BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014643
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat...   387   e-105
ref|XP_002309575.1| predicted protein [Populus trichocarpa] gi|2...   385   e-105
ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat...   347   2e-93
ref|NP_188131.1| pentatricopeptide repeat-containing protein [Ar...   323   4e-86
dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]        321   1e-85

>ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15130 [Vitis vinifera] gi|296083673|emb|CBI23662.3|
            unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  387 bits (994), Expect = e-105
 Identities = 179/246 (72%), Positives = 213/246 (86%), Gaps = 1/246 (0%)
 Frame = +1

Query: 1    HKVKAKIEHYACMVDLLGRAGRLEEAKNLIESIPLEPNPGIWQTLLGACRVHRDLKLGRE 180
            H++K  IEHYACMVD+LGRAG+L+EAKNLIE++ L+PN GIWQTLL ACRVH +L++GRE
Sbjct: 440  HQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGRE 499

Query: 181  VGEILLNLDGENPVNYVMLSNIYAEAGEWKEYERVREVMKCKGLKKEAGCSWIEIDKEVH 360
            VGEIL  +D +NPVNYVM+SNIYAEAG WKE ERVR+++K KGLKKEAG SW+EI+KE+H
Sbjct: 500  VGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIH 559

Query: 361  YFYGGDDTHPLTERIHXXXXXXXXXXXXQTGYMYRVTFALHDVEEESKEDNLRVHSEKLA 540
            +FYGGDDTHPLTE+IH            + GY Y + FALHDVEEESKE+NLRVHSEKLA
Sbjct: 560  FFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLA 619

Query: 541  IGLGLVCGGLE-KGGIMRIFKNLRVCGDCHEFIKELSKVVKKVFVVRDANRFHRFENGVC 717
            IGL LVC G+E KGG++R+FKNLRVCGDCHEFIK LSK++KKVFVVRDANRFHRFE+G+C
Sbjct: 620  IGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLC 679

Query: 718  TCGDYW 735
            +CGDYW
Sbjct: 680  SCGDYW 685


>ref|XP_002309575.1| predicted protein [Populus trichocarpa] gi|222855551|gb|EEE93098.1|
            predicted protein [Populus trichocarpa]
          Length = 653

 Score =  385 bits (989), Expect = e-105
 Identities = 181/246 (73%), Positives = 211/246 (85%), Gaps = 1/246 (0%)
 Frame = +1

Query: 1    HKVKAKIEHYACMVDLLGRAGRLEEAKNLIESIPLEPNPGIWQTLLGACRVHRDLKLGRE 180
            H +KA++EHYACMVDLLGRAGRL+EAKNL++S+PLE N GIWQTLL ACRVH DL+LG+E
Sbjct: 408  HGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKE 467

Query: 181  VGEILLNLDGENPVNYVMLSNIYAEAGEWKEYERVREVMKCKGLKKEAGCSWIEIDKEVH 360
            VG ILL LD ENPVNYVM+SNIYA+AG WKE ER+RE++K K LKKEAG SW+EIDKEVH
Sbjct: 468  VGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVH 527

Query: 361  YFYGGDDTHPLTERIHXXXXXXXXXXXXQTGYMYRVTFALHDVEEESKEDNLRVHSEKLA 540
            +FYGGDDTHPLTE+IH            + GY+Y V +ALHDVEEESK DNLRVHSEKLA
Sbjct: 528  FFYGGDDTHPLTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLA 587

Query: 541  IGLGLVCGGLEKG-GIMRIFKNLRVCGDCHEFIKELSKVVKKVFVVRDANRFHRFENGVC 717
            IGL LVCGGLE+G  ++R+FKNLRVCGDCHEFIK LSK+++ VFVVRDANRFHRFE+G+C
Sbjct: 588  IGLALVCGGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLC 647

Query: 718  TCGDYW 735
            +C DYW
Sbjct: 648  SCRDYW 653


>ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15130-like [Glycine max]
          Length = 586

 Score =  347 bits (890), Expect = 2e-93
 Identities = 163/246 (66%), Positives = 196/246 (79%), Gaps = 2/246 (0%)
 Frame = +1

Query: 4    KVKAKIEHYACMVDLLGRAGRLEEAKNLIESIPLEPNPGIWQTLLGACRVHRDLKLGREV 183
            K+K K+EHYACMVDLLGR GRL+EAKNLIE +PL+PN GIWQTLL  CR+H D+++G++V
Sbjct: 341  KIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQV 400

Query: 184  GEILLNLDGENPVNYVMLSNIYAEAGEWKEYERVREVMKCKGLKKEAGCSWIEIDKEVHY 363
            GEILL  +G NP NYVM+SN+YA AG WKE E++RE +K KGLKKEAG SW+E+DKE+H 
Sbjct: 401  GEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHI 460

Query: 364  FYGGDDTHPLTERIHXXXXXXXXXXXXQTGYMYRVTFALHDVEEESKEDNLRVHSEKLAI 543
            FY GD  HPL E IH            + GY++ + F+LHDVEEESK ++LRVHSEKLAI
Sbjct: 461  FYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAI 520

Query: 544  GLGLVCGGLEKGG--IMRIFKNLRVCGDCHEFIKELSKVVKKVFVVRDANRFHRFENGVC 717
            GL LV  GL+  G  ++RIFKNLRVCGDCH FIK LSKV+K  FVVRDANRFHRFENG+C
Sbjct: 521  GLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLC 580

Query: 718  TCGDYW 735
            +CGDYW
Sbjct: 581  SCGDYW 586


>ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|218546753|sp|P0C898.1|PP232_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At3g15130 gi|332642102|gb|AEE75623.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  323 bits (827), Expect = 4e-86
 Identities = 148/246 (60%), Positives = 189/246 (76%), Gaps = 1/246 (0%)
 Frame = +1

Query: 1    HKVKAKIEHYACMVDLLGRAGRLEEAKNLIESIPLEPNPGIWQTLLGACRVHRDLKLGRE 180
            H +K ++EHYAC+VDLLGRAGRL+EAK+LI+++P++PN GIWQTLL  CRVH D++LG+E
Sbjct: 444  HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503

Query: 181  VGEILLNLDGENPVNYVMLSNIYAEAGEWKEYERVREVMKCKGLKKEAGCSWIEIDKEVH 360
            VG+ILL +D +NP NYVM+SN+Y +AG W E    RE+   KGLKKEAG SW+EI++EVH
Sbjct: 504  VGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVH 563

Query: 361  YFYGGDDTHPLTERIHXXXXXXXXXXXXQTGYMYRVTFALHDVEEESKEDNLRVHSEKLA 540
            +F  G+D+HPLT  I             + GY+Y +   LHD+++ESKE+NLR HSEKLA
Sbjct: 564  FFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLA 623

Query: 541  IGLGLVCGGL-EKGGIMRIFKNLRVCGDCHEFIKELSKVVKKVFVVRDANRFHRFENGVC 717
            IGL L  GGL +KG  +R+FKNLRVC DCHEFIK LSK+ K  +VVRDA RFH FE+G C
Sbjct: 624  IGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCC 683

Query: 718  TCGDYW 735
            +CGDYW
Sbjct: 684  SCGDYW 689


>dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  321 bits (823), Expect = 1e-85
 Identities = 151/264 (57%), Positives = 197/264 (74%), Gaps = 1/264 (0%)
 Frame = +1

Query: 1    HKVKAKIEHYACMVDLLGRAGRLEEAKNLIESIPLEPNPGIWQTLLGACRVHRDLKLGRE 180
            H +K ++EHYAC+VDLLGRAGRL+EAK+LI+++P++PN GIWQTLL  CRVH D++LG+E
Sbjct: 815  HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 874

Query: 181  VGEILLNLDGENPVNYVMLSNIYAEAGEWKEYERVREVMKCKGLKKEAGCSWIEIDKEVH 360
            VG+ILL +D +NP NYVM+SN+Y +AG W E    RE+   KGLKKEAG SW+EI++EVH
Sbjct: 875  VGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVH 934

Query: 361  YFYGGDDTHPLTERIHXXXXXXXXXXXXQTGYMYRVTFALHDVEEESKEDNLRVHSEKLA 540
            +F  G+D+HPLT  I             + GY+Y +   LHD+++ESKE+NLR HSEKLA
Sbjct: 935  FFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLA 994

Query: 541  IGLGLVCGGL-EKGGIMRIFKNLRVCGDCHEFIKELSKVVKKVFVVRDANRFHRFENGVC 717
            IGL L  GGL +KG  +R+FKNLRVC DCHEFIK LSK+ K  +VVRDA RFH FE+G C
Sbjct: 995  IGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCC 1054

Query: 718  TCGDYW*SFCFCICFNIEKKLLVL 789
            +CGDY      C  F+ ++K+ V+
Sbjct: 1055 SCGDY------CFFFDEQEKVAVV 1072