BLASTX nr result

ID: Coptis23_contig00014687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014687
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18200.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-...   149   3e-34
ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-...   139   3e-31
ref|XP_002306695.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002300920.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30

>emb|CBI18200.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score =  149 bits (376), Expect = 3e-34
 Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 35/212 (16%)
 Frame = -1

Query: 531 KYHKRTKE-RAARVDGKTYHFFNQLEAIDSRPSLPPLSF--------------------- 418
           KYH+RTKE RA++ DGKTY FF+QLEA++++PSL  L                       
Sbjct: 43  KYHRRTKEGRASKADGKTYRFFDQLEALETQPSLASLPHSKPPAPAVLAATMPLANLPTT 102

Query: 417 --EIQIPN--PIPISTTVLNVTPTNPADSPQANAYQSCQNIYTSE------FISTSLSPR 268
             EI +P+  P P ++T     PT P+ +P  + +    N+ T+       F+S S S  
Sbjct: 103 LPEITVPSTLPNPTNSTANPTIPTIPSPTPPTSRHPPHNNVPTAHPAMAANFLSNSTSSS 162

Query: 267 PSLRK---KSGYMKRKWSTFFENLIEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQ 97
            S  +   + G  KRKW  FF+ L+++V+ +QE  Q +FL+ +E+ EH+ M REEAWK Q
Sbjct: 163 TSSDEELERRGKRKRKWKAFFQRLMKDVIERQEELQKRFLEAIEKREHDRMVREEAWKMQ 222

Query: 96  EMERLNREHETLVEERLAATTRNATVIAFLEK 1
           EM R+NREHE LV+ER  A  ++A VIAFL+K
Sbjct: 223 EMARMNREHELLVQERSIAAAKDAAVIAFLQK 254


>ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-2-like [Vitis vinifera]
          Length = 576

 Score =  149 bits (376), Expect = 3e-34
 Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 35/212 (16%)
 Frame = -1

Query: 531 KYHKRTKE-RAARVDGKTYHFFNQLEAIDSRPSLPPLSF--------------------- 418
           KYH+RTKE RA++ DGKTY FF+QLEA++++PSL  L                       
Sbjct: 118 KYHRRTKEGRASKADGKTYRFFDQLEALETQPSLASLPHSKPPAPAVLAATMPLANLPTT 177

Query: 417 --EIQIPN--PIPISTTVLNVTPTNPADSPQANAYQSCQNIYTSE------FISTSLSPR 268
             EI +P+  P P ++T     PT P+ +P  + +    N+ T+       F+S S S  
Sbjct: 178 LPEITVPSTLPNPTNSTANPTIPTIPSPTPPTSRHPPHNNVPTAHPAMAANFLSNSTSSS 237

Query: 267 PSLRK---KSGYMKRKWSTFFENLIEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQ 97
            S  +   + G  KRKW  FF+ L+++V+ +QE  Q +FL+ +E+ EH+ M REEAWK Q
Sbjct: 238 TSSDEELERRGKRKRKWKAFFQRLMKDVIERQEELQKRFLEAIEKREHDRMVREEAWKMQ 297

Query: 96  EMERLNREHETLVEERLAATTRNATVIAFLEK 1
           EM R+NREHE LV+ER  A  ++A VIAFL+K
Sbjct: 298 EMARMNREHELLVQERSIAAAKDAAVIAFLQK 329


>ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-2 [Vitis vinifera]
          Length = 510

 Score =  139 bits (350), Expect = 3e-31
 Identities = 80/188 (42%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
 Frame = -1

Query: 531 KYHKRTKE-RAARVDGKTYHFFNQLEAIDSRPSLPPLSFEIQIPNPIPISTTV---LNVT 364
           KYHKRTKE R+ R +GK Y FF QLEA+D+ P +PP       P+P+   T+     ++ 
Sbjct: 109 KYHKRTKEGRSNRQNGKNYRFFEQLEALDNHPLMPP-------PSPVKYETSTPMAASMP 161

Query: 363 PTNPAD----SPQANAYQSCQNIYTSEFISTSLSPRPSLRKKSG---YMKRKWSTFFENL 205
            TNP D    S   NA          + ++ S S   S  K+S      KRKW  FFE L
Sbjct: 162 QTNPIDVTNVSQGINAVPCSIQKPAVDCVAASTSTTSSSGKESEGSRKKKRKWGVFFEKL 221

Query: 204 IEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNREHETLVEERLAATTRNA 25
           ++EV+ KQE  Q +F++ +E+ E + +AREEAWK QE++R+ REHE LV+ER  A  ++A
Sbjct: 222 MKEVIEKQENLQRKFIEAIEKCEQDRIAREEAWKLQELDRIKREHEILVQERSIAAAKDA 281

Query: 24  TVIAFLEK 1
            V+AFL+K
Sbjct: 282 AVLAFLQK 289


>ref|XP_002306695.1| predicted protein [Populus trichocarpa] gi|222856144|gb|EEE93691.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  137 bits (344), Expect = 1e-30
 Identities = 85/218 (38%), Positives = 116/218 (53%), Gaps = 41/218 (18%)
 Frame = -1

Query: 531 KYHKRTKE-RAARVDGKTYHFFNQLEAIDSRP-------SLPPLSFEIQIPNPIPISTTV 376
           KYHKRTK+ R  + +GKTY FF+QLEA +S P       SLPP   +   P    I+  V
Sbjct: 124 KYHKRTKDGRTGKQEGKTYRFFDQLEAFESHPPSLSSPLSLPPQPPKAPTPAVTAIAMPV 183

Query: 375 LNVTP------------------------------TNPADSPQANAYQSCQNIYTSEFIS 286
           +N +P                              TNP + P  N   S  N ++ + IS
Sbjct: 184 VNPSPNIVRASHTIIYLTVPPFPSTNPTILPPSQATNPTNPPHTNTPPSFPN-FSPDLIS 242

Query: 285 TSLSPRPSLR---KKSGYMKRKWSTFFENLIEEVVRKQEIFQNQFLKTLERLEHEHMARE 115
            S S   S     ++    KRKW  FFE L++EV++KQE  Q +FL+ +ER EHE M RE
Sbjct: 243 NSTSSSTSSDVELQERRKRKRKWKDFFERLMKEVIQKQEEMQKKFLEAIERREHERMVRE 302

Query: 114 EAWKTQEMERLNREHETLVEERLAATTRNATVIAFLEK 1
           E+W+ QEM R+NRE E L +ER  A +++A V+AFL+K
Sbjct: 303 ESWRMQEMTRINREREILAQERSVAASKDAAVMAFLQK 340


>ref|XP_002300920.1| predicted protein [Populus trichocarpa] gi|222842646|gb|EEE80193.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  134 bits (337), Expect = 8e-30
 Identities = 90/230 (39%), Positives = 121/230 (52%), Gaps = 53/230 (23%)
 Frame = -1

Query: 531 KYHKRTKE-RAARVDGKTYHFFNQLEAIDSRP---SLPPLSFEIQIPNP----------- 397
           KYHKRTKE R  + +GK+Y FF++LEA  + P   + PP      +P P           
Sbjct: 118 KYHKRTKEGRTGKSEGKSYKFFDELEAFQNHPPHSTQPPTLTPPPLPPPNAQTASATITT 177

Query: 396 ---------------IPISTTVLNV------TPTN-------PADS----PQANAY-QSC 316
                          +P  T  +++      TPTN       P  S    P  NAY  S 
Sbjct: 178 LPWTNNNTAIVSHATVPSRTNPMDIMSQSIATPTNNRAISPMPISSNPINPSQNAYPSSL 237

Query: 315 QNIYTSEFISTSLSPRPSLRK-KSGYMKRK----WSTFFENLIEEVVRKQEIFQNQFLKT 151
           QN+ T    S+S S   S  + +  Y KRK    W  FFE L  +V++KQE  Q +FL+T
Sbjct: 238 QNLTTHLLASSSPSSTASDEELEVSYKKRKRESNWKDFFERLTRDVIKKQEDLQEKFLET 297

Query: 150 LERLEHEHMAREEAWKTQEMERLNREHETLVEERLAATTRNATVIAFLEK 1
           +E+ EHE MAREEAW+ QEM R+NREHETL++ER  A  ++A V+AFL+K
Sbjct: 298 IEKYEHERMAREEAWRMQEMARINREHETLIQERSTAAAKDAAVVAFLQK 347


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