BLASTX nr result

ID: Coptis23_contig00014684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014684
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265574.1| PREDICTED: cell division topological specifi...   299   9e-79
gb|AFC37489.1| MinE protein [Manihot esculenta]                       282   1e-73
ref|XP_002512131.1| conserved hypothetical protein [Ricinus comm...   281   2e-73
emb|CAN67389.1| hypothetical protein VITISV_034714 [Vitis vinifera]   281   3e-73
ref|XP_002278852.2| PREDICTED: cell division topological specifi...   275   1e-71

>ref|XP_002265574.1| PREDICTED: cell division topological specificity factor homolog,
           chloroplastic [Vitis vinifera]
           gi|296088282|emb|CBI36508.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  299 bits (765), Expect = 9e-79
 Identities = 150/228 (65%), Positives = 186/228 (81%)
 Frame = -1

Query: 923 MAISGDLRVCATMASYPTNPVRRYFPPSKVGFNSFQTEGSSVSEVMHKWPRIELDGHSMR 744
           MA+SGDLRV AT++SYPT+P+R     SKVGF       SS+ ++  +WP + L+GH + 
Sbjct: 1   MAVSGDLRVVATLSSYPTHPLRSSLLSSKVGFAGALNGESSIPDITPRWPSLVLNGHPVH 60

Query: 743 CESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRSSN 564
           C S+R   FGI+GDN++S + +++E E LLL+AINM+FLERL+LAWKI+FPP  T R SN
Sbjct: 61  CHSKRI--FGIMGDNKLSPRSISQEAESLLLNAINMNFLERLNLAWKIIFPPQKT-RHSN 117

Query: 563 ARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLGTI 384
           ARIAKQRL+MILFSDRCAVSDEAKQKIV+N+V ALSDFVEIES+DKV LSVSTDP+LGT+
Sbjct: 118 ARIAKQRLQMILFSDRCAVSDEAKQKIVNNIVHALSDFVEIESQDKVQLSVSTDPNLGTV 177

Query: 383 YSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPT 240
           YSVTVPVRRVK +YQ  DE G I N+EYKD GDSSG+VDV+FDF +P+
Sbjct: 178 YSVTVPVRRVKPEYQAVDEMGTIANIEYKDNGDSSGSVDVRFDFVIPS 225


>gb|AFC37489.1| MinE protein [Manihot esculenta]
          Length = 232

 Score =  282 bits (721), Expect = 1e-73
 Identities = 150/231 (64%), Positives = 178/231 (77%), Gaps = 2/231 (0%)
 Frame = -1

Query: 923 MAISGDLRVCATMASYPTNPVRRYFPPS--KVGFNSFQTEGSSVSEVMHKWPRIELDGHS 750
           MAISGDLRV AT+ASY  +P+R   P S  KV F  F   GS  S   HKWP I LD + 
Sbjct: 1   MAISGDLRVSATLASYHKHPLRSSLPTSNSKVEFIGFPGRGSGASPNRHKWPGIMLDRYK 60

Query: 749 MRCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRS 570
           M+  S+R    GI GD Q+S+  + ++ E  LL+AINMSF ERL+LAWKI+FP PA  +S
Sbjct: 61  MQDHSRRF--SGISGDYQLSSTSIRDDAESFLLNAINMSFPERLNLAWKIIFPSPARRKS 118

Query: 569 SNARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLG 390
           SNARIAKQRLKMILFSDRCAVSDEAKQKIV NVV ALS+FVEI+S DKV LSV+ D DLG
Sbjct: 119 SNARIAKQRLKMILFSDRCAVSDEAKQKIVRNVVHALSEFVEIDSEDKVQLSVTADLDLG 178

Query: 389 TIYSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE 237
           T+YSVTVPVRRV+ +YQ  +E+G ITN+EYKDTGD+SG+VDV+FDFF+P E
Sbjct: 179 TVYSVTVPVRRVRPEYQDAEETGSITNIEYKDTGDTSGSVDVRFDFFIPDE 229


>ref|XP_002512131.1| conserved hypothetical protein [Ricinus communis]
           gi|223549311|gb|EEF50800.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 232

 Score =  281 bits (719), Expect = 2e-73
 Identities = 150/234 (64%), Positives = 178/234 (76%), Gaps = 2/234 (0%)
 Frame = -1

Query: 923 MAISGDLRVCATMASYPTNPVRRYFPPS--KVGFNSFQTEGSSVSEVMHKWPRIELDGHS 750
           MAISGDLRV AT+ SY  +P R  FP S  KV F  F   GS  S  +HKWP I +D   
Sbjct: 1   MAISGDLRVSATLTSYHKHPFRSSFPSSNSKVEFTGFPGGGSVTSPNVHKWPSIMVDRCK 60

Query: 749 MRCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRS 570
           M   S+R    GI GD Q+S+  + EE E  LL+AINMSF ERL+LAWKI+FP PA  +S
Sbjct: 61  MHDHSRRF--SGITGDYQLSSTSIGEEAESFLLNAINMSFFERLNLAWKIIFPSPARRKS 118

Query: 569 SNARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLG 390
           SNAR+AKQRLKMILFSDRCAVSDEAK+KIVSN+V ALS+FV IES+DKV LSV+ D DLG
Sbjct: 119 SNARVAKQRLKMILFSDRCAVSDEAKRKIVSNIVHALSEFVVIESQDKVQLSVTADSDLG 178

Query: 389 TIYSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE*SQ 228
           T+YSVTVPVRRV+ +YQ  +E G ITN+EYKDTG+SSG+VDV+FDFF+P E S+
Sbjct: 179 TVYSVTVPVRRVRPEYQDAEEIGSITNIEYKDTGESSGSVDVRFDFFIPDERSR 232


>emb|CAN67389.1| hypothetical protein VITISV_034714 [Vitis vinifera]
          Length = 530

 Score =  281 bits (718), Expect = 3e-73
 Identities = 147/238 (61%), Positives = 181/238 (76%), Gaps = 15/238 (6%)
 Frame = -1

Query: 923 MAISGDLRVCATMASYPTNPVRRYFPPSK---------------VGFNSFQTEGSSVSEV 789
           MA+SGDLRV AT++SYPT+P+R     SK               VGF       SS+ ++
Sbjct: 1   MAVSGDLRVVATLSSYPTHPLRSSLLSSKAKSDKRIIEVDWLVKVGFAGALNGESSIPDI 60

Query: 788 MHKWPRIELDGHSMRCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLA 609
             +WP + L+GH + C S+R   FGI+GDN++S + +++E E LLL+AINM+FLERL+LA
Sbjct: 61  TPRWPSLVLNGHPVHCHSKRI--FGIMGDNKLSPRSISQEAESLLLNAINMNFLERLNLA 118

Query: 608 WKILFPPPATVRSSNARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRD 429
           WKI+FPP  T R SNARIAKQRL+MILFSDRCAVSDEAKQKIV+N+V ALSDFVEIES+D
Sbjct: 119 WKIIFPPQKT-RHSNARIAKQRLQMILFSDRCAVSDEAKQKIVNNIVHALSDFVEIESQD 177

Query: 428 KVHLSVSTDPDLGTIYSVTVPVRRVKSKYQVEDESGMITNVEYKDTGDSSGTVDVKFD 255
           KV LSVSTDP+LGT+YSVTVPVRRVK +YQ  DE G I N+EYKD GDSSG+VDV+ D
Sbjct: 178 KVQLSVSTDPNLGTVYSVTVPVRRVKPEYQAADEMGTIANIEYKDNGDSSGSVDVRLD 235


>ref|XP_002278852.2| PREDICTED: cell division topological specificity factor homolog,
           chloroplastic-like [Vitis vinifera]
           gi|296082964|emb|CBI22265.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  275 bits (704), Expect = 1e-71
 Identities = 144/235 (61%), Positives = 175/235 (74%), Gaps = 3/235 (1%)
 Frame = -1

Query: 923 MAISGDLRVCATMASYP-TNPVRRYFPPSKVGFNSFQTEGSSVSEVMHKWPRIELDGHSM 747
           MAI GDLRV A    +   +P     PPSKV F  F   GS  SE+M KW  +E++ +  
Sbjct: 1   MAICGDLRVSAAPMGFRFKHPFGASLPPSKVRFKHFTNGGSDSSEIMPKWSCMEMERYKT 60

Query: 746 RCESQRSWSFGIIGDNQISAKPVNEETEGLLLSAINMSFLERLDLAWKILFPPPATVRSS 567
            C   +   FG+ G N++  +P+ ++ EG L    +MSF ERL+LAWKILFP P T R+S
Sbjct: 61  WCHYNQP--FGVTGANRLPMEPITQDAEGFLHKMTSMSFFERLNLAWKILFPSPTTRRNS 118

Query: 566 NARIAKQRLKMILFSDRCAVSDEAKQKIVSNVVGALSDFVEIESRDKVHLSVSTDPDLGT 387
           NARIAKQRLKMILFSDRC VSD+AKQKIVSN+VGALS+FVEI+S+DKVHL+VSTDPDLGT
Sbjct: 119 NARIAKQRLKMILFSDRCVVSDDAKQKIVSNIVGALSEFVEIDSQDKVHLNVSTDPDLGT 178

Query: 386 IYSVTVPVRRVKSKYQ--VEDESGMITNVEYKDTGDSSGTVDVKFDFFVPTE*SQ 228
           +YS+TVPVRRVKSKYQ   EDE  +ITN+EYKDTG+ S +VDV+FDFFVP E SQ
Sbjct: 179 VYSITVPVRRVKSKYQDEDEDEDRIITNIEYKDTGERSDSVDVRFDFFVPNENSQ 233


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