BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014673
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515369.1| DNA binding protein, putative [Ricinus commu...    91   7e-17
ref|NP_194897.1| B3 domain-containing protein REM9 [Arabidopsis ...    88   6e-16
emb|CAD29662.1| putative auxin response factor 23 [Arabidopsis t...    88   6e-16
ref|XP_002863108.1| predicted protein [Arabidopsis lyrata subsp....    86   2e-15
ref|XP_002893387.1| T24P13.6 [Arabidopsis lyrata subsp. lyrata] ...    86   4e-15

>ref|XP_002515369.1| DNA binding protein, putative [Ricinus communis]
           gi|223545313|gb|EEF46818.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 368

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/108 (43%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
 Frame = -3

Query: 320 EISIPPAFKSRHLKENCSEGNVTLRTNRSSKCWAVSMKGFWFREGWEDFARAHDLCIGDF 141
           E SIP +F  +HLK N  E  + +  + + K W V + G  F +GW+DFA+ HDL IGDF
Sbjct: 19  EPSIPVSF-FKHLKGNRRE--IAVLRSTAGKLWHVKINGRRFEDGWKDFAKYHDLHIGDF 75

Query: 140 LVFKHEGGLKFHVCIFDPAACEKEYPLLDV---VGSDDEKMEKVQTKE 6
           LVF+HEG + F+V +FDP+ACE+EY   +V   + + +E+ E  +T +
Sbjct: 76  LVFRHEGDMVFYVMVFDPSACEREYTSFNVKEEMETSEEEKEPAKTSD 123


>ref|NP_194897.1| B3 domain-containing protein REM9 [Arabidopsis thaliana]
           gi|75318792|sp|O81778.1|REM9_ARATH RecName: Full=B3
           domain-containing protein REM9; AltName: Full=Auxin
           response factor 23; AltName: Full=Protein REPRODUCTIVE
           MERISTEM 9 gi|3281859|emb|CAA19754.1| putative protein
           [Arabidopsis thaliana] gi|7270072|emb|CAB79887.1|
           putative protein [Arabidopsis thaliana]
           gi|332660545|gb|AEE85945.1| B3 domain-containing protein
           REM9 [Arabidopsis thaliana]
          Length = 461

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/85 (45%), Positives = 53/85 (62%)
 Frame = -3

Query: 317 ISIPPAFKSRHLKENCSEGNVTLRTNRSSKCWAVSMKGFWFREGWEDFARAHDLCIGDFL 138
           + IP  + S H++       VTLRT+ S + W V M+G    EGW++F  AHDL IGDF+
Sbjct: 26  LKIPVNYFSEHIEGKHEGKTVTLRTDASERTWEVKMEGHRLTEGWKEFVEAHDLRIGDFV 85

Query: 137 VFKHEGGLKFHVCIFDPAACEKEYP 63
           VF+HEG + FHV    P+ CE +YP
Sbjct: 86  VFRHEGDMVFHVTALGPSCCEIQYP 110


>emb|CAD29662.1| putative auxin response factor 23 [Arabidopsis thaliana]
          Length = 275

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/85 (45%), Positives = 53/85 (62%)
 Frame = -3

Query: 317 ISIPPAFKSRHLKENCSEGNVTLRTNRSSKCWAVSMKGFWFREGWEDFARAHDLCIGDFL 138
           + IP  + S H++       VTLRT+ S + W V M+G    EGW++F  AHDL IGDF+
Sbjct: 26  LKIPVNYFSEHIEGKHEGKTVTLRTDASERTWEVKMEGHRLTEGWKEFVEAHDLRIGDFV 85

Query: 137 VFKHEGGLKFHVCIFDPAACEKEYP 63
           VF+HEG + FHV    P+ CE +YP
Sbjct: 86  VFRHEGDMVFHVTALGPSCCEIQYP 110


>ref|XP_002863108.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308930|gb|EFH39367.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 142

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
 Frame = -3

Query: 326 LKEISIPPAFKSRHLK-ENCSEGNVTLRTNRSSKCWAVSMKGFWFREGWEDFARAHDLCI 150
           + E +IP AF S+H++ +N     V LR++ S K W V M G    +GWEDFA +HDL I
Sbjct: 37  ISEHNIPVAFFSKHVEGKNDQNKTVNLRSDASEKTWLVKMDGLNLTDGWEDFAFSHDLRI 96

Query: 149 GDFLVFKHEGGLKFHVCIFDPAACEKEYPLLDVVGSDDEKMEK 21
           GD +VF+HEG + FHV    P+ CE +Y       +DD++ ++
Sbjct: 97  GDIVVFRHEGEMVFHVTALGPSCCEIQYYTSSHNINDDDRNDQ 139


>ref|XP_002893387.1| T24P13.6 [Arabidopsis lyrata subsp. lyrata]
           gi|297339229|gb|EFH69646.1| T24P13.6 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1003

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = -3

Query: 317 ISIPPAFKSRHLKENCSEGNVT-LRTNRSSKCWAVSMKGFWFREGWEDFARAHDLCIGDF 141
           ++IP AF S+H++    +  +  LR++ S K W V M G    +GWEDFA AHDL IGD 
Sbjct: 27  LNIPVAFFSKHVEGKNDQNKIAKLRSDASEKTWLVKMDGLNLTDGWEDFAFAHDLRIGDI 86

Query: 140 LVFKHEGGLKFHVCIFDPAACEKEYPLLDVVGSDDEKMEK 21
           ++F+HEG + FHV    P+ CE +Y       +DD++ ++
Sbjct: 87  VIFRHEGEMVFHVTALGPSCCEIQYYTSSHNSNDDDRNDQ 126