BLASTX nr result

ID: Coptis23_contig00014600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014600
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526758.1| Disease resistance protein RGA2, putative [R...    67   2e-09
gb|ADB43255.1| blight resistance protein [Capsicum annuum]             65   1e-08
ref|XP_003613271.1| NBS-LRR resistance protein [Medicago truncat...    64   3e-08
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08
gb|AAO37646.1| NBS-LRR resistance protein RGH2 [Manihot esculenta]     63   4e-08

>ref|XP_002526758.1| Disease resistance protein RGA2, putative [Ricinus communis]
            gi|223533885|gb|EEF35612.1| Disease resistance protein
            RGA2, putative [Ricinus communis]
          Length = 1100

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
 Frame = -3

Query: 584  NLKSLYIYSLPHS-SLPQGLNQLTSLQQLSFY*CEFLDFKPEELKPLTMLRKLEIKGCPI 408
            +L+ L I +L    SL QGL  +T+LQQL    C  L   PE +  LT LR LEI  CP+
Sbjct: 1004 SLRKLRIVNLAKLVSLHQGLQHVTTLQQLEICSCPILGTLPEWISGLTTLRHLEINECPL 1063

Query: 407  ITRE--RSREEDWSILTHIPNIHIDDKDIKSK 318
            ++++   ++ EDWS + HIPNI ID + I+ K
Sbjct: 1064 LSQKCSNNKGEDWSKIAHIPNIKIDGRWIQLK 1095


>gb|ADB43255.1| blight resistance protein [Capsicum annuum]
          Length = 994

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
 Frame = -3

Query: 602  SLTHNNNLKSL---YIYSLPHSSLPQ-GLNQLTSLQQLSFY*CEFLDFKPEELKPLTMLR 435
            SLT  N+LK L   Y Y+L   SLP+ GL  LTSL +L    C  L   PE L+ LT L 
Sbjct: 903  SLTSLNDLKCLDIRYCYAL--ESLPEEGLEGLTSLMELFVEHCNMLKSLPEALQHLTALT 960

Query: 434  KLEIKGCPIITR--ERSREEDWSILTHIPNIHI 342
             L + GCP + +  ER   EDW  + HIPN++I
Sbjct: 961  NLRVTGCPEVAKRCERGTGEDWHKIAHIPNVYI 993


>ref|XP_003613271.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355514606|gb|AES96229.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 932

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
 Frame = -3

Query: 599  LTHNNNLKSLYIYSLPH-SSLPQGLNQLTSLQQLSFY*CEFLDFKPEELKPLTMLRKLEI 423
            L H  +L+SL +  LP+ +SLP  L +L SLQ+L    C  L   P  ++ L+ L+ L I
Sbjct: 789  LQHVTSLQSLSLLCLPNLTSLPDSLGKLCSLQKLGIRDCPKLICLPTSIQSLSALKSLSI 848

Query: 422  KGCPIITRERSRE--EDWSILTHIPNIHIDDKDIKSKTDLV 306
             GCP + +   RE  EDW  ++HI N+H    D+K  T LV
Sbjct: 849  CGCPELEKRCKRETGEDWPKISHIQNLH----DLKEGTPLV 885


>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
 Frame = -3

Query: 629 VGVLSKSLMS--LTHNNNLKSLYIYS-LPHSSLPQGLNQLTSLQQLSFY*CEFLDFKPEE 459
           VG L  + +S  L H   LK LY+   +  +SLP+ +  LTSL +L  + C  L   PE 
Sbjct: 371 VGCLELTSISEGLQHLTALKDLYLAGCVKLNSLPENIQHLTSLSRLRIHGCSNLMSLPEG 430

Query: 458 LKPLTMLRKLEIKGCPIITRERSRE--EDWSILTHIPNIHIDDKDIKS 321
           ++ L MLR+ EI  CP + R+  RE  +DW  + HIP I I+ + I+S
Sbjct: 431 IRNLEMLREFEIADCPNLERQCKREKGKDWPKIAHIPTIIINAQLIQS 478


>gb|AAO37646.1| NBS-LRR resistance protein RGH2 [Manihot esculenta]
          Length = 1024

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
 Frame = -3

Query: 620  LSKSLMSLTHNNNLKSLYIYSLPH--SSLPQGLNQLTSLQQLSFY*CEFLDFKPEELKPL 447
            +S S   +   + LK L+I  +    S  P GL  LT LQ+L+   C  +   P+E++ L
Sbjct: 889  ISSSSSIIPPLSKLKILWIRDIKELESLPPDGLRNLTCLQRLTIQICPAIKCLPQEMRSL 948

Query: 446  TMLRKLEIKGCPIITRE--RSREEDWSILTHIPNIHIDDKDIK 324
            T LR+L I  CP +       +  DW+ ++HIPNI +DD+ I+
Sbjct: 949  TSLRELNINDCPQLKERCGNRKGADWAFISHIPNIEVDDQRIQ 991


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