BLASTX nr result

ID: Coptis23_contig00014612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014612
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM64928.1| galactose-1-phosphate uridyl transferase-like pro...   308   e-113
ref|NP_197321.1| galactose-1-phosphate uridylyltransferase [Arab...   307   e-113
pdb|2H39|A Chain A, Crystal Structure Of An Adp-Glucose Phosphor...   303   e-111
ref|XP_002309518.1| predicted protein [Populus trichocarpa] gi|2...   318   e-111
emb|CBI29939.3| unnamed protein product [Vitis vinifera]              311   e-111

>gb|AAM64928.1| galactose-1-phosphate uridyl transferase-like protein [Arabidopsis
            thaliana]
          Length = 351

 Score =  308 bits (788), Expect(2) = e-113
 Identities = 156/258 (60%), Positives = 193/258 (74%), Gaps = 4/258 (1%)
 Frame = -3

Query: 1167 KTAELRKDTVLNKWVIFSPARAKRPSDFKSKSPVT-NPNPSSKPECPFCIGHEHECAPEI 991
            ++ ELRKD V N+WVIFSPARAKRP+DFKSKSP   NP PSS   CPFCIG E ECAPE+
Sbjct: 21   QSPELRKDPVTNRWVIFSPARAKRPTDFKSKSPQNPNPKPSS---CPFCIGREQECAPEL 77

Query: 990  FRVNSTTNTCSNNWKIRVIENLYPALSRNLDFESS-PKFGN--LITGFGFHDVVIESPLH 820
            FRV         NWK+RVIENLYPALSRNL+ +S+ P+ G    I GFGFHDVVIESP+H
Sbjct: 78   FRVPDH----DPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVH 133

Query: 819  TVVLSDLDGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIGLP 640
            ++ LSD+D   +GDVL+AYKKR+ Q+  ++SI Y+QVFKN GASAGASM+HSHSQM+ LP
Sbjct: 134  SIQLSDIDPVGIGDVLIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALP 193

Query: 639  IVPPSVSARFDSLKKCYDETGKCGLCEIRCEELLINESRHXXXXXXXXXXXXFELWIVPK 460
            +VPP+VS+R D  K  ++ETGKC LCE + +  +I+ES H            FE+WI+PK
Sbjct: 194  VVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYPFEIWIIPK 253

Query: 459  AHSSHFHELNNDEAVDLG 406
             HSSHFH L++ +AVDLG
Sbjct: 254  DHSSHFHHLDDVKAVDLG 271



 Score =  127 bits (320), Expect(2) = e-113
 Identities = 55/69 (79%), Positives = 64/69 (92%)
 Frame = -2

Query: 343 SRQLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGIGGFEIGSGCYINPVFPEDA 164
           ++QLNDPPYN+MIH+SP KV  SQLPY HWFLQIVPQLSG+GGFEIG+GCYINPVFPED 
Sbjct: 282 AKQLNDPPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDV 341

Query: 163 AKVLREVDV 137
           AKV+REV++
Sbjct: 342 AKVMREVNL 350


>ref|NP_197321.1| galactose-1-phosphate uridylyltransferase [Arabidopsis thaliana]
            gi|73919619|sp|Q9FK51.1|GALT_ARATH RecName: Full=Probable
            galactose-1-phosphate uridyltransferase; AltName:
            Full=Gal-1-P uridylyltransferase; AltName:
            Full=UDP-glucose--hexose-1-phosphate uridylyltransferase
            gi|66361361|pdb|1Z84|A Chain A, X-Ray Structure Of
            Galt-Like Protein From Arabidopsis Thaliana At5g18200
            gi|66361362|pdb|1Z84|B Chain B, X-Ray Structure Of
            Galt-Like Protein From Arabidopsis Thaliana At5g18200
            gi|71042524|pdb|1ZWJ|A Chain A, X-Ray Structure Of
            Galt-Like Protein From Arabidopsis Thaliana At5g18200
            gi|71042525|pdb|1ZWJ|B Chain B, X-Ray Structure Of
            Galt-Like Protein From Arabidopsis Thaliana At5g18200
            gi|150261501|pdb|2Q4H|A Chain A, Ensemble Refinement Of
            The Crystal Structure Of Galt-Like Protein From
            Arabidopsis Thaliana At5g18200 gi|150261502|pdb|2Q4H|B
            Chain B, Ensemble Refinement Of The Crystal Structure Of
            Galt-Like Protein From Arabidopsis Thaliana At5g18200
            gi|150261511|pdb|2Q4L|A Chain A, Ensemble Refinement Of
            The Crystal Structure Of Galt-Like Protein From
            Arabidopsis Thaliana At5g18200 gi|150261512|pdb|2Q4L|B
            Chain B, Ensemble Refinement Of The Crystal Structure Of
            Galt-Like Protein From Arabidopsis Thaliana At5g18200
            gi|9758902|dbj|BAB09478.1| galactose-1-phosphate uridyl
            transferase-like protein [Arabidopsis thaliana]
            gi|28973757|gb|AAO64194.1| putative galactose-1-phosphate
            uridyl transferase [Arabidopsis thaliana]
            gi|332005135|gb|AED92518.1| galactose-1-phosphate
            uridylyltransferase [Arabidopsis thaliana]
          Length = 351

 Score =  307 bits (787), Expect(2) = e-113
 Identities = 155/258 (60%), Positives = 193/258 (74%), Gaps = 4/258 (1%)
 Frame = -3

Query: 1167 KTAELRKDTVLNKWVIFSPARAKRPSDFKSKSPVT-NPNPSSKPECPFCIGHEHECAPEI 991
            ++ ELRKD V N+WVIFSPARAKRP+DFKSKSP   NP PSS   CPFCIG E ECAPE+
Sbjct: 21   QSPELRKDPVTNRWVIFSPARAKRPTDFKSKSPQNPNPKPSS---CPFCIGREQECAPEL 77

Query: 990  FRVNSTTNTCSNNWKIRVIENLYPALSRNLDFESS-PKFGN--LITGFGFHDVVIESPLH 820
            FRV         NWK+RVIENLYPALSRNL+ +S+ P+ G    I GFGFHDVVIESP+H
Sbjct: 78   FRVPDH----DPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVH 133

Query: 819  TVVLSDLDGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIGLP 640
            ++ LSD+D   +GD+L+AYKKR+ Q+  ++SI Y+QVFKN GASAGASM+HSHSQM+ LP
Sbjct: 134  SIQLSDIDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALP 193

Query: 639  IVPPSVSARFDSLKKCYDETGKCGLCEIRCEELLINESRHXXXXXXXXXXXXFELWIVPK 460
            +VPP+VS+R D  K  ++ETGKC LCE + +  +I+ES H            FE+WI+PK
Sbjct: 194  VVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYPFEIWIIPK 253

Query: 459  AHSSHFHELNNDEAVDLG 406
             HSSHFH L++ +AVDLG
Sbjct: 254  DHSSHFHHLDDVKAVDLG 271



 Score =  127 bits (319), Expect(2) = e-113
 Identities = 55/69 (79%), Positives = 63/69 (91%)
 Frame = -2

Query: 343 SRQLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGIGGFEIGSGCYINPVFPEDA 164
           ++QLNDPPYN+MIH+SP KV  SQLPY HWFLQIVPQLSG+GGFEIG+GCYINPVFPED 
Sbjct: 282 AKQLNDPPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDV 341

Query: 163 AKVLREVDV 137
           AKV+REV +
Sbjct: 342 AKVMREVSL 350


>pdb|2H39|A Chain A, Crystal Structure Of An Adp-Glucose Phosphorylase From
            Arabidopsis Thaliana With Bound Adp-Glucose
            gi|110590523|pdb|2H39|B Chain B, Crystal Structure Of An
            Adp-Glucose Phosphorylase From Arabidopsis Thaliana With
            Bound Adp-Glucose
          Length = 351

 Score =  303 bits (777), Expect(2) = e-111
 Identities = 154/258 (59%), Positives = 192/258 (74%), Gaps = 4/258 (1%)
 Frame = -3

Query: 1167 KTAELRKDTVLNKWVIFSPARAKRPSDFKSKSPVT-NPNPSSKPECPFCIGHEHECAPEI 991
            ++ ELRKD V N+WVIFSPARAKRP+DFKSKSP   NP PSS   CPFCIG E ECAPE+
Sbjct: 21   QSPELRKDPVTNRWVIFSPARAKRPTDFKSKSPQNPNPKPSS---CPFCIGREQECAPEL 77

Query: 990  FRVNSTTNTCSNNWKIRVIENLYPALSRNLDFESS-PKFGN--LITGFGFHDVVIESPLH 820
            FRV         NWK+RVIENLYPALSRNL+ +S+ P+ G    I GFGFHDVVIESP+H
Sbjct: 78   FRVPDH----DPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVH 133

Query: 819  TVVLSDLDGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIGLP 640
            ++ LSD+D   +GD+L+AYKKR+ Q+  ++SI Y+QVFKN GASAGASM+HS SQM+ LP
Sbjct: 134  SIQLSDIDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSGSQMMALP 193

Query: 639  IVPPSVSARFDSLKKCYDETGKCGLCEIRCEELLINESRHXXXXXXXXXXXXFELWIVPK 460
            +VPP+VS+R D  K  ++ETGKC LCE + +  +I+ES H            FE+WI+PK
Sbjct: 194  VVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYPFEIWIIPK 253

Query: 459  AHSSHFHELNNDEAVDLG 406
             HSSHFH L++ +AVDLG
Sbjct: 254  DHSSHFHHLDDVKAVDLG 271



 Score =  127 bits (319), Expect(2) = e-111
 Identities = 55/69 (79%), Positives = 63/69 (91%)
 Frame = -2

Query: 343 SRQLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGIGGFEIGSGCYINPVFPEDA 164
           ++QLNDPPYN+MIH+SP KV  SQLPY HWFLQIVPQLSG+GGFEIG+GCYINPVFPED 
Sbjct: 282 AKQLNDPPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDV 341

Query: 163 AKVLREVDV 137
           AKV+REV +
Sbjct: 342 AKVMREVSL 350


>ref|XP_002309518.1| predicted protein [Populus trichocarpa] gi|222855494|gb|EEE93041.1|
            predicted protein [Populus trichocarpa]
          Length = 348

 Score =  318 bits (816), Expect(2) = e-111
 Identities = 154/259 (59%), Positives = 199/259 (76%), Gaps = 5/259 (1%)
 Frame = -3

Query: 1167 KTAELRKDTVLNKWVIFSPARAKRPSDFKSKSPVTNPNPSSKPECPFCIGHEHECAPEIF 988
            ++ ELR D V N+WVIFSPARAKRP+DFKSK+P  NPNP++   CPFCIG+EHECAPEIF
Sbjct: 10   RSPELRHDPVTNRWVIFSPARAKRPTDFKSKNP-QNPNPNNNSLCPFCIGNEHECAPEIF 68

Query: 987  RVNSTTNTCSNNWKIRVIENLYPALSRNLDFESSPKFG-----NLITGFGFHDVVIESPL 823
            RV    N    NWK+RVIENLYPALSRNL+     K G      +I GFGFHDVVIE+P+
Sbjct: 69   RVPPDLN--DPNWKLRVIENLYPALSRNLECPCEEKQGMEFPGRVIGGFGFHDVVIENPV 126

Query: 822  HTVVLSDLDGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIGL 643
            H+V LSD++  ++G+V LA+KKR+QQ+M  +SI+YVQVFKNHGASAGASM+HSHSQ++ L
Sbjct: 127  HSVQLSDMEPREIGEVFLAHKKRIQQIMSVQSIKYVQVFKNHGASAGASMSHSHSQILAL 186

Query: 642  PIVPPSVSARFDSLKKCYDETGKCGLCEIRCEELLINESRHXXXXXXXXXXXXFELWIVP 463
            P++P SVSAR + +K+ +++TGKC LCE+R +EL+I+ES H            FE+WI+P
Sbjct: 187  PVIPSSVSARLEGMKEYFEKTGKCSLCEVRAKELVIDESSHFISIVPFAATFPFEIWIIP 246

Query: 462  KAHSSHFHELNNDEAVDLG 406
            + HSSHFHE + ++ VDLG
Sbjct: 247  RVHSSHFHEFDFEKMVDLG 265



 Score =  111 bits (278), Expect(2) = e-111
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = -2

Query: 343 SRQLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGIGGFEIGSGCYINPVFPEDA 164
           S QLN+PP+NFMI +SP ++  S+  Y HWFLQIVPQLSG+GGFEIG+GCYINPV PEDA
Sbjct: 276 SLQLNNPPFNFMIQTSPVQIKESESCYTHWFLQIVPQLSGVGGFEIGTGCYINPVLPEDA 335

Query: 163 AKVLREVDV 137
           AKV+REV++
Sbjct: 336 AKVMREVNL 344


>emb|CBI29939.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  311 bits (796), Expect(2) = e-111
 Identities = 152/251 (60%), Positives = 194/251 (77%)
 Frame = -3

Query: 1158 ELRKDTVLNKWVIFSPARAKRPSDFKSKSPVTNPNPSSKPECPFCIGHEHECAPEIFRVN 979
            E+RKDTV N+WV+FSPARA+RPSDFKSK    NPN  ++ ECPFC GHEHECAPEIFR  
Sbjct: 32   EIRKDTVTNRWVVFSPARARRPSDFKSKDSA-NPN-HTQSECPFCSGHEHECAPEIFRFP 89

Query: 978  STTNTCSNNWKIRVIENLYPALSRNLDFESSPKFGNLITGFGFHDVVIESPLHTVVLSDL 799
              +     +WKIRVI+NLYPALSR++    S   G ++TGFGFHDVVIESP+H V LSDL
Sbjct: 90   PDSTV---DWKIRVIQNLYPALSRDVQLNPSSD-GMVLTGFGFHDVVIESPVHAVHLSDL 145

Query: 798  DGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIGLPIVPPSVS 619
              S+V +VLLAYKKR+ QL  ++S++Y+QVFKNHGASAGASM+HSHSQ++ LPIVPP+VS
Sbjct: 146  SPSEVAEVLLAYKKRIHQLSFHQSVKYIQVFKNHGASAGASMSHSHSQIMALPIVPPTVS 205

Query: 618  ARFDSLKKCYDETGKCGLCEIRCEELLINESRHXXXXXXXXXXXXFELWIVPKAHSSHFH 439
            +R D +K  ++ETGKC +CE+  ++LLI+ES H            FE+WIVP+ HS HFH
Sbjct: 206  SRLDCMKGYFEETGKCSVCEMSVKDLLIDESTHYISIIPFAATFPFEIWIVPRDHSPHFH 265

Query: 438  ELNNDEAVDLG 406
            E+++++AVDLG
Sbjct: 266  EIDSEKAVDLG 276



 Score =  117 bits (294), Expect(2) = e-111
 Identities = 53/69 (76%), Positives = 61/69 (88%)
 Frame = -2

Query: 343 SRQLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGIGGFEIGSGCYINPVFPEDA 164
           S QLN PP+NFMIH+SP +V  S L Y HWFLQIVPQL+GIGGFE+G+GCYINPVFPEDA
Sbjct: 287 SLQLNSPPFNFMIHTSPLQVTDSLLSYTHWFLQIVPQLTGIGGFELGTGCYINPVFPEDA 346

Query: 163 AKVLREVDV 137
           AKVLREV++
Sbjct: 347 AKVLREVNL 355


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