BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014656
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containi...   330   6e-88
emb|CBI16904.3| unnamed protein product [Vitis vinifera]              330   6e-88
emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]   328   2e-87
ref|XP_002533488.1| pentatricopeptide repeat-containing protein,...   318   2e-84
ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|2...   307   4e-81

>ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein At3g02330-like
            [Vitis vinifera]
          Length = 877

 Score =  330 bits (845), Expect = 6e-88
 Identities = 153/217 (70%), Positives = 189/217 (87%)
 Frame = -3

Query: 1210 MISGYSQHGLGMEALQIFSKMQSENINPNHATFVAVLRACGYMGLFEEGKCYFHSMLNDY 1031
            M+ GY+QHGLG EAL+IF  MQ EN+ PNHATF+AVLRACG+MGL E+G  YFHSML++Y
Sbjct: 650  MVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNY 709

Query: 1030 GLQPQLEHYSCMVDIIGRSGQINEALKLILEMPFEADAIVWRSLLSVCRINGDVEVAELA 851
            GL PQLEHYSC+VDI+GRSGQ+++AL+LI  MPFEADA++WR+LLS+C+I+G+VEVAE A
Sbjct: 710  GLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKA 769

Query: 850  ASSILQLDPQDSAAYVLLSNVYAEAGMWGQVSKMRQMMRQNGLKKEPGCSWIEVKSEVNT 671
            A SILQL+P+DSAAYVLLSN+YA AGMW +V+K+R+MMR NGLKKEPGCSWIE+KSEV+ 
Sbjct: 770  AYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHA 829

Query: 670  FLVGDKVHSKSEAIYEMLEDLIGEMKWAGYVPDMDAV 560
            FLVGDK H +S+ IYE L+ L  EMKW GY+PD D +
Sbjct: 830  FLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFI 866


>emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  330 bits (845), Expect = 6e-88
 Identities = 153/217 (70%), Positives = 189/217 (87%)
 Frame = -3

Query: 1210 MISGYSQHGLGMEALQIFSKMQSENINPNHATFVAVLRACGYMGLFEEGKCYFHSMLNDY 1031
            M+ GY+QHGLG EAL+IF  MQ EN+ PNHATF+AVLRACG+MGL E+G  YFHSML++Y
Sbjct: 603  MVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNY 662

Query: 1030 GLQPQLEHYSCMVDIIGRSGQINEALKLILEMPFEADAIVWRSLLSVCRINGDVEVAELA 851
            GL PQLEHYSC+VDI+GRSGQ+++AL+LI  MPFEADA++WR+LLS+C+I+G+VEVAE A
Sbjct: 663  GLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKA 722

Query: 850  ASSILQLDPQDSAAYVLLSNVYAEAGMWGQVSKMRQMMRQNGLKKEPGCSWIEVKSEVNT 671
            A SILQL+P+DSAAYVLLSN+YA AGMW +V+K+R+MMR NGLKKEPGCSWIE+KSEV+ 
Sbjct: 723  AYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHA 782

Query: 670  FLVGDKVHSKSEAIYEMLEDLIGEMKWAGYVPDMDAV 560
            FLVGDK H +S+ IYE L+ L  EMKW GY+PD D +
Sbjct: 783  FLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFI 819


>emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  328 bits (841), Expect = 2e-87
 Identities = 153/217 (70%), Positives = 188/217 (86%)
 Frame = -3

Query: 1210 MISGYSQHGLGMEALQIFSKMQSENINPNHATFVAVLRACGYMGLFEEGKCYFHSMLNDY 1031
            M+ GY+QHGLG EAL+IF  MQ EN+ PNHATF+AVLRACG+MGL E+G  YFHSML++Y
Sbjct: 587  MVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNY 646

Query: 1030 GLQPQLEHYSCMVDIIGRSGQINEALKLILEMPFEADAIVWRSLLSVCRINGDVEVAELA 851
            GL PQLEHYSC+VDI+GRSGQ+++AL+LI  MPFEADA++WR+LLS C+I+G+VEVAE A
Sbjct: 647  GLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKA 706

Query: 850  ASSILQLDPQDSAAYVLLSNVYAEAGMWGQVSKMRQMMRQNGLKKEPGCSWIEVKSEVNT 671
            A SILQL+P+DSAAYVLLSN+YA AGMW +V+K+R+MMR NGLKKEPGCSWIE+KSEV+ 
Sbjct: 707  AYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHA 766

Query: 670  FLVGDKVHSKSEAIYEMLEDLIGEMKWAGYVPDMDAV 560
            FLVGDK H +S+ IYE L+ L  EMKW GY+PD D +
Sbjct: 767  FLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFI 803


>ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526650|gb|EEF28892.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 939

 Score =  318 bits (814), Expect = 2e-84
 Identities = 142/215 (66%), Positives = 186/215 (86%)
 Frame = -3

Query: 1210 MISGYSQHGLGMEALQIFSKMQSENINPNHATFVAVLRACGYMGLFEEGKCYFHSMLNDY 1031
            MI GY+QHGLG EAL  F +MQ EN+ PNHATFV++LRAC +MG  ++G  YF++ML +Y
Sbjct: 652  MICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEY 711

Query: 1030 GLQPQLEHYSCMVDIIGRSGQINEALKLILEMPFEADAIVWRSLLSVCRINGDVEVAELA 851
            GL+PQ+EHYSCM+DIIGRSG+I+EALKLI EMPFEADA++WR+LLS+C+I+G++E+AE A
Sbjct: 712  GLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKA 771

Query: 850  ASSILQLDPQDSAAYVLLSNVYAEAGMWGQVSKMRQMMRQNGLKKEPGCSWIEVKSEVNT 671
             ++ILQL+P+DS+A +LLSN+YA+AGMWG+VS+MR+MMR N LKKEPGCSWIEVK EV+ 
Sbjct: 772  TNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHA 831

Query: 670  FLVGDKVHSKSEAIYEMLEDLIGEMKWAGYVPDMD 566
            FLVG+K H + E IY++L  L+ EMKW GY+PD+D
Sbjct: 832  FLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDID 866


>ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|222873711|gb|EEF10842.1|
            predicted protein [Populus trichocarpa]
          Length = 897

 Score =  307 bits (786), Expect = 4e-81
 Identities = 144/217 (66%), Positives = 179/217 (82%)
 Frame = -3

Query: 1210 MISGYSQHGLGMEALQIFSKMQSENINPNHATFVAVLRACGYMGLFEEGKCYFHSMLNDY 1031
            M+ GY+ HGLG EAL++F  MQ  N+ PNHATFV+VLRAC +MGL ++G  YF  ML++Y
Sbjct: 657  MLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEY 716

Query: 1030 GLQPQLEHYSCMVDIIGRSGQINEALKLILEMPFEADAIVWRSLLSVCRINGDVEVAELA 851
            GL PQ EHYSCMVDI+GRSG+I+EAL L+ +MPFEADA++WR+LLSVC+I+G+VEVAE A
Sbjct: 717  GLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKA 776

Query: 850  ASSILQLDPQDSAAYVLLSNVYAEAGMWGQVSKMRQMMRQNGLKKEPGCSWIEVKSEVNT 671
              ++LQLDPQDS+A VLLSN+YA+AGMWG VS+MR+MMR N LKKEPGCSWIE+K EV+ 
Sbjct: 777  TRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHA 836

Query: 670  FLVGDKVHSKSEAIYEMLEDLIGEMKWAGYVPDMDAV 560
            FLVGDK H + E IYE L  LIGEM+  GY+PD D +
Sbjct: 837  FLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDCDVL 873