BLASTX nr result

ID: Coptis23_contig00014675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014675
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACK44526.1| AT5G09995-like protein [Arabidopsis arenosa]           147   1e-33
ref|NP_974759.1| uncharacterized protein [Arabidopsis thaliana] ...   145   4e-33
ref|NP_974760.1| uncharacterized protein [Arabidopsis thaliana] ...   145   4e-33
ref|NP_568225.1| uncharacterized protein [Arabidopsis thaliana] ...   145   4e-33
gb|AAM62717.1| unknown [Arabidopsis thaliana]                         145   4e-33

>gb|ACK44526.1| AT5G09995-like protein [Arabidopsis arenosa]
          Length = 256

 Score =  147 bits (370), Expect = 1e-33
 Identities = 74/97 (76%), Positives = 81/97 (83%)
 Frame = -3

Query: 293 SDAPLLTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAAL 114
           S +P LT+SVG PP  LSQW  T +H  LLN VAC+ AIS SWLFF+AIP LLAF+KAA 
Sbjct: 70  SISPQLTSSVGQPPLQLSQWTFTQKHFILLNVVACITAISASWLFFAAIPTLLAFKKAAE 129

Query: 113 SLEKLMDVMREELPDTMAAVRLSGMEISDLTMELSDL 3
           SLEKL+DV REELPDTMAAVRLSGMEISDLTMELSDL
Sbjct: 130 SLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDL 166


>ref|NP_974759.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332004094|gb|AED91477.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 257

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/92 (79%), Positives = 78/92 (84%)
 Frame = -3

Query: 278 LTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKL 99
           LT+SVG PP  LSQW  T +H  LLN VACV AIS SWLFF+AIP LLAF+KAA SLEKL
Sbjct: 75  LTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLEKL 134

Query: 98  MDVMREELPDTMAAVRLSGMEISDLTMELSDL 3
           +DV REELPDTMAAVRLSGMEISDLTMELSDL
Sbjct: 135 LDVTREELPDTMAAVRLSGMEISDLTMELSDL 166


>ref|NP_974760.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332004095|gb|AED91478.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 256

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/92 (79%), Positives = 78/92 (84%)
 Frame = -3

Query: 278 LTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKL 99
           LT+SVG PP  LSQW  T +H  LLN VACV AIS SWLFF+AIP LLAF+KAA SLEKL
Sbjct: 75  LTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLEKL 134

Query: 98  MDVMREELPDTMAAVRLSGMEISDLTMELSDL 3
           +DV REELPDTMAAVRLSGMEISDLTMELSDL
Sbjct: 135 LDVTREELPDTMAAVRLSGMEISDLTMELSDL 166


>ref|NP_568225.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26453006|dbj|BAC43579.1| unknown protein [Arabidopsis
           thaliana] gi|28973017|gb|AAO63833.1| unknown protein
           [Arabidopsis thaliana] gi|332004096|gb|AED91479.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 205

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/92 (79%), Positives = 78/92 (84%)
 Frame = -3

Query: 278 LTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKL 99
           LT+SVG PP  LSQW  T +H  LLN VACV AIS SWLFF+AIP LLAF+KAA SLEKL
Sbjct: 75  LTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLEKL 134

Query: 98  MDVMREELPDTMAAVRLSGMEISDLTMELSDL 3
           +DV REELPDTMAAVRLSGMEISDLTMELSDL
Sbjct: 135 LDVTREELPDTMAAVRLSGMEISDLTMELSDL 166


>gb|AAM62717.1| unknown [Arabidopsis thaliana]
          Length = 205

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/92 (79%), Positives = 78/92 (84%)
 Frame = -3

Query: 278 LTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKL 99
           LT+SVG PP  LSQW  T +H  LLN VACV AIS SWLFF+AIP LLAF+KAA SLEKL
Sbjct: 75  LTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLEKL 134

Query: 98  MDVMREELPDTMAAVRLSGMEISDLTMELSDL 3
           +DV REELPDTMAAVRLSGMEISDLTMELSDL
Sbjct: 135 LDVTREELPDTMAAVRLSGMEISDLTMELSDL 166


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