BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014596
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEN56112.1| ribosomal protein S13 [Cucumis melo subsp. melo]       227   3e-57
ref|YP_006291804.1| rps13 gene product (mitochondrion) [Daucus c...   226   8e-57
ref|YP_004237265.1| ribosomal protein S13 (mitochondrion) [Ricin...   223   9e-56
ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus] gi...   222   1e-55
ref|YP_002608196.1| ribosomal protein S13 [Carica papaya] gi|170...   221   3e-55

>gb|AEN56112.1| ribosomal protein S13 [Cucumis melo subsp. melo]
          Length = 116

 Score =  227 bits (579), Expect = 3e-57
 Identities = 110/116 (94%), Positives = 115/116 (99%)
 Frame = +2

Query: 614 MSYISGARSVPDKQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 793
           MSYISGARSV DKQVRIAST+IDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQ+EQMI
Sbjct: 1   MSYISGARSVADKQVRIASTQIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 794 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 961
           GQDH+VHWELKRGERADIERFIS+SCYRGIRHQDGLPLRGQRTHTNARTCRK+IRK
Sbjct: 61  GQDHIVHWELKRGERADIERFISLSCYRGIRHQDGLPLRGQRTHTNARTCRKRIRK 116


>ref|YP_006291804.1| rps13 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|12906|emb|CAA38281.1| ribosomal protein S13 [Daucus
           carota] gi|374081938|gb|AEY81130.1| ribosomal protein
           S13 (mitochondrion) [Daucus carota subsp. sativus]
          Length = 116

 Score =  226 bits (576), Expect = 8e-57
 Identities = 112/116 (96%), Positives = 113/116 (97%)
 Frame = +2

Query: 614 MSYISGARSVPDKQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 793
           M YISGARSV DKQVRIASTK+ GIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI
Sbjct: 1   MLYISGARSVADKQVRIASTKMYGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 60

Query: 794 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 961
           GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 116


>ref|YP_004237265.1| ribosomal protein S13 (mitochondrion) [Ricinus communis]
           gi|322394272|gb|ADW96029.1| ribosomal protein S13
           (mitochondrion) [Ricinus communis]
          Length = 116

 Score =  223 bits (567), Expect = 9e-56
 Identities = 110/116 (94%), Positives = 112/116 (96%)
 Frame = +2

Query: 614 MSYISGARSVPDKQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 793
           MSYISGAR V D+QVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQID+MEQMI
Sbjct: 1   MSYISGARLVADEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDKMEQMI 60

Query: 794 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 961
           GQDHVVHWELKRGERADIER ISISCYRGIRHQDGLPLRGQRTHTNARTCRK IRK
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKLIRK 116


>ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus]
           gi|259156787|gb|ACV96649.1| ribosomal protein S13
           [Citrullus lanatus]
          Length = 116

 Score =  222 bits (565), Expect = 1e-55
 Identities = 109/116 (93%), Positives = 112/116 (96%)
 Frame = +2

Query: 614 MSYISGARSVPDKQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 793
           MSYISGAR V DKQVRIA TKIDGIGPKKAIQV YRLGISGNIKIKELTKYQIDQ+EQMI
Sbjct: 1   MSYISGARFVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 794 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 961
           GQDH+VHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK+IRK
Sbjct: 61  GQDHIVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKRIRK 116


>ref|YP_002608196.1| ribosomal protein S13 [Carica papaya] gi|170522375|gb|ACB20485.1|
           ribosomal protein S13 (mitochondrion) [Carica papaya]
          Length = 116

 Score =  221 bits (562), Expect = 3e-55
 Identities = 109/116 (93%), Positives = 112/116 (96%)
 Frame = +2

Query: 614 MSYISGARSVPDKQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 793
           MSYISGAR V ++QVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQ+EQMI
Sbjct: 1   MSYISGARLVANEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 794 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 961
           GQDHVVHWELKRGERADIERFISISCYRGIRHQDG PLRGQRTHTNARTCRK IRK
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGSPLRGQRTHTNARTCRKLIRK 116