BLASTX nr result

ID: Coptis23_contig00014707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014707
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322732.1| predicted protein [Populus trichocarpa] gi|2...   227   5e-57
ref|XP_002275794.1| PREDICTED: thioredoxin-like 3-1, chloroplast...   216   1e-53
ref|XP_003625285.1| Thioredoxin-like protein [Medicago truncatul...   213   9e-53
ref|XP_004146393.1| PREDICTED: thioredoxin-like 3-1, chloroplast...   209   1e-51
ref|XP_003554219.1| PREDICTED: thioredoxin-like 3-1, chloroplast...   207   4e-51

>ref|XP_002322732.1| predicted protein [Populus trichocarpa] gi|222867362|gb|EEF04493.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  227 bits (578), Expect = 5e-57
 Identities = 115/194 (59%), Positives = 136/194 (70%), Gaps = 3/194 (1%)
 Frame = +3

Query: 126 MAVSVANSHIFCREICY-SKDQNQQQWXXXXXXXXXXXXXXXXXXXXXXEIKRKE--HRF 296
           M+V  AN H+  RE+ Y +KDQ QQ W                      + + K+   + 
Sbjct: 1   MSVLAANPHVLYREVQYHNKDQQQQLWSGGGVGSSLLLSQRTSFGCSWFDGRNKDLCKKN 60

Query: 297 SNISVKGQAFWQGTAKPTTLEMEAISSVEHLDQILIEAQEQSQPVIIDWMAAWCRKCIYL 476
           S   +K  A W G  +PT++EME I    HLD+IL++A E SQP+IIDWMA+WCRKCIYL
Sbjct: 61  SKRDLKVAASWPGMTRPTSVEMEPIDDSHHLDKILLQAHELSQPIIIDWMASWCRKCIYL 120

Query: 477 KPKLEKLAAEYDTKVKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEVIGGHKAW 656
           KPKLEKLAAEYDTK+KFY VDVN V Q LVKRGNISKMPTIQLWKDGEMK EVIGGHKAW
Sbjct: 121 KPKLEKLAAEYDTKIKFYCVDVNKVPQALVKRGNISKMPTIQLWKDGEMKAEVIGGHKAW 180

Query: 657 LVIDEVREMIQKFI 698
           LV++EVREMIQKF+
Sbjct: 181 LVMEEVREMIQKFV 194


>ref|XP_002275794.1| PREDICTED: thioredoxin-like 3-1, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 185

 Score =  216 bits (549), Expect = 1e-53
 Identities = 111/191 (58%), Positives = 128/191 (67%)
 Frame = +3

Query: 126 MAVSVANSHIFCREICYSKDQNQQQWXXXXXXXXXXXXXXXXXXXXXXEIKRKEHRFSNI 305
           M++  AN+HI  RE+     QNQ                           K K+  F   
Sbjct: 1   MSILAANTHIVYREVLLRDPQNQLSGGGSCLFWSRSPGFGVDGRRGEWR-KTKKRDF--- 56

Query: 306 SVKGQAFWQGTAKPTTLEMEAISSVEHLDQILIEAQEQSQPVIIDWMAAWCRKCIYLKPK 485
             + +AFW    +P  +EM+ I   + LDQIL  AQE  QP+IIDWMAAWCRKCIYLKPK
Sbjct: 57  --RVEAFWPDMTRPNVIEMQPIKDCDQLDQILARAQELPQPIIIDWMAAWCRKCIYLKPK 114

Query: 486 LEKLAAEYDTKVKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEVIGGHKAWLVI 665
           LEKLAAEYDTK+KFY VDVNNVSQ LVKRGNI+KMPTIQLWKDGEMK EVIGGHKAW+VI
Sbjct: 115 LEKLAAEYDTKIKFYSVDVNNVSQALVKRGNITKMPTIQLWKDGEMKAEVIGGHKAWIVI 174

Query: 666 DEVREMIQKFI 698
           DEVREMI+KF+
Sbjct: 175 DEVREMIKKFV 185


>ref|XP_003625285.1| Thioredoxin-like protein [Medicago truncatula]
           gi|355500300|gb|AES81503.1| Thioredoxin-like protein
           [Medicago truncatula]
          Length = 187

 Score =  213 bits (541), Expect = 9e-53
 Identities = 101/141 (71%), Positives = 118/141 (83%)
 Frame = +3

Query: 276 KRKEHRFSNISVKGQAFWQGTAKPTTLEMEAISSVEHLDQILIEAQEQSQPVIIDWMAAW 455
           K+K+ R  N+ V  +A W   ++P+++EMEAI   E LDQIL+ AQ+ S+P++IDWMAAW
Sbjct: 49  KQKKIRRKNLRV--EAMWPDLSRPSSVEMEAIHDSEQLDQILVHAQQNSEPILIDWMAAW 106

Query: 456 CRKCIYLKPKLEKLAAEYDTKVKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEV 635
           CRKCIYLKPKLEKLAAE+DTK KFYYVDVN V Q LVKRG ISKMPTIQLWKDGEMKEEV
Sbjct: 107 CRKCIYLKPKLEKLAAEFDTKAKFYYVDVNKVPQTLVKRGKISKMPTIQLWKDGEMKEEV 166

Query: 636 IGGHKAWLVIDEVREMIQKFI 698
           IGGHK WLVI+EVREMIQ +I
Sbjct: 167 IGGHKGWLVIEEVREMIQNYI 187


>ref|XP_004146393.1| PREDICTED: thioredoxin-like 3-1, chloroplastic-like [Cucumis
           sativus]
          Length = 176

 Score =  209 bits (531), Expect = 1e-51
 Identities = 99/138 (71%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
 Frame = +3

Query: 285 EHRFSNISVKGQA-FWQGTAKPTTLEMEAISSVEHLDQILIEAQEQSQPVIIDWMAAWCR 461
           +HR   + +K +A FW   ++P ++EME+I   + LD+ILI AQ  SQP++IDWMA WCR
Sbjct: 37  DHRRRELRIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCR 96

Query: 462 KCIYLKPKLEKLAAEYDTKVKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEVIG 641
           KCIYLKPKLEKLAA+Y TK KFYYVDVN V Q LVKRGNISKMPTIQLWKDGEMK EVIG
Sbjct: 97  KCIYLKPKLEKLAADYVTKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIG 156

Query: 642 GHKAWLVIDEVREMIQKF 695
           GHKAWLVI+EVREMIQKF
Sbjct: 157 GHKAWLVIEEVREMIQKF 174


>ref|XP_003554219.1| PREDICTED: thioredoxin-like 3-1, chloroplastic-like isoform 2
           [Glycine max]
          Length = 188

 Score =  207 bits (527), Expect = 4e-51
 Identities = 106/191 (55%), Positives = 127/191 (66%)
 Frame = +3

Query: 126 MAVSVANSHIFCREICYSKDQNQQQWXXXXXXXXXXXXXXXXXXXXXXEIKRKEHRFSNI 305
           M+V  A SH    E+ Y KDQ   Q+                        ++ E +    
Sbjct: 1   MSVIGAYSHFLYGEV-YQKDQQCPQYLVSGRGYLFSHKSSCGSIWVGS--RKSEGKIKRR 57

Query: 306 SVKGQAFWQGTAKPTTLEMEAISSVEHLDQILIEAQEQSQPVIIDWMAAWCRKCIYLKPK 485
           +++ +A W   ++P  LEME IS  E LDQIL+ AQ+ SQP++IDWMA WCRKCIYLKPK
Sbjct: 58  NLRVEAMWPDLSRPNELEMEEISDSEQLDQILVHAQQNSQPILIDWMATWCRKCIYLKPK 117

Query: 486 LEKLAAEYDTKVKFYYVDVNNVSQLLVKRGNISKMPTIQLWKDGEMKEEVIGGHKAWLVI 665
           LEKLA EY  K KFY+VDVN V Q LVKRGNISKMPTIQLWKDGEMK EVIGGHKAWLV+
Sbjct: 118 LEKLAPEYHNKAKFYFVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVM 177

Query: 666 DEVREMIQKFI 698
           +EVREMIQK++
Sbjct: 178 EEVREMIQKYL 188


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