +LRAAVTCVGG CLAS C LL +DYRSWS GMPDL LWRF GEY+GEAKLV
Sbjct: 828  VNWDRHSLDELRAAVTCVGGSCLASFCLLLCEDYRSWSSGMPDLLLWRFCGEYSGEAKLV 887

Query: 365  EVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVSP 466
            EVKGP+DRLSEQQRAWLL+LMDCGF  EVCKV P
Sbjct: 888  EVKGPKDRLSEQQRAWLLMLMDCGFMVEVCKVKP 921


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