BLASTX nr result

ID: Coptis23_contig00014713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014713
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4...   298   7e-79
ref|XP_002308701.1| predicted protein [Populus trichocarpa] gi|2...   286   3e-75
ref|XP_004159256.1| PREDICTED: U-box domain-containing protein 1...   286   5e-75
ref|XP_002515439.1| ubiquitin-protein ligase, putative [Ricinus ...   283   4e-74
emb|CBI21075.3| unnamed protein product [Vitis vinifera]              272   6e-71

>ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 497

 Score =  298 bits (764), Expect = 7e-79
 Identities = 164/235 (69%), Positives = 178/235 (75%)
 Frame = -2

Query: 811 IYNLSIFPSNIMVILETDLVPFLLNTLGEMEVSERNLSILSNVVSTPEGRKAISNTADAF 632
           +YNLSI P NI VILETD V FLLNTLG+MEVSER LSILSNVVSTPEGRKAIS   DAF
Sbjct: 268 LYNLSILPLNISVILETDFVSFLLNTLGDMEVSERILSILSNVVSTPEGRKAISTVPDAF 327

Query: 631 PILIDALNWSDSPGCQEKACYILMVMAHKAYGDRQTMIEAGIAXXXXXXXXXXXXLAQKR 452
           PILID LNW+DS GCQEKA YILMVMAHK+YGDRQ MI+AGI             LAQKR
Sbjct: 328 PILIDVLNWNDSTGCQEKASYILMVMAHKSYGDRQAMIDAGIVSSLLELSLLGSTLAQKR 387

Query: 451 ASRILECLRVDKGKQITENYKGGCLGGGAVSAPICGTSSSSTGLNHRDLKQGLXXXXXXX 272
           ASRILECLRVDKGKQ++E+Y GG LG   VSAPICG+SSSS   N               
Sbjct: 388 ASRILECLRVDKGKQVSESY-GGSLGSVGVSAPICGSSSSSADPN----LSSKEAFEEEE 442

Query: 271 XXXXXERKAVKQLVQQSLHNNMRRIVKRANLPQDFIPSDHFNALTTITTSKSVPF 107
                E+KAVKQLVQQSL NNMRRIVKRANLPQDF+PSDHF ALT+ +TSKS+PF
Sbjct: 443 DMMSEEKKAVKQLVQQSLQNNMRRIVKRANLPQDFVPSDHFKALTSSSTSKSLPF 497


>ref|XP_002308701.1| predicted protein [Populus trichocarpa] gi|222854677|gb|EEE92224.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  286 bits (733), Expect = 3e-75
 Identities = 158/235 (67%), Positives = 175/235 (74%)
 Frame = -2

Query: 811 IYNLSIFPSNIMVILETDLVPFLLNTLGEMEVSERNLSILSNVVSTPEGRKAISNTADAF 632
           +YNLSI PSNI  ILETDL+ FL+ +LG+MEVSER LSILSN VSTPEGRKAIS   DAF
Sbjct: 264 LYNLSISPSNISFILETDLISFLMGSLGDMEVSERVLSILSNAVSTPEGRKAISAMPDAF 323

Query: 631 PILIDALNWSDSPGCQEKACYILMVMAHKAYGDRQTMIEAGIAXXXXXXXXXXXXLAQKR 452
           PIL+D LNW+DSPGCQEKA YILMVMAHKAYGDRQ MIEAGI             LAQKR
Sbjct: 324 PILVDVLNWTDSPGCQEKASYILMVMAHKAYGDRQAMIEAGIVSSLLELTLLGSTLAQKR 383

Query: 451 ASRILECLRVDKGKQITENYKGGCLGGGAVSAPICGTSSSSTGLNHRDLKQGLXXXXXXX 272
           ASRILECLRVDKGKQ++ NY G    G AVSAPI GT SSS+  N               
Sbjct: 384 ASRILECLRVDKGKQVSGNYGGNM--GAAVSAPIYGTPSSSSNPN----LVSKECLEETE 437

Query: 271 XXXXXERKAVKQLVQQSLHNNMRRIVKRANLPQDFIPSDHFNALTTITTSKSVPF 107
                E+KAVKQLVQQSL NNMRRIVKRANLPQDF+PS+HF +LT+ +TSKS+PF
Sbjct: 438 DMMSEEKKAVKQLVQQSLQNNMRRIVKRANLPQDFVPSEHFKSLTSSSTSKSLPF 492


>ref|XP_004159256.1| PREDICTED: U-box domain-containing protein 12-like [Cucumis
           sativus]
          Length = 506

 Score =  286 bits (731), Expect = 5e-75
 Identities = 155/235 (65%), Positives = 181/235 (77%)
 Frame = -2

Query: 811 IYNLSIFPSNIMVILETDLVPFLLNTLGEMEVSERNLSILSNVVSTPEGRKAISNTADAF 632
           ++NLSI  SNI +ILETDL+PFLLN LG+MEVSER LSILSNVVSTPEGR+AIS   DAF
Sbjct: 281 LFNLSIASSNIPIILETDLIPFLLNMLGDMEVSERILSILSNVVSTPEGRRAISIVPDAF 340

Query: 631 PILIDALNWSDSPGCQEKACYILMVMAHKAYGDRQTMIEAGIAXXXXXXXXXXXXLAQKR 452
           PIL+D LNW+DSPGCQEK  Y+LMVMAHK YG+RQTM+EAG+             LAQKR
Sbjct: 341 PILVDVLNWTDSPGCQEKGSYVLMVMAHKLYGERQTMVEAGLVSASLELTLLGSALAQKR 400

Query: 451 ASRILECLRVDKGKQITENYKGGCLGGGAVSAPICGTSSSSTGLNHRDLKQGLXXXXXXX 272
           ASRILECLR DKGKQ++E++ GG LGG AVSAPI GTSSSS   N   +++         
Sbjct: 401 ASRILECLRYDKGKQVSESF-GGNLGGAAVSAPIIGTSSSS-NCNKICVEES-------E 451

Query: 271 XXXXXERKAVKQLVQQSLHNNMRRIVKRANLPQDFIPSDHFNALTTITTSKSVPF 107
                E+KAVKQLVQQSL  NMR+IVKRANLPQDF+PS+HF +LTT +TSKS+PF
Sbjct: 452 EAMSMEKKAVKQLVQQSLQYNMRKIVKRANLPQDFVPSEHFKSLTTSSTSKSLPF 506


>ref|XP_002515439.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223545383|gb|EEF46888.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 510

 Score =  283 bits (723), Expect = 4e-74
 Identities = 156/238 (65%), Positives = 179/238 (75%), Gaps = 3/238 (1%)
 Frame = -2

Query: 811 IYNLSIFPSNIMVILETDLVPFLLNTLGEMEVSERNLSILSNVVSTPEGRKAISNTADAF 632
           +YNLSIF SN+  I+E +L+PFL+NTLG+MEVSER LSILSN+VSTPEGRKAIS   DAF
Sbjct: 282 LYNLSIFSSNVSFIVEANLIPFLMNTLGDMEVSERILSILSNLVSTPEGRKAISTMRDAF 341

Query: 631 PILIDALNWSDSPGCQEKACYILMVMAHKAYGDRQTMIEAGIAXXXXXXXXXXXXLAQKR 452
            ILID LNW+DSPGCQEKA YILMVMAHKAYGDRQ MIEAGI             LAQKR
Sbjct: 342 TILIDVLNWTDSPGCQEKASYILMVMAHKAYGDRQAMIEAGIVSALLELTLLGSTLAQKR 401

Query: 451 ASRILECLRVDKGKQITENYKGGCLGGGAVSAPICGTSSSS---TGLNHRDLKQGLXXXX 281
           ASRILECLRVDKGKQI+++Y G    G AVSAPI G+SSSS    G++   L++      
Sbjct: 402 ASRILECLRVDKGKQISDHYGGNL--GAAVSAPIYGSSSSSANPNGVSKEFLEEA----- 454

Query: 280 XXXXXXXXERKAVKQLVQQSLHNNMRRIVKRANLPQDFIPSDHFNALTTITTSKSVPF 107
                   E+KAVKQLVQQSL  NM RIVKRANLPQDF+PS+HF +LT  +TSKS+PF
Sbjct: 455 --EDTMSEEKKAVKQLVQQSLQTNMMRIVKRANLPQDFVPSEHFKSLTASSTSKSLPF 510


>emb|CBI21075.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  272 bits (696), Expect = 6e-71
 Identities = 154/235 (65%), Positives = 168/235 (71%)
 Frame = -2

Query: 811 IYNLSIFPSNIMVILETDLVPFLLNTLGEMEVSERNLSILSNVVSTPEGRKAISNTADAF 632
           +YNLSI P NI VILETD V FLLNTLG+MEVSER LSILSNVVSTPEGRKAIS   DAF
Sbjct: 268 LYNLSILPLNISVILETDFVSFLLNTLGDMEVSERILSILSNVVSTPEGRKAISTVPDAF 327

Query: 631 PILIDALNWSDSPGCQEKACYILMVMAHKAYGDRQTMIEAGIAXXXXXXXXXXXXLAQKR 452
           PILID LNW+DS GCQEKA YILMVMAHK+YGDRQ MI+AGI             LAQKR
Sbjct: 328 PILIDVLNWNDSTGCQEKASYILMVMAHKSYGDRQAMIDAGIVSSLLELSLLGSTLAQKR 387

Query: 451 ASRILECLRVDKGKQITENYKGGCLGGGAVSAPICGTSSSSTGLNHRDLKQGLXXXXXXX 272
           ASRILECLRVDKGKQ++E+Y GG LG              S      D+           
Sbjct: 388 ASRILECLRVDKGKQVSESY-GGSLG--------------SAFEEEEDMMS--------- 423

Query: 271 XXXXXERKAVKQLVQQSLHNNMRRIVKRANLPQDFIPSDHFNALTTITTSKSVPF 107
                E+KAVKQLVQQSL NNMRRIVKRANLPQDF+PSDHF ALT+ +TSKS+PF
Sbjct: 424 ----EEKKAVKQLVQQSLQNNMRRIVKRANLPQDFVPSDHFKALTSSSTSKSLPF 474


Top