BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014702
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]    62   5e-08
dbj|BAK05086.1| predicted protein [Hordeum vulgare subsp. vulgare]     61   8e-08
ref|XP_003610841.1| F-box/kelch-repeat protein [Medicago truncat...    60   2e-07
gb|AFK37781.1| unknown [Lotus japonicus]                               57   2e-06
ref|NP_174520.1| putative F-box protein [Arabidopsis thaliana] g...    56   3e-06

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 48/151 (31%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
 Frame = -3

Query: 408 ICTPLPLDYSAIRTRYCNGLLCFRDWDRGFFCIL-NPLTHEKLYLPENKKQPY-----FE 247
           I  P  L  + I    CNGLLC    +     I+ NP+T + + LPE+    Y       
Sbjct: 94  IALPTVLGRNLIVMSSCNGLLCLASEESPNPVIISNPITRKYIVLPESVNASYSFIQLVG 153

Query: 246 FGFHPLTEKYKVWGW----ANYPHCEIYTLGTTSWRPVTSLPVDGCGRFSTSCFCFNGTF 79
            G+ P   KYKV       + +   EI TLG  SWR +       CGR S   +C    +
Sbjct: 154 LGYDPWNMKYKVVRSYIDNSKFTRFEIITLGEASWRQLDVPCRVVCGRNSRPIYCEGALY 213

Query: 78  ------YRYTTTNMIISFDLGNESFGVIQLP 4
                 + Y     I++FDL  E FG+I LP
Sbjct: 214 WILDKKFHYDGDGCILAFDLREEKFGMIALP 244


>dbj|BAK05086.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 378

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
 Frame = -3

Query: 360 CNGLLCFRDWDRGFFCILNPLTHEKLYLPENKKQP---------YFEFGFHPLTEKYKVW 208
           CNGLLC  D  +G   +LNP T E L LP+              +   GF P T+++K+ 
Sbjct: 114 CNGLLCLGD-SKGAVELLNPTTGESLVLPKPMYTAGSSQFSSCNWHCLGFCPSTKQHKIA 172

Query: 207 GWANYPH-------CEIYTLGTTSWRPVTSL---PVDGCGRFSTSCFCFNGTFYRYTTTN 58
            +    H       CEIYT+G   WR + SL   P+D     + S +    T +RY +++
Sbjct: 173 HFYPGAHAGSLEVLCEIYTIGDRDWRQIGSLRGAPIDRGIHVNGSVYYL--TRFRYISSS 230

Query: 57  MIISFDLGNESFGVIQLP 4
            I   +L NE F V+ LP
Sbjct: 231 RINCLNLQNEKFDVLMLP 248


>ref|XP_003610841.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355512176|gb|AES93799.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 399

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 47/154 (30%), Positives = 64/154 (41%), Gaps = 35/154 (22%)
 Frame = -3

Query: 360 CNGLLCFRDWDRGFFCILNPLTHEKLYLPENKK---------------QPYFEFGFHPLT 226
           CNG+LC  +  +  F + NP   +   LP  KK               Q  F FG+  LT
Sbjct: 131 CNGILCIANDSKDLFILWNPTIRKFRELPLLKKPQEFSHKYRQFCIKPQTEFSFGYDCLT 190

Query: 225 EKYKV----------WGWANYPHCEIYTLGTTSWR-----PVTSLPVDGCGRFSTSCFCF 91
           + YKV            W N    +++TLGT  WR     P   LP D  G+  +  F  
Sbjct: 191 DNYKVIVVLKYHKSIGRWVNKIELKLHTLGTNFWRSIKKFPFGVLPYDMSGKLVSGKFVG 250

Query: 90  NG----TFYRYTTTN-MIISFDLGNESFGVIQLP 4
                  F  Y  T+  I++FDLG ES+  + LP
Sbjct: 251 GAISWLAFKPYPRTSCFIVAFDLGKESYQKVLLP 284


>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
 Frame = -3

Query: 360 CNGLLCFRDWDRGFFCILNPLTHEKLYLPENKK----------QPYFEFGFHPLTEKYKV 211
           CNGL+C  D +R +F + NP+T E + LP+  +          + Y  FGF P   +YKV
Sbjct: 181 CNGLICLCDRERDYFVVCNPITGEFIRLPQTSRIGKTNKFSIQEIYAGFGFQPKNNEYKV 240

Query: 210 -------WGWANYPHCEIYTLGTTSWR--PVTSLPVDGCGRFSTSCFCFNGTFY---RYT 67
                    +      E++TLGT++WR   V S+      RF T   C +G  +    Y 
Sbjct: 241 VRILRGLQFYHGIMAAEVHTLGTSTWRNVEVNSMYFYHL-RFPT---CVSGALHWIGSYH 296

Query: 66  TTNMIISFDLGNESFGVIQLP 4
            T  I+ FD  +E F     P
Sbjct: 297 GTLSILCFDFESERFRSFPTP 317


>ref|NP_174520.1| putative F-box protein [Arabidopsis thaliana]
           gi|75264179|sp|Q9LQL5.1|FB30_ARATH RecName:
           Full=Putative F-box protein At1g32420
           gi|8920618|gb|AAF81340.1|AC007767_20 Contains similarity
           to a hypothetical protein F6D8.29 gi|5903056 from
           Arabidopsis thaliana BAC F6D8 gb|AC008016 [Arabidopsis
           thaliana] gi|332193364|gb|AEE31485.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 302

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 17/150 (11%)
 Frame = -3

Query: 399 PLPLDYSAIRTR-----YCNGLLCFRDWDRGFFCILNPLTHEKLYLPENKKQPYFE---F 244
           P   D  ++ TR     Y  GL+C          I NP T +   +P+  +  Y E   F
Sbjct: 114 PQNTDKESLTTRASSYHYVRGLICCWSHCPTTVDIYNPTTRQYYTVPDTNRYQYIETCFF 173

Query: 243 GFHPLTEKYKVWGWANY----PHCEIYTLGTTSWRPVTSLPVDGCGRFSTSCFCFNGTFY 76
           G+ P+  +YKV     Y      C+++T+G    +P   +   G         C NG  Y
Sbjct: 174 GYDPVENQYKVMVLPKYYMEESPCQVFTVGDPIEKPWRDIQGIGVHFLLKDAVCINGVIY 233

Query: 75  -----RYTTTNMIISFDLGNESFGVIQLPE 1
                 Y +T  ++SFD+ +E F  ++ P+
Sbjct: 234 YQATNEYGSTYFLVSFDVRSEKFNHVKAPK 263