BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014692
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi...    62   5e-08
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]    62   5e-08
emb|CBI16890.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|NP_198689.1| pentatricopeptide repeat-containing protein [Ar...    57   2e-06

>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   RYLMITVKIYKSLNASFANDSDILRLFWGHVVERGLITKKVLNLMRQLD*N 154
           R LMIT+KIY+  +AS+A D  IL LFW HV+ER LI+K +L  ++QLD N
Sbjct: 539 RRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYIQQLDVN 589


>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   RYLMITVKIYKSLNASFANDSDILRLFWGHVVERGLITKKVLNLMRQLD*N 154
           R LMIT+KIY+  +AS+A D  IL LFW HV+ER LI+K +L  ++QLD N
Sbjct: 539 RRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYIQQLDVN 589


>emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/49 (57%), Positives = 37/49 (75%)
 Frame = +2

Query: 2   RYLMITVKIYKSLNASFANDSDILRLFWGHVVERGLITKKVLNLMRQLD 148
           R LMIT+KIY+  +AS+A D  IL LFW HV+ER LI+K +L  ++QLD
Sbjct: 532 RRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNILKYIQQLD 580


>ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|222870764|gb|EEF07895.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/44 (59%), Positives = 36/44 (81%)
 Frame = +2

Query: 8   LMITVKIYKSLNASFANDSDILRLFWGHVVERGLITKKVLNLMR 139
           LMIT+KIY+S NAS+A+D+ IL LFW HV+ER L++K +L  M+
Sbjct: 550 LMITLKIYRSFNASYASDNSILSLFWNHVLERRLMSKNILKDMQ 593


>ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g38730 gi|10176899|dbj|BAB10131.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332006971|gb|AED94354.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/47 (51%), Positives = 36/47 (76%)
 Frame = +2

Query: 2   RYLMITVKIYKSLNASFANDSDILRLFWGHVVERGLITKKVLNLMRQ 142
           R LM+ +K+YKS++AS+A D+D+LR FW HV +R LI+K +L  M +
Sbjct: 546 RRLMVNLKLYKSISASYAGDNDVLRFFWSHVGDRCLISKSILREMNR 592