BLASTX nr result

ID: Coptis23_contig00014655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014655
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE54867.1| hypothetical protein OsJ_02356 [Oryza sativa Japo...    77   2e-12
ref|XP_003571110.1| PREDICTED: uncharacterized protein LOC100839...    73   3e-11
ref|XP_002439862.1| hypothetical protein SORBIDRAFT_09g021520 [S...    72   5e-11
ref|XP_002324126.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_003517681.1| PREDICTED: uncharacterized protein LOC100777...    71   8e-11

>gb|EEE54867.1| hypothetical protein OsJ_02356 [Oryza sativa Japonica Group]
          Length = 495

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/98 (38%), Positives = 60/98 (61%)
 Frame = +2

Query: 5   PLTSIENLSPKKTQLVCHGKSSKSLVEPKNEVSKCVKPISGSRKETEDKSTSSQRGEKCG 184
           P     N S KK +      +S S+ +PK     C   +  + +  ++ + S +R  +CG
Sbjct: 157 PTNKPRNTSHKKGE-----NNSSSMPQPKF----CDGRLMNAERNNKELNGSERRETQCG 207

Query: 185 AHGWTQDQESALQRAFFTANPSPHFWKKISKLVPGKSA 298
            + WT++Q+ AL++A+FTA PSP+FWKK+SK+VPGKSA
Sbjct: 208 LNNWTEEQDMALRKAYFTARPSPNFWKKVSKMVPGKSA 245


>ref|XP_003571110.1| PREDICTED: uncharacterized protein LOC100839407 [Brachypodium
           distachyon]
          Length = 578

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
 Frame = +2

Query: 5   PLTSIENLSPKKTQLVCHGKSSKSLVEPKNEVSKCVKPISGSRKETEDKSTSSQRG---E 175
           P+T   N+  KK++         S++EPK      +     + KE +++    +RG   +
Sbjct: 250 PITETRNIIRKKSE-----NDPSSIMEPKISDDTLM-----NTKECKEEPFGIKRGVEQQ 299

Query: 176 KCGAHGWTQDQESALQRAFFTANPSPHFWKKISKLVPGKSA 298
            C +  WT++Q+  L++A+FTA PSPHFWKK+SK+VPGKSA
Sbjct: 300 LCASDHWTEEQDLTLRQAYFTARPSPHFWKKVSKMVPGKSA 340


>ref|XP_002439862.1| hypothetical protein SORBIDRAFT_09g021520 [Sorghum bicolor]
           gi|241945147|gb|EES18292.1| hypothetical protein
           SORBIDRAFT_09g021520 [Sorghum bicolor]
          Length = 546

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
 Frame = +2

Query: 89  KNEVSKCVKPISGSRKETE-----DKSTSSQRG--EKCGAHGWTQDQESALQRAFFTANP 247
           +NE S  V P SG  + T       K + ++RG  + C +  WT++Q+ AL++A+FTA P
Sbjct: 224 ENEPSIVVMPKSGDEELTNIDENISKPSGTERGVGKFCSSDDWTKEQDMALRKAYFTARP 283

Query: 248 SPHFWKKISKLVPGKSA 298
           SPHFWK++SK+VPG+SA
Sbjct: 284 SPHFWKRVSKMVPGRSA 300


>ref|XP_002324126.1| predicted protein [Populus trichocarpa] gi|222865560|gb|EEF02691.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +2

Query: 149 KSTSSQRGEKCGAHGWTQDQESALQRAFFTANPSPHFWKKISKLVPGKSA 298
           K   ++   K    GWT+DQE ALQRAFFTA P+P+FWKK+SKLVPGKSA
Sbjct: 144 KRERAEGANKRAVEGWTKDQEMALQRAFFTAKPTPNFWKKVSKLVPGKSA 193


>ref|XP_003517681.1| PREDICTED: uncharacterized protein LOC100777884 [Glycine max]
          Length = 509

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = +2

Query: 125 GSRKETEDKSTSSQRGEKCGAHGWTQDQESALQRAFFTANPSPHFWKKISKLVPGKS 295
           G RK+ E+     + GE+  + GWT++QE ALQRA+F A PSPHFWK +SKLVPGKS
Sbjct: 213 GGRKKGENGEKRKRGGEEI-SKGWTKEQELALQRAYFAAKPSPHFWKNVSKLVPGKS 268


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