BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014672
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   230   1e-58
emb|CBI19367.3| unnamed protein product [Vitis vinifera]              230   1e-58
gb|EEE54732.1| hypothetical protein OsJ_02081 [Oryza sativa Japo...   227   9e-58
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...   225   3e-57
ref|XP_003563698.1| PREDICTED: pre-mRNA-processing factor 40 hom...   217   7e-55

>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score =  230 bits (586), Expect = 1e-58
 Identities = 111/151 (73%), Positives = 131/151 (86%)
 Frame = +3

Query: 36  NGVSLQDLEEVKKSMAVAGKVNVTALEEKAVEAEPLTYATKQEAKDAFKALLESANVESD 215
           NG S+QD+EE KK +AVAGK+NVT LEEK ++ EPL Y+TK EAK+AFKALLESANVESD
Sbjct: 420 NGASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKALLESANVESD 479

Query: 216 WNWEQAMRVIINDKRYGALRTLGERKQTFTEYLGQRKKQEAEDRRIKQKKAREDFTKMLE 395
           W W+QAM+ IINDKRYGAL+TLGERKQ F EYLGQRKK EAE+RR++QKKARE+FT MLE
Sbjct: 480 WTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKKAREEFTTMLE 539

Query: 396 ESSVLTANIKWSKAIAIFEDDERFNAVERVR 488
           E   LT++IKWSKA+ +F+DDERF AVER R
Sbjct: 540 ECKELTSSIKWSKAVDMFQDDERFKAVERSR 570



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/124 (25%), Positives = 62/124 (50%)
 Frame = +3

Query: 114 EEKAVEAEPLTYATKQEAKDAFKALLESANVESDWNWEQAMRVIINDKRYGALRTLGERK 293
           + K +EAE      K+  ++    L E   + S   W +A+ +  +D+R+ A+    +R+
Sbjct: 514 QRKKIEAEERRMRQKKAREEFTTMLEECKELTSSIKWSKAVDMFQDDERFKAVERSRDRE 573

Query: 294 QTFTEYLGQRKKQEAEDRRIKQKKAREDFTKMLEESSVLTANIKWSKAIAIFEDDERFNA 473
             F  ++ + +K+E      +QK+ R ++ + LE    +  N +W K     EDDER + 
Sbjct: 574 DLFENFIMELQKKERTKALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSR 633

Query: 474 VERV 485
           +E++
Sbjct: 634 LEKI 637


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  230 bits (586), Expect = 1e-58
 Identities = 111/151 (73%), Positives = 131/151 (86%)
 Frame = +3

Query: 36  NGVSLQDLEEVKKSMAVAGKVNVTALEEKAVEAEPLTYATKQEAKDAFKALLESANVESD 215
           NG S+QD+EE KK +AVAGK+NVT LEEK ++ EPL Y+TK EAK+AFKALLESANVESD
Sbjct: 430 NGASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKALLESANVESD 489

Query: 216 WNWEQAMRVIINDKRYGALRTLGERKQTFTEYLGQRKKQEAEDRRIKQKKAREDFTKMLE 395
           W W+QAM+ IINDKRYGAL+TLGERKQ F EYLGQRKK EAE+RR++QKKARE+FT MLE
Sbjct: 490 WTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKKAREEFTTMLE 549

Query: 396 ESSVLTANIKWSKAIAIFEDDERFNAVERVR 488
           E   LT++IKWSKA+ +F+DDERF AVER R
Sbjct: 550 ECKELTSSIKWSKAVDMFQDDERFKAVERSR 580



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/124 (25%), Positives = 62/124 (50%)
 Frame = +3

Query: 114 EEKAVEAEPLTYATKQEAKDAFKALLESANVESDWNWEQAMRVIINDKRYGALRTLGERK 293
           + K +EAE      K+  ++    L E   + S   W +A+ +  +D+R+ A+    +R+
Sbjct: 524 QRKKIEAEERRMRQKKAREEFTTMLEECKELTSSIKWSKAVDMFQDDERFKAVERSRDRE 583

Query: 294 QTFTEYLGQRKKQEAEDRRIKQKKAREDFTKMLEESSVLTANIKWSKAIAIFEDDERFNA 473
             F  ++ + +K+E      +QK+ R ++ + LE    +  N +W K     EDDER + 
Sbjct: 584 DLFENFIMELQKKERTKALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSR 643

Query: 474 VERV 485
           +E++
Sbjct: 644 LEKI 647


>gb|EEE54732.1| hypothetical protein OsJ_02081 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  227 bits (578), Expect = 9e-58
 Identities = 112/160 (70%), Positives = 132/160 (82%)
 Frame = +3

Query: 9   SLQEAEKSGNGVSLQDLEEVKKSMAVAGKVNVTALEEKAVEAEPLTYATKQEAKDAFKAL 188
           SL     + NG S ++LEE KK+MAV GK+NVT +E+K  E EP+TYA K EAK+AFKAL
Sbjct: 387 SLASTADTQNGASAEELEEAKKTMAVPGKINVTPVEDKTSEEEPVTYANKLEAKNAFKAL 446

Query: 189 LESANVESDWNWEQAMRVIINDKRYGALRTLGERKQTFTEYLGQRKKQEAEDRRIKQKKA 368
           LES+NVESDW W+QAMRVIINDKRYGAL+TLGERKQ F EYL QRKK EAE+RRIKQ+KA
Sbjct: 447 LESSNVESDWTWDQAMRVIINDKRYGALKTLGERKQAFNEYLNQRKKLEAEERRIKQRKA 506

Query: 369 REDFTKMLEESSVLTANIKWSKAIAIFEDDERFNAVERVR 488
           R+DF  MLEES  LT++ +WSKAI +FEDDERF+AVER R
Sbjct: 507 RDDFLAMLEESKELTSSTRWSKAITMFEDDERFSAVERPR 546



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
 Frame = +3

Query: 114 EEKAVEAEPLTYATKQEAKDAFKALLE-SANVESDWNWEQAMRVIINDKRYGALRTLGER 290
           + K +EAE      +++A+D F A+LE S  + S   W +A+ +  +D+R+ A+    ER
Sbjct: 490 QRKKLEAEERRIK-QRKARDDFLAMLEESKELTSSTRWSKAITMFEDDERFSAVERPRER 548

Query: 291 KQTFTEYLGQRKKQEAEDRRIKQKKAREDFTKMLEESSVLTANIKWSKAIAIFEDDERFN 470
           +  F  YL + +K+E      + K+   ++   LE    +  + +W K     EDDER +
Sbjct: 549 EDLFESYLMELQKKERARAAEEHKRHIAEYRAFLESCEFIKTSTQWRKVQERLEDDERCS 608

Query: 471 AVERV 485
            +E++
Sbjct: 609 RLEKI 613


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score =  225 bits (574), Expect = 3e-57
 Identities = 109/158 (68%), Positives = 133/158 (84%)
 Frame = +3

Query: 15  QEAEKSGNGVSLQDLEEVKKSMAVAGKVNVTALEEKAVEAEPLTYATKQEAKDAFKALLE 194
           Q+ + + +G S +D+EE +K MAVAGKVN T LEEK+ + EPL +A KQEAK+AFKALLE
Sbjct: 383 QDVKNTVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLVFANKQEAKNAFKALLE 442

Query: 195 SANVESDWNWEQAMRVIINDKRYGALRTLGERKQTFTEYLGQRKKQEAEDRRIKQKKARE 374
           S NV+SDW WEQAMR IINDKRYGAL+TLGERKQ F EYLG RKK +AE+RRI+QKKARE
Sbjct: 443 SVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKARE 502

Query: 375 DFTKMLEESSVLTANIKWSKAIAIFEDDERFNAVERVR 488
           +FTKMLEES  LT++ +WSKA+++FE+DERF AVER R
Sbjct: 503 EFTKMLEESKELTSSTRWSKAVSMFENDERFKAVERSR 540



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/122 (27%), Positives = 62/122 (50%)
 Frame = +3

Query: 120 KAVEAEPLTYATKQEAKDAFKALLESANVESDWNWEQAMRVIINDKRYGALRTLGERKQT 299
           K ++AE      K+  ++  K L ES  + S   W +A+ +  ND+R+ A+    +R+  
Sbjct: 486 KKLDAEERRIRQKKAREEFTKMLEESKELTSSTRWSKAVSMFENDERFKAVERSRDREDL 545

Query: 300 FTEYLGQRKKQEAEDRRIKQKKAREDFTKMLEESSVLTANIKWSKAIAIFEDDERFNAVE 479
           F  Y+ + +++E E    + KK   ++ K LE    +  + +W K     EDDER + +E
Sbjct: 546 FESYIVELERKEKERAAEEHKKNIAEYRKFLESCDYIKVSSQWRKVQDRLEDDERCSRLE 605

Query: 480 RV 485
           ++
Sbjct: 606 KL 607


>ref|XP_003563698.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like
           [Brachypodium distachyon]
          Length = 998

 Score =  217 bits (553), Expect = 7e-55
 Identities = 107/151 (70%), Positives = 125/151 (82%)
 Frame = +3

Query: 36  NGVSLQDLEEVKKSMAVAGKVNVTALEEKAVEAEPLTYATKQEAKDAFKALLESANVESD 215
           +G S +DLEE KK+M  AGK+NVT LEEK  E EP  YA K EAK+AFKALLESANVESD
Sbjct: 390 DGASAEDLEEAKKTMPTAGKINVTPLEEKTSEEEPPVYANKLEAKNAFKALLESANVESD 449

Query: 216 WNWEQAMRVIINDKRYGALRTLGERKQTFTEYLGQRKKQEAEDRRIKQKKAREDFTKMLE 395
           W+W+QAMRVIINDKRYGALR+ GERKQ + EYL QRKK EAE+RR+KQ+K+R+DF  MLE
Sbjct: 450 WSWDQAMRVIINDKRYGALRSHGERKQVYNEYLNQRKKIEAEERRVKQRKSRDDFLTMLE 509

Query: 396 ESSVLTANIKWSKAIAIFEDDERFNAVERVR 488
           E   LT++ +WSKAI +FEDDERFNAVER R
Sbjct: 510 ECKDLTSSTRWSKAITMFEDDERFNAVERPR 540



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/124 (25%), Positives = 60/124 (48%)
 Frame = +3

Query: 114 EEKAVEAEPLTYATKQEAKDAFKALLESANVESDWNWEQAMRVIINDKRYGALRTLGERK 293
           + K +EAE      ++   D    L E  ++ S   W +A+ +  +D+R+ A+    ER+
Sbjct: 484 QRKKIEAEERRVKQRKSRDDFLTMLEECKDLTSSTRWSKAITMFEDDERFNAVERPRERE 543

Query: 294 QTFTEYLGQRKKQEAEDRRIKQKKAREDFTKMLEESSVLTANIKWSKAIAIFEDDERFNA 473
             F  YL + +K+E      + K+   ++   LE    + A+ +W K     EDDER + 
Sbjct: 544 DLFENYLVELQKKEKAKAAEEHKRHVAEYRAFLESCDFIKASTQWRKVQDRLEDDERCSR 603

Query: 474 VERV 485
           +E++
Sbjct: 604 LEKI 607