BLASTX nr result

ID: Coptis23_contig00014739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014739
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307596.1| predicted protein [Populus trichocarpa] gi|2...    92   8e-17
ref|XP_002282896.2| PREDICTED: non-specific lipid-transfer prote...    90   5e-16
ref|XP_003632312.1| PREDICTED: non-specific lipid-transfer prote...    88   2e-15
ref|XP_002517108.1| Nonspecific lipid-transfer protein A precurs...    87   4e-15
gb|AFK43474.1| unknown [Lotus japonicus]                               86   1e-14

>ref|XP_002307596.1| predicted protein [Populus trichocarpa] gi|222857045|gb|EEE94592.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 65/169 (38%), Positives = 81/169 (47%)
 Frame = -3

Query: 647 MALKMIEMALTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 468
           MA++ +E+ LT   +  L + GA+AQ            PCLNYITGN             
Sbjct: 1   MAVRRMEVMLTISFIATL-WAGAMAQSSCTNVIISMS-PCLNYITGNSSTPSSSCCTQLA 58

Query: 467 XXXXXQPQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCNNXXXXXXXXXX 288
                QPQCLC+V            +NQT AL LPSAC VQTP IS+CN           
Sbjct: 59  NVVKSQPQCLCEVVNGGASSLGVN-VNQTQALALPSACNVQTPSISRCN----ASSPTDS 113

Query: 287 XXXXXXXSVPGNGPKTVPTTNVDSSNASSATLPSIILFFCLFIASYAST 141
                     G G KTVP+T+  +S+A+S  L   +LFF LFI S AST
Sbjct: 114 PAGTPNSPSAGTGSKTVPSTDNGTSDANSTKLTMSLLFFLLFITSQAST 162


>ref|XP_002282896.2| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Vitis vinifera]
          Length = 171

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 64/170 (37%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
 Frame = -3

Query: 647 MALKMIEMALTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 468
           MA   + + L  + VTML + G  AQ            PCLNYI+GN             
Sbjct: 1   MARTALAVGLVLVAVTML-WPGTAAQSSCTSVIISMS-PCLNYISGNSSTPSSGCCTQLA 58

Query: 467 XXXXXQPQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCNNXXXXXXXXXX 288
                QPQCLC+V            INQT AL LP AC VQTPP+S+CN           
Sbjct: 59  SVVRSQPQCLCEVLNGGGSSVGIN-INQTQALALPGACNVQTPPLSRCNGNAASPADSPA 117

Query: 287 XXXXXXXSVPGN-GPKTVPTTNVDSSNASSATLPSIILFFCLFIASYAST 141
                  +VP + G KTVP+T+  +SN SS      +LF  L  ASYAST
Sbjct: 118 AMPESPTTVPSDGGSKTVPSTDNGTSNGSSTKSSMSLLFILLIAASYAST 167


>ref|XP_003632312.1| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Vitis vinifera]
           gi|296085218|emb|CBI28713.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 65/169 (38%), Positives = 78/169 (46%)
 Frame = -3

Query: 647 MALKMIEMALTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 468
           MA   +E  LT +LV  L + GA+AQ            PCLNYITGN             
Sbjct: 1   MAEPRMETVLTMILVASL-WAGAMAQSSCTNVIISMS-PCLNYITGNSSTPSSGCCTQLA 58

Query: 467 XXXXXQPQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCNNXXXXXXXXXX 288
                QPQCLC+V            INQT AL LP+AC VQTPPIS+CN           
Sbjct: 59  SVVRSQPQCLCEVLNGGGSSLGIQ-INQTQALALPTACSVQTPPISRCNASSPADSPAGT 117

Query: 287 XXXXXXXSVPGNGPKTVPTTNVDSSNASSATLPSIILFFCLFIASYAST 141
                     G+  KTVP TN DSS+ +S   P  +  F +F AS A+T
Sbjct: 118 PN-------SGSRSKTVPATNGDSSDGTSIKSPFSLTSFLVFFASCAAT 159


>ref|XP_002517108.1| Nonspecific lipid-transfer protein A precursor, putative [Ricinus
           communis] gi|223543743|gb|EEF45271.1| Nonspecific
           lipid-transfer protein A precursor, putative [Ricinus
           communis]
          Length = 164

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 66/165 (40%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
 Frame = -3

Query: 647 MALKMIEMALTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 468
           MA + + M+L   +V+ML Y GAVAQ            PCLNYITGN             
Sbjct: 1   MAHRDLAMSLALAVVSML-YAGAVAQSGCTNVLISMS-PCLNYITGNSSTPSSQCCSQLS 58

Query: 467 XXXXXQPQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCNNXXXXXXXXXX 288
                 PQCLCQV            INQT AL LP AC VQTPPIS CN           
Sbjct: 59  SVVRSSPQCLCQVLSGGGSSLGIN-INQTQALALPGACNVQTPPISSCN--AASPAASPA 115

Query: 287 XXXXXXXSVPGNGPKTVPTTNVD-SSNASSATLPSIILFFCLFIA 156
                  +  G G KTVP+T VD +S+ SS  L   +L F LF A
Sbjct: 116 GTPEIPNTPSGTGSKTVPSTEVDGTSDGSSIKLSIPLLAFLLFAA 160


>gb|AFK43474.1| unknown [Lotus japonicus]
          Length = 159

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 66/169 (39%), Positives = 77/169 (45%)
 Frame = -3

Query: 647 MALKMIEMALTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 468
           MA   + M L  +++ +L   GA AQ            PCLNYITGN             
Sbjct: 1   MAQTKMVMGLVLVVIAILC-VGAAAQSSCTSVLVNLS-PCLNYITGNSSTPSSGCCSQLA 58

Query: 467 XXXXXQPQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCNNXXXXXXXXXX 288
                QPQCLCQV            INQT AL LPSAC VQTPP SQCN           
Sbjct: 59  SVVRSQPQCLCQVLNGGGSSLGIS-INQTQALALPSACNVQTPPTSQCN-------AAAT 110

Query: 287 XXXXXXXSVPGNGPKTVPTTNVDSSNASSATLPSIILFFCLFIASYAST 141
                     G G +TVPT +  SS+ +S  L SI L F +F A+YAST
Sbjct: 111 PADSPNSDPSGTGSRTVPTPDDGSSSGNSIKL-SIPLLFIVFAATYAST 158


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