BLASTX nr result

ID: Coptis23_contig00014704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014704
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276622.1| PREDICTED: calvin cycle protein CP12-like is...   160   8e-38
emb|CBI40783.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002301892.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_002510743.1| conserved hypothetical protein [Ricinus comm...   148   4e-34
gb|ABK26381.1| unknown [Picea sitchensis]                             128   6e-28

>ref|XP_002276622.1| PREDICTED: calvin cycle protein CP12-like isoform 1 [Vitis
           vinifera] gi|359491885|ref|XP_003634338.1| PREDICTED:
           calvin cycle protein CP12-like isoform 2 [Vitis
           vinifera]
          Length = 134

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/102 (75%), Positives = 90/102 (88%), Gaps = 2/102 (1%)
 Frame = +3

Query: 135 ISLPIRISR--NSYVKAMGVLKYKGTQMREKKLTELIEKKVLEAKEVCQGDEKSDGCKVA 308
           +S P+R  +  N  VKAMGV+K+KGTQMREK+LTELIEKKVLEAK+VC+GDE SD CKVA
Sbjct: 33  VSRPLRSPKKVNLCVKAMGVVKFKGTQMREKQLTELIEKKVLEAKQVCEGDETSDECKVA 92

Query: 309 WDEVEEISQAKADLRRRLEKEDPLEYFCSENPETDECRIYED 434
           WDEVEE+SQAKADLRR++EKEDPLE +C ENPE +ECRIYED
Sbjct: 93  WDEVEEVSQAKADLRRKMEKEDPLESYCQENPENEECRIYED 134


>emb|CBI40783.3| unnamed protein product [Vitis vinifera]
          Length = 94

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/85 (82%), Positives = 80/85 (94%)
 Frame = +3

Query: 180 MGVLKYKGTQMREKKLTELIEKKVLEAKEVCQGDEKSDGCKVAWDEVEEISQAKADLRRR 359
           MGV+K+KGTQMREK+LTELIEKKVLEAK+VC+GDE SD CKVAWDEVEE+SQAKADLRR+
Sbjct: 10  MGVVKFKGTQMREKQLTELIEKKVLEAKQVCEGDETSDECKVAWDEVEEVSQAKADLRRK 69

Query: 360 LEKEDPLEYFCSENPETDECRIYED 434
           +EKEDPLE +C ENPE +ECRIYED
Sbjct: 70  MEKEDPLESYCQENPENEECRIYED 94


>ref|XP_002301892.1| predicted protein [Populus trichocarpa] gi|222843618|gb|EEE81165.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  152 bits (384), Expect = 3e-35
 Identities = 68/84 (80%), Positives = 78/84 (92%)
 Frame = +3

Query: 183 GVLKYKGTQMREKKLTELIEKKVLEAKEVCQGDEKSDGCKVAWDEVEEISQAKADLRRRL 362
           GV K+KGTQMREK+L E+IEKKV+EAKEVC+GDE SD CKVAWDEVEE+SQAKAD RRRL
Sbjct: 65  GVAKFKGTQMREKQLAEMIEKKVVEAKEVCEGDETSDECKVAWDEVEEVSQAKADFRRRL 124

Query: 363 EKEDPLEYFCSENPETDECRIYED 434
           EK+DPLEY+C +NPETDECR+YED
Sbjct: 125 EKQDPLEYYCQDNPETDECRVYED 148


>ref|XP_002510743.1| conserved hypothetical protein [Ricinus communis]
           gi|223551444|gb|EEF52930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 142

 Score =  148 bits (374), Expect = 4e-34
 Identities = 81/133 (60%), Positives = 94/133 (70%), Gaps = 5/133 (3%)
 Frame = +3

Query: 48  ATVAASSFLSTSPNTQSSFNEPIFFKFTSISLPIRISR----NSYVKAMG-VLKYKGTQM 212
           A    +S LS+S     S N    F  +SI L  R       N  V+AMG   K+KGTQM
Sbjct: 12  APARGTSILSSSSFLPRSCN---IFTNSSICLKRRTENKGGMNLRVEAMGGAPKFKGTQM 68

Query: 213 REKKLTELIEKKVLEAKEVCQGDEKSDGCKVAWDEVEEISQAKADLRRRLEKEDPLEYFC 392
           REK LTE+IEKKV+EAKEVC+GD+ SD CKVAWDEVEE+SQAKAD R +LEK DPLEYFC
Sbjct: 69  REKHLTEMIEKKVMEAKEVCEGDQTSDECKVAWDEVEEVSQAKADFRLKLEKRDPLEYFC 128

Query: 393 SENPETDECRIYE 431
            +NPETDECR+YE
Sbjct: 129 QDNPETDECRVYE 141


>gb|ABK26381.1| unknown [Picea sitchensis]
          Length = 135

 Score =  128 bits (321), Expect = 6e-28
 Identities = 59/83 (71%), Positives = 73/83 (87%)
 Frame = +3

Query: 186 VLKYKGTQMREKKLTELIEKKVLEAKEVCQGDEKSDGCKVAWDEVEEISQAKADLRRRLE 365
           V K+KGT +RE+KL++LI +KV EA+EVCQG+E SD C+VAWDEVEE+SQAKA LR+R +
Sbjct: 53  VPKFKGTYVREQKLSDLIVEKVGEAQEVCQGNESSDECRVAWDEVEEVSQAKAHLRQRSQ 112

Query: 366 KEDPLEYFCSENPETDECRIYED 434
           K+DPLE +C ENPETDECRIYED
Sbjct: 113 KDDPLEAYCKENPETDECRIYED 135


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