BLASTX nr result
ID: Coptis23_contig00014686
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014686
(507 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22241.3| unnamed protein product [Vitis vinifera] 143 1e-32
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi... 143 1e-32
ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29
ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi... 126 2e-27
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi... 126 2e-27
>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
Length = 1256
Score = 143 bits (361), Expect = 1e-32
Identities = 74/167 (44%), Positives = 102/167 (61%)
Frame = +1
Query: 1 LALTHKWLPCLKDCKALWDCLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSG 180
LA KWL LKDCK L CLCQQ L+EAL+L E+ML H D+ N+F E L G
Sbjct: 679 LARRDKWLLELKDCKVLVGCLCQQKFLKEALELLESMLATYPHLRLDVCNMFLEKLCVVG 738
Query: 181 HAHFAVVFLDEVVRQRELLSDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNIAPCIDVCC 360
A +DE ++Q +L +A+SH++SG CKEK F EAF + ++M KN+ PC+D
Sbjct: 739 FTTIAHALVDEFLQQGCILDHTAHSHLISGFCKEKRFSEAFTIFESMQAKNLVPCLDASI 798
Query: 361 QLIPQLCRLHRWEKAVVLKEIVSKKDPASCLSVYYALICGLYRGGMV 501
LIPQLCR +R EKA+ LK++ ++ SV+ AL+ G + G +
Sbjct: 799 LLIPQLCRANRVEKAIALKDLSLREQSIDSFSVHSALMNGFCKTGRI 845
Score = 59.3 bits (142), Expect = 3e-07
Identities = 38/146 (26%), Positives = 67/146 (45%)
Frame = +1
Query: 64 CQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSGHAHFAVVFLDEVVRQRELLSD 243
C++ EA +FE+M +L D S + L + A+ D +R++ + S
Sbjct: 770 CKEKRFSEAFTIFESMQAKNLVPCLDASILLIPQLCRANRVEKAIALKDLSLREQSIDSF 829
Query: 244 SAYSHIVSGLCKEKGFQEAFDVLDAMLEKNIAPCIDVCCQLIPQLCRLHRWEKAVVLKEI 423
S +S +++G CK EA + M + P I++C L+ C+ + K L +
Sbjct: 830 SVHSALMNGFCKTGRIGEAAILFQDMFSNGLLPDIEICNMLVFGYCQANSVRKVTELIGV 889
Query: 424 VSKKDPASCLSVYYALICGLYRGGMV 501
+ +KD +SVY ++ L GMV
Sbjct: 890 MIRKDLGFSISVYRNVVRLLCMNGMV 915
>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Vitis vinifera]
Length = 1273
Score = 143 bits (361), Expect = 1e-32
Identities = 74/167 (44%), Positives = 102/167 (61%)
Frame = +1
Query: 1 LALTHKWLPCLKDCKALWDCLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSG 180
LA KWL LKDCK L CLCQQ L+EAL+L E+ML H D+ N+F E L G
Sbjct: 696 LARRDKWLLELKDCKVLVGCLCQQKFLKEALELLESMLATYPHLRLDVCNMFLEKLCVVG 755
Query: 181 HAHFAVVFLDEVVRQRELLSDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNIAPCIDVCC 360
A +DE ++Q +L +A+SH++SG CKEK F EAF + ++M KN+ PC+D
Sbjct: 756 FTTIAHALVDEFLQQGCILDHTAHSHLISGFCKEKRFSEAFTIFESMQAKNLVPCLDASI 815
Query: 361 QLIPQLCRLHRWEKAVVLKEIVSKKDPASCLSVYYALICGLYRGGMV 501
LIPQLCR +R EKA+ LK++ ++ SV+ AL+ G + G +
Sbjct: 816 LLIPQLCRANRVEKAIALKDLSLREQSIDSFSVHSALMNGFCKTGRI 862
Score = 59.3 bits (142), Expect = 3e-07
Identities = 38/146 (26%), Positives = 67/146 (45%)
Frame = +1
Query: 64 CQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSGHAHFAVVFLDEVVRQRELLSD 243
C++ EA +FE+M +L D S + L + A+ D +R++ + S
Sbjct: 787 CKEKRFSEAFTIFESMQAKNLVPCLDASILLIPQLCRANRVEKAIALKDLSLREQSIDSF 846
Query: 244 SAYSHIVSGLCKEKGFQEAFDVLDAMLEKNIAPCIDVCCQLIPQLCRLHRWEKAVVLKEI 423
S +S +++G CK EA + M + P I++C L+ C+ + K L +
Sbjct: 847 SVHSALMNGFCKTGRIGEAAILFQDMFSNGLLPDIEICNMLVFGYCQANSVRKVTELIGV 906
Query: 424 VSKKDPASCLSVYYALICGLYRGGMV 501
+ +KD +SVY ++ L GMV
Sbjct: 907 MIRKDLGFSISVYRNVVRLLCMNGMV 932
>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Glycine max]
Length = 1186
Score = 132 bits (331), Expect = 4e-29
Identities = 72/165 (43%), Positives = 105/165 (63%)
Frame = +1
Query: 1 LALTHKWLPCLKDCKALWDCLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSG 180
+A +KWLP L+D K L +C ML+EA Q E ML++ + SDI ++F EVLS +G
Sbjct: 613 VACRNKWLPSLEDFKCLLVHICHWKMLKEASQFLEIMLLSYPYLKSDICHVFLEVLSSTG 672
Query: 181 HAHFAVVFLDEVVRQRELLSDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNIAPCIDVCC 360
A A+V L ++ + L + Y+H++ GLC E F AF VLD ML++++APC+DV
Sbjct: 673 LADTALVVLKQL-QPCFNLDHTDYNHLIRGLCNEGKFSLAFTVLDDMLDRSLAPCLDVSV 731
Query: 361 QLIPQLCRLHRWEKAVVLKEIVSKKDPASCLSVYYALICGLYRGG 495
LIPQLC+ HR++KA+ LK+I+ K+ P+ + ALICG G
Sbjct: 732 LLIPQLCKAHRYDKAIALKDIILKEQPSFSHAADCALICGFCNMG 776
>ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Cucumis sativus]
Length = 1225
Score = 126 bits (317), Expect = 2e-27
Identities = 68/163 (41%), Positives = 97/163 (59%)
Frame = +1
Query: 19 WLPCLKDCKALWDCLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSGHAHFAV 198
W+P L DCK+L CLC++G L+E L E MLV+ HS DI NIF E LS G A
Sbjct: 652 WVPELHDCKSLISCLCKKGKLKEVFSLLETMLVSHTHSRLDILNIFLERLSEVGFATIGQ 711
Query: 199 VFLDEVVRQRELLSDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNIAPCIDVCCQLIPQL 378
V +E++ + AY ++ GLCK AF +LD ++ +++ P IDVC +LIP L
Sbjct: 712 VLAEELMSLGFSVDQKAYELLIIGLCKVNNISIAFSILDDIMGRSMVPSIDVCLRLIPIL 771
Query: 379 CRLHRWEKAVVLKEIVSKKDPASCLSVYYALICGLYRGGMVRQ 507
C++ R+E AV LKE+ + K +S V+ AL+ G + G VR+
Sbjct: 772 CKVGRYETAVALKEMGASKLSSSSHRVFGALMKGFFMMGKVRE 814
>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Cucumis sativus]
Length = 1246
Score = 126 bits (317), Expect = 2e-27
Identities = 68/163 (41%), Positives = 97/163 (59%)
Frame = +1
Query: 19 WLPCLKDCKALWDCLCQQGMLQEALQLFENMLVASLHSFSDISNIFSEVLSGSGHAHFAV 198
W+P L DCK+L CLC++G L+E L E MLV+ HS DI NIF E LS G A
Sbjct: 673 WVPELHDCKSLISCLCKKGKLKEVFSLLETMLVSHTHSRLDILNIFLERLSEVGFATIGQ 732
Query: 199 VFLDEVVRQRELLSDSAYSHIVSGLCKEKGFQEAFDVLDAMLEKNIAPCIDVCCQLIPQL 378
V +E++ + AY ++ GLCK AF +LD ++ +++ P IDVC +LIP L
Sbjct: 733 VLAEELMSLGFSVDQKAYELLIIGLCKVNNISIAFSILDDIMGRSMVPSIDVCLRLIPIL 792
Query: 379 CRLHRWEKAVVLKEIVSKKDPASCLSVYYALICGLYRGGMVRQ 507
C++ R+E AV LKE+ + K +S V+ AL+ G + G VR+
Sbjct: 793 CKVGRYETAVALKEMGASKLSSSSHRVFGALMKGFFMMGKVRE 835