BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014697
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   186   1e-44
ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|2235417...   182   1e-43
ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   182   2e-43
ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   180   6e-43
ref|XP_002262822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   179   8e-43

>ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
          Length = 253

 Score =  186 bits (471), Expect = 1e-44
 Identities = 103/213 (48%), Positives = 129/213 (60%), Gaps = 8/213 (3%)
 Frame = +2

Query: 8   GCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQQQCPVCKADVLDNT 187
           G FDCNICLD A DPVVTLCGHLYCWPCIYKW++  STS   + QQQ CPVCKA++   +
Sbjct: 41  GSFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLHVQSTSPVTE-QQQNCPVCKANISHTS 99

Query: 188 LVPLYGRGQVSPDAEPNSKDSLDLEIPRRPPAHGVHALITT--------NPNQQLHTRPD 343
           LVPLYGRG  SP      K  +   IPRRPPAHGVH LITT        +P++ LH  P 
Sbjct: 100 LVPLYGRGP-SPSESETKKLHVGPAIPRRPPAHGVHTLITTTTSASLNSHPSRHLHPNPF 158

Query: 344 SSQSQFESDHNQNQQYNAPANSVASPMLSLRGTTAHPMIWQFGDIVSTTVFRNPTEVGFF 523
            S SQ+         Y   A   A+P L+   +  +P I  FG++V + +F   ++   F
Sbjct: 159 QSHSQYFP-----HPYGGYA---ATPTLT---SVLNPTIGMFGEMVFSRMF-GSSDTSLF 206

Query: 524 GYPSPYHQQLVGSSSPRARRQEMKDDESLNRIS 622
            YP P    L+ S++PR RRQEM+ D  LNR+S
Sbjct: 207 AYPYPNTYPLMASANPRMRRQEMQLDRCLNRVS 239


>ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|223541719|gb|EEF43267.1| rnf5,
           putative [Ricinus communis]
          Length = 241

 Score =  182 bits (462), Expect = 1e-43
 Identities = 100/211 (47%), Positives = 128/211 (60%), Gaps = 6/211 (2%)
 Frame = +2

Query: 8   GCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQQQCPVCKADVLDNT 187
           GCFDCNIC D+A +PVVTLCGHLYCWPCIYKW++  S S  +D +  QCPVCKAD+   T
Sbjct: 26  GCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASIASD-EHPQCPVCKADISHTT 84

Query: 188 LVPLYGRGQVSPDAEPNSKDSL-DLEIPRRPPAHGVHALITTNPNQQLHTRPDSSQSQFE 364
           +VPLYGRGQ   +AE   K S     IP RP A G  ALI++      HT          
Sbjct: 85  MVPLYGRGQAPAEAEIEGKASCRGTAIPPRPSACGAQALISS----PQHTAQQLPYHNPY 140

Query: 365 SDHNQN-QQYNAPANSVASPMLSLRGTTA----HPMIWQFGDIVSTTVFRNPTEVGFFGY 529
            +HN     Y++   +  SP+L+L G+      HP +  FG++V   VF N   +  + Y
Sbjct: 141 QNHNYTPDPYSSFEEASQSPLLNLGGSAVTGFHHPFVGMFGEMVYARVFGNSDSL--YAY 198

Query: 530 PSPYHQQLVGSSSPRARRQEMKDDESLNRIS 622
            + YH  L+GS+SPR RRQEM+ D+SLNRIS
Sbjct: 199 RNSYH--LMGSNSPRLRRQEMQADKSLNRIS 227


>ref|XP_003543049.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  182 bits (461), Expect = 2e-43
 Identities = 98/205 (47%), Positives = 131/205 (63%)
 Frame = +2

Query: 8   GCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQQQCPVCKADVLDNT 187
           GCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S   D +  QCPVCKAD+ ++T
Sbjct: 26  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLPPD-EHPQCPVCKADISNST 84

Query: 188 LVPLYGRGQVSPDAEPNSKDSLDLEIPRRPPAHGVHALITTNPNQQLHTRPDSSQSQFES 367
           +VPLYGRG  +  AE  +  S D+ IP RP A    AL+ T+   Q     +  Q  + +
Sbjct: 85  MVPLYGRGHAATTAEGKTA-SCDVFIPPRPSASCAQALLATSQRGQHLPYRNPYQGHYFT 143

Query: 368 DHNQNQQYNAPANSVASPMLSLRGTTAHPMIWQFGDIVSTTVFRNPTEVGFFGYPSPYHQ 547
            H   ++ +A      S ML+L G+  HP+   FG++V   VF NP  +  + YP+ Y  
Sbjct: 144 SHPYQEEDDA-----TSQMLNL-GSHHHPVTGMFGEMVYARVFGNPENL--YAYPNSY-- 193

Query: 548 QLVGSSSPRARRQEMKDDESLNRIS 622
           QL+GS++PR RRQEM+  +SLNRIS
Sbjct: 194 QLMGSATPRLRRQEMQAHKSLNRIS 218


>ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  180 bits (456), Expect = 6e-43
 Identities = 98/206 (47%), Positives = 130/206 (63%), Gaps = 1/206 (0%)
 Frame = +2

Query: 8   GCFDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQQQCPVCKADVLDNT 187
           GCFDCNICLD+A +PVVTLCGHLYCWPCIYKW++  S S   D +  QCPVCKAD+ ++T
Sbjct: 26  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPD-EHPQCPVCKADISNST 84

Query: 188 LVPLYGRGQVSPDAEPNSKDSLDLEIPRRPPAHGVHALITTNPNQQLH-TRPDSSQSQFE 364
           +VPLYGRG  +         S D+ IP RP A  V AL+ T+  +  H    +  Q  + 
Sbjct: 85  MVPLYGRGHAA--TAEGKTSSCDVFIPPRPSASCVQALLATSSQRGQHLPYRNPYQGHYF 142

Query: 365 SDHNQNQQYNAPANSVASPMLSLRGTTAHPMIWQFGDIVSTTVFRNPTEVGFFGYPSPYH 544
           S H   ++ +A      S ML+L G+  HP+   FG++V   VF NP  +  + YP+ Y 
Sbjct: 143 SSHPYQEEDDA-----TSQMLNL-GSHHHPVTGMFGEMVYARVFGNPENL--YAYPNSY- 193

Query: 545 QQLVGSSSPRARRQEMKDDESLNRIS 622
            QL+GS++PR RRQEM+  +SLNRIS
Sbjct: 194 -QLMGSATPRLRRQEMQAHKSLNRIS 218


>ref|XP_002262822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 isoform 1 [Vitis
           vinifera] gi|359497380|ref|XP_003635497.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 isoform 2 [Vitis
           vinifera] gi|359497382|ref|XP_003635498.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 isoform 3 [Vitis
           vinifera] gi|147810574|emb|CAN63097.1| hypothetical
           protein VITISV_013326 [Vitis vinifera]
          Length = 240

 Score =  179 bits (455), Expect = 8e-43
 Identities = 99/210 (47%), Positives = 130/210 (61%), Gaps = 7/210 (3%)
 Frame = +2

Query: 14  FDCNICLDYARDPVVTLCGHLYCWPCIYKWIYSHSTSATADHQQQQCPVCKADVLDNTLV 193
           F+CNIC D ARDPVVTLCGHLYCWPC+YKW +  S S  +D +  QCPVCKA++   TLV
Sbjct: 28  FECNICFDSARDPVVTLCGHLYCWPCVYKWFHVQSASLASD-EHPQCPVCKAEISHTTLV 86

Query: 194 PLYGRGQVSPDAEPNSK-DSLDLEIPRRPPAHGVHALI--TTNPNQQLHTRPDSSQSQFE 364
           PLYGRGQ   + E   K     + IP RPPA G  ALI  T++  QQL  R      Q++
Sbjct: 87  PLYGRGQTPSETELEGKTHCFGMAIPPRPPACGTQALINATSHNGQQLQYRNPYQNQQYD 146

Query: 365 SDHNQNQQYNAPANSVASPMLSLRGTTA----HPMIWQFGDIVSTTVFRNPTEVGFFGYP 532
                + ++++P     S + ++ G+TA    HP +  FG++V   VF N   +  + YP
Sbjct: 147 PHPYNDYEHDSP-----SSLFNMGGSTATSFFHP-VGMFGEMVYARVFGNSESL--YAYP 198

Query: 533 SPYHQQLVGSSSPRARRQEMKDDESLNRIS 622
           + YH  L GSS+PR RRQEM+ D+SLNRIS
Sbjct: 199 NSYH--LTGSSTPRLRRQEMQADKSLNRIS 226