BLASTX nr result

ID: Coptis23_contig00014664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014664
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95981.1| unknown [Populus trichocarpa]                          355   1e-95
ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|2...   349   9e-94
ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|2...   341   2e-91
ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis ...   340   4e-91
ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] ...   334   3e-89

>gb|ABK95981.1| unknown [Populus trichocarpa]
          Length = 243

 Score =  355 bits (911), Expect = 1e-95
 Identities = 155/237 (65%), Positives = 184/237 (77%)
 Frame = +2

Query: 194 SSMELTGAGDFEHINRDRRMHHELWPLNAVDSKKACFPCCLVWTPLPVVSWLAPFIGHVG 373
           S+M+L GA D EH++   R+ HELWPL+ +D KKA FPCCL+WTPLPVVSWLAPFIGHVG
Sbjct: 7   SAMDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVG 66

Query: 374 ICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGA 553
           ICREDGTILDF+GSNFV+V+DF+FGA ARY  LDREQCCF PNL+GHTCKH YKH E+G 
Sbjct: 67  ICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQCCFPPNLTGHTCKHGYKHSEYGT 126

Query: 554 AMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGH 733
           A++WDDAL  SMRHF+HK+YNLFTCNCHS+VANCLNRLCYGG++ WNM++VA LIL KGH
Sbjct: 127 AITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVLILFKGH 186

Query: 734 WVDSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 904
           W+D  S+VRSF PF   LC+G+ +V                      TYC K LL+C
Sbjct: 187 WIDWKSIVRSFLPFAVALCIGVCLVGWPFLVGLFSFSLLLMGWFLLGTYCFKSLLEC 243


>ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|222866198|gb|EEF03329.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  349 bits (895), Expect = 9e-94
 Identities = 155/239 (64%), Positives = 183/239 (76%), Gaps = 4/239 (1%)
 Frame = +2

Query: 200 MELTGAGDFEHINRDRRMHHELWPLNAVDSKKACFPCCLVWTPLPVVSWLAPFIGHVGIC 379
           M+L GA D EH++   R+ HELWPL+ +D KKA FPCCL+WTPLPVVSWLAPFIGHVGIC
Sbjct: 1   MDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60

Query: 380 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ----CCFSPNLSGHTCKHAYKHMEH 547
           REDGTILDF+GSNFV+V+DF+FGA ARY  LDREQ    CCF PNL+GHTCKH YKH E+
Sbjct: 61  REDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQGTGQCCFPPNLTGHTCKHGYKHSEY 120

Query: 548 GAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSK 727
           G A++WDDAL  SMRHF+HK+YNLFTCNCHS+VANCLNRLCYGG++ WNM++VA LIL K
Sbjct: 121 GTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVLILFK 180

Query: 728 GHWVDSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 904
           GHW+D  S+VRSF PF  VLC+G+ +V                      TYC K LL+C
Sbjct: 181 GHWIDWKSIVRSFLPFAVVLCIGVCLVGWPFLVGLFSFSLLLMGWFLLGTYCFKSLLEC 239


>ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|222854541|gb|EEE92088.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  341 bits (875), Expect = 2e-91
 Identities = 150/235 (63%), Positives = 179/235 (76%)
 Frame = +2

Query: 200 MELTGAGDFEHINRDRRMHHELWPLNAVDSKKACFPCCLVWTPLPVVSWLAPFIGHVGIC 379
           M+L GA D EH++   R+ H+LWPL+ +D KKA FPCCL+WTPLPVVSWLAPFIGHVGIC
Sbjct: 1   MDLKGAFDVEHMSSTSRIQHDLWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60

Query: 380 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGAAM 559
           REDGTILDF+GSN V+V+DF FGA ARYL LDREQCCF PNL+GHTCKH YKH E+G A+
Sbjct: 61  REDGTILDFSGSNSVNVDDFTFGAAARYLQLDREQCCFPPNLAGHTCKHGYKHSEYGTAI 120

Query: 560 SWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGHWV 739
           +WDDAL  S R FEHK+YNLFTCNCHS+VA+CLNR CYGG++ WN+++VA LIL KGHW+
Sbjct: 121 TWDDALQSSTRSFEHKTYNLFTCNCHSFVAHCLNRFCYGGSMDWNLIDVAVLILFKGHWI 180

Query: 740 DSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 904
           D  S+++SF PF  VLCLGI +V                      TYC K LL+C
Sbjct: 181 DWKSIIKSFLPFTIVLCLGIVLVGWPFLVGLFSFTLLLMGWFLLGTYCFKSLLEC 235


>ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis vinifera]
           gi|296081665|emb|CBI20670.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  340 bits (872), Expect = 4e-91
 Identities = 156/235 (66%), Positives = 176/235 (74%)
 Frame = +2

Query: 200 MELTGAGDFEHINRDRRMHHELWPLNAVDSKKACFPCCLVWTPLPVVSWLAPFIGHVGIC 379
           MEL    D E ++  RR  HELWPL+ +D KKA  PCCLVWTPLPVVSWLAPFIGHVGIC
Sbjct: 9   MELNAINDVEDMSTARRTQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAPFIGHVGIC 68

Query: 380 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGAAM 559
           REDG ILDFAGSNFV+VNDFAFGAVARYL LDRE+CCF PNL+GHTCK+ YKH E+G A+
Sbjct: 69  REDGAILDFAGSNFVNVNDFAFGAVARYLQLDREKCCFPPNLAGHTCKNGYKHAENGTAV 128

Query: 560 SWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGHWV 739
           +WDDAL  S  HF HKSYNLFTCNCHS+VANCLNRL YGG++ WNM+NV ALIL KG WV
Sbjct: 129 TWDDALLSSSHHFGHKSYNLFTCNCHSFVANCLNRLAYGGSMGWNMINVCALILFKGRWV 188

Query: 740 DSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 904
           DSMS+ RSF PF+ VLCLG+ M                       TYC K +L+C
Sbjct: 189 DSMSIFRSFSPFMLVLCLGVFMAGWPFLIGLLSFSLLLIGWFLLGTYCFKNVLEC 243


>ref|XP_003589015.1| Transmembrane protein [Medicago truncatula]
           gi|217072464|gb|ACJ84592.1| unknown [Medicago
           truncatula] gi|355478063|gb|AES59266.1| Transmembrane
           protein [Medicago truncatula]
           gi|388520819|gb|AFK48471.1| unknown [Medicago
           truncatula]
          Length = 236

 Score =  334 bits (856), Expect = 3e-89
 Identities = 151/235 (64%), Positives = 175/235 (74%)
 Frame = +2

Query: 200 MELTGAGDFEHINRDRRMHHELWPLNAVDSKKACFPCCLVWTPLPVVSWLAPFIGHVGIC 379
           MEL  + D E +   ++M H+LWPL+ +D K A FPCCLVW PLPVVSWLAPFIGHVGIC
Sbjct: 2   MELNASYDIEQLRPKKKMEHDLWPLDPIDPKNAKFPCCLVWNPLPVVSWLAPFIGHVGIC 61

Query: 380 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGAAM 559
           REDGT+LDF+GS  V+V+DFAFG VARYL+LDR QCCF PNLSGHTCKH Y+H E+G A+
Sbjct: 62  REDGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQCCFPPNLSGHTCKHGYRHTEYGTAI 121

Query: 560 SWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGHWV 739
           +WDDAL  S+RHFE K+YNLFTCNCHS+VAN LNRLCYGG++ WNMVNV  LIL KGHWV
Sbjct: 122 TWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNRLCYGGSMSWNMVNVGILILFKGHWV 181

Query: 740 DSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 904
           D  SVVRSF PFV V+C+GI MV                      TY  K LL+C
Sbjct: 182 DFWSVVRSFLPFVVVVCVGIFMVGWPFLLGLLSFSLLLIGWFLLGTYLVKSLLEC 236


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