BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014750
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   174   9e-42
emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]   173   1e-41
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   171   7e-41
gb|AFK45606.1| unknown [Lotus japonicus]                              169   2e-40
ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycin...   169   2e-40

>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/86 (96%), Positives = 86/86 (100%)
 Frame = -3

Query: 259 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILLVQEHN 80
           MVNS++VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVEAILLVQEHN
Sbjct: 1   MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 79  HPHILLLQIGNTFCKLPGGRLKPGEN 2
           HPHILLLQIGNTFCKLPGGRLKPGEN
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGEN 86


>emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]
          Length = 244

 Score =  173 bits (439), Expect = 1e-41
 Identities = 83/91 (91%), Positives = 87/91 (95%)
 Frame = -3

Query: 274 EREKKMVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILL 95
           E  ++MV S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVEAILL
Sbjct: 31  EARREMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 90

Query: 94  VQEHNHPHILLLQIGNTFCKLPGGRLKPGEN 2
           VQEHNHPHILLLQIGNTFCKLPGGRLKPGEN
Sbjct: 91  VQEHNHPHILLLQIGNTFCKLPGGRLKPGEN 121


>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/86 (95%), Positives = 84/86 (97%)
 Frame = -3

Query: 259 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILLVQEHN 80
           MV S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVEAILLVQEHN
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 79  HPHILLLQIGNTFCKLPGGRLKPGEN 2
           HPHILLLQIGNTFCKLPGGRLKPGEN
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGEN 86


>gb|AFK45606.1| unknown [Lotus japonicus]
          Length = 200

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = -3

Query: 259 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILLVQEHN 80
           MV+S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVE ILLVQEHN
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 79  HPHILLLQIGNTFCKLPGGRLKPGEN 2
           HPHILLLQIGNTFCKLPGGRLKPGEN
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGEN 86


>ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
           gi|255627433|gb|ACU14061.1| unknown [Glycine max]
          Length = 200

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = -3

Query: 259 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILLVQEHN 80
           MV+S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVE ILLVQEHN
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 79  HPHILLLQIGNTFCKLPGGRLKPGEN 2
           HPHILLLQIGNTFCKLPGGRLKPGEN
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGEN 86