BLASTX nr result

ID: Coptis23_contig00014584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014584
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis v...   492   e-137
gb|AAL18926.1|AF429385_1 phosphomevalonate kinase [Hevea brasili...   487   e-135
ref|XP_004136210.1| PREDICTED: probable phosphomevalonate kinase...   481   e-133
ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatul...   478   e-132
dbj|BAF98284.1| 5-phosphomevelonate kinase [Hevea brasiliensis]       473   e-131

>ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis vinifera]
            gi|297742018|emb|CBI33805.3| unnamed protein product
            [Vitis vinifera]
          Length = 508

 Score =  492 bits (1267), Expect = e-137
 Identities = 262/424 (61%), Positives = 299/424 (70%)
 Frame = -1

Query: 1274 IGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLTSP 1095
            + SAPGKVLMTGGYLILER NAG+VLSTNARFYAIVKP+   ++PDSWAW WTDVKLTSP
Sbjct: 4    VASAPGKVLMTGGYLILERPNAGIVLSTNARFYAIVKPLREDIEPDSWAWAWTDVKLTSP 63

Query: 1094 QLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXAHVXXXXXXXXXXXXXXXXX 915
            QLSRET+YK+SLKNL LQC+SS E  NPFVE         A                   
Sbjct: 64   QLSRETMYKMSLKNLMLQCVSSSESRNPFVEQAVQYTIAAARATLDKNNNDFLHTKLLQG 123

Query: 914  XXXITILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTG 735
                TILG NDFYSYRN IEA GLPLT + LA+LP F+ ITFNAE S G NCKPEVAKTG
Sbjct: 124  LDI-TILGCNDFYSYRNYIEARGLPLTPDVLAALPPFTPITFNAEESNGENCKPEVAKTG 182

Query: 734  LGXXXXXXXXXXXXXLQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGS 555
            LG             L Y GVVNLS   +  +QEKD  +LDLVHV+AQSAHCIAQGK+GS
Sbjct: 183  LGSSAAMTTSVVAALLHYFGVVNLSSLNKDQHQEKDCVDLDLVHVIAQSAHCIAQGKVGS 242

Query: 554  GFDVSAAVYGSQRYVRFSPRVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXXX 375
            GFDVS+AVYGSQRYVRFSP VLSSAQVA+K   +QEVI D+LK  WDHE+TKF       
Sbjct: 243  GFDVSSAVYGSQRYVRFSPEVLSSAQVAVKGLPIQEVIHDILKGNWDHERTKFSLPPLMT 302

Query: 374  XXXXXXXXXXXXXXSMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFAEEQW 195
                          SMVGAVKKWQ S+P+KS+E WR LS ANSALETQ K+L K AEE W
Sbjct: 303  LLLGEPGAGGSSTPSMVGAVKKWQKSDPEKSLETWRKLSAANSALETQFKILSKLAEENW 362

Query: 194  ESYEHVICSCSGLRCEQWKEQATGVFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIE 15
            ++Y+ VI SCS  R E+W E+ATG  +EA+V ALL ARDA+ +IR +MR MG+ AG+PIE
Sbjct: 363  DAYKCVINSCSIHRSEKWMERATGPDQEAVVNALLAARDAMLRIRSNMRQMGEAAGIPIE 422

Query: 14   PESQ 3
            P SQ
Sbjct: 423  PNSQ 426


>gb|AAL18926.1|AF429385_1 phosphomevalonate kinase [Hevea brasiliensis]
          Length = 503

 Score =  487 bits (1253), Expect = e-135
 Identities = 263/424 (62%), Positives = 303/424 (71%)
 Frame = -1

Query: 1274 IGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLTSP 1095
            + SAPGKVLMTGGYLILER NAG+VLSTNARFYAIVKPIY+ +KPDSWAW WTDVKLTSP
Sbjct: 4    VASAPGKVLMTGGYLILERPNAGIVLSTNARFYAIVKPIYDEIKPDSWAWAWTDVKLTSP 63

Query: 1094 QLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXAHVXXXXXXXXXXXXXXXXX 915
            QL+RE++YKLSLKNL LQC+SS    NPFVE         AH                  
Sbjct: 64   QLARESLYKLSLKNLALQCVSSSASRNPFVEQAVQFAVAAAHA-TLDKDKKNVLNKLLLQ 122

Query: 914  XXXITILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTG 735
               ITILG+NDFYSYRN+IEA GLPLT ESLA+LP+FSSITFN E + G NCKPEVAKTG
Sbjct: 123  GLDITILGTNDFYSYRNEIEACGLPLTPESLAALPSFSSITFNVEEANGQNCKPEVAKTG 182

Query: 734  LGXXXXXXXXXXXXXLQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGS 555
            LG             L +LG+V+LS S     +EK  ++LDLVH++AQ+AHCIAQGK+GS
Sbjct: 183  LGSSAAMTTAVVAALLHHLGLVDLSSSC----KEKKFSDLDLVHIIAQTAHCIAQGKVGS 238

Query: 554  GFDVSAAVYGSQRYVRFSPRVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXXX 375
            GFDVS+AVYGS RYVRFSP VLSSAQ A K   LQEVIS++LK KWDHE+T F       
Sbjct: 239  GFDVSSAVYGSHRYVRFSPEVLSSAQDAGKGIPLQEVISNILKGKWDHERTMFSLPPLMS 298

Query: 374  XXXXXXXXXXXXXXSMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFAEEQW 195
                          SMVGA+KKWQ S+ QKS E WR LSEANSALETQ  +L K AEE W
Sbjct: 299  LLLGEPGTGGSSTPSMVGALKKWQKSDTQKSQETWRKLSEANSALETQFNILSKLAEEHW 358

Query: 194  ESYEHVICSCSGLRCEQWKEQATGVFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIE 15
            ++Y+ VI SCS    E+W EQAT   REA+VKALLG+R+A+ QIR +MR MG+ AGVPIE
Sbjct: 359  DAYKCVIDSCSTKNSEKWIEQATEPSREAVVKALLGSRNAMLQIRNYMRQMGEAAGVPIE 418

Query: 14   PESQ 3
            PESQ
Sbjct: 419  PESQ 422


>ref|XP_004136210.1| PREDICTED: probable phosphomevalonate kinase-like [Cucumis sativus]
            gi|449508038|ref|XP_004163199.1| PREDICTED: probable
            phosphomevalonate kinase-like [Cucumis sativus]
          Length = 507

 Score =  481 bits (1237), Expect = e-133
 Identities = 254/424 (59%), Positives = 295/424 (69%)
 Frame = -1

Query: 1274 IGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLTSP 1095
            + SAPGKVLMTGGYL+LE+ NAGLVLSTNARFYAIVKPIY  +KPDSWAW WTD+KLTSP
Sbjct: 4    VASAPGKVLMTGGYLVLEKPNAGLVLSTNARFYAIVKPIYEEIKPDSWAWSWTDIKLTSP 63

Query: 1094 QLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXAHVXXXXXXXXXXXXXXXXX 915
            QL RE++YKLSLKN +L+ +S  +  NPFVE         A                   
Sbjct: 64   QLLRESIYKLSLKNQSLESVSPSQSRNPFVERAVEYCVAAASAKFVDKDNKNALHKLLLQ 123

Query: 914  XXXITILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTG 735
               ITILG N+FYSYR+QIEA GLPLT+ESLASLP FSSITFN E S G NCKPEVAKTG
Sbjct: 124  GLDITILGCNEFYSYRSQIEARGLPLTSESLASLPPFSSITFNDEESLGKNCKPEVAKTG 183

Query: 734  LGXXXXXXXXXXXXXLQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGS 555
            LG             L YLGVVNLS  T    +++  A LDLVH++AQSAHCIAQGK+GS
Sbjct: 184  LGSSAAMTAAVVAALLNYLGVVNLSLLTGD-QEQRGSAGLDLVHIIAQSAHCIAQGKVGS 242

Query: 554  GFDVSAAVYGSQRYVRFSPRVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXXX 375
            GFDVS+AVYGSQRYVRFSP VLSSAQ A     ++EVI D+L  KWDHE+TKF       
Sbjct: 243  GFDVSSAVYGSQRYVRFSPEVLSSAQAAKNGIPIEEVIVDILNQKWDHERTKFSLPPLMT 302

Query: 374  XXXXXXXXXXXXXXSMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFAEEQW 195
                          SMVGAVKKWQ S+PQKS++ WR LSE NS LETQL  L K A E W
Sbjct: 303  LVLGEPGVGGSSTPSMVGAVKKWQKSDPQKSLDTWRKLSEGNSELETQLNTLHKLAAEHW 362

Query: 194  ESYEHVICSCSGLRCEQWKEQATGVFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIE 15
            ++Y+++I SC  L  E+W  QAT   ++AI+KALLGAR+A+ QIR HMR MG+ AGVPIE
Sbjct: 363  DAYKYIINSCCKLTSEKWIHQATEPSQQAIIKALLGARNAMLQIRHHMRSMGEAAGVPIE 422

Query: 14   PESQ 3
            P+SQ
Sbjct: 423  PDSQ 426


>ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatula]
            gi|355491268|gb|AES72471.1| Phosphomevalonate kinase
            [Medicago truncatula]
          Length = 508

 Score =  478 bits (1231), Expect = e-132
 Identities = 252/424 (59%), Positives = 302/424 (71%)
 Frame = -1

Query: 1274 IGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLTSP 1095
            + SAPGKVLMTGGYL+LER NAGLVLSTNARFYAIVKPIY   KPDSWAW W+DV+LTSP
Sbjct: 5    VASAPGKVLMTGGYLVLERPNAGLVLSTNARFYAIVKPIYPQTKPDSWAWAWSDVRLTSP 64

Query: 1094 QLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXAHVXXXXXXXXXXXXXXXXX 915
            QLSRE  YKL+LKNLT+Q +SS E  NPFVE         A+                  
Sbjct: 65   QLSREAFYKLALKNLTIQTVSSSETRNPFVEYAVQYSVAAAYATADQNKKDLLHKLLLQG 124

Query: 914  XXXITILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTG 735
                TILGSNDFYSYRN+IE  GLPLT+ESLA+LP F+SI+FN + + G NCKPEVAKTG
Sbjct: 125  LDI-TILGSNDFYSYRNEIERHGLPLTSESLATLPPFASISFNTDDANGGNCKPEVAKTG 183

Query: 734  LGXXXXXXXXXXXXXLQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGS 555
            LG             L YLGVV +S S++   + KD A+LD+VH +AQ+AHCIAQGK+GS
Sbjct: 184  LGSSAAMTTAVVAALLHYLGVVKIS-SSKDRQERKDIADLDMVHKIAQTAHCIAQGKVGS 242

Query: 554  GFDVSAAVYGSQRYVRFSPRVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXXX 375
            GFDVS+AVYGS RYVRFSP V+SS QVA     L EVISD+LK  WDH++T+F       
Sbjct: 243  GFDVSSAVYGSHRYVRFSPEVISSTQVAATVVPLPEVISDILKGNWDHDRTEFSLPPLMT 302

Query: 374  XXXXXXXXXXXXXXSMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFAEEQW 195
                          SMVG+VKKWQ S+PQKS+E WR LSEANSALE QL LL K A+EQW
Sbjct: 303  LVLGEPGTGGSSTPSMVGSVKKWQKSDPQKSLETWRRLSEANSALEIQLNLLRKLAKEQW 362

Query: 194  ESYEHVICSCSGLRCEQWKEQATGVFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIE 15
            ++Y+ VI +CS LR ++W EQA+   +EA++KALLG+++A+  IR+HMRLMG+ AGVPIE
Sbjct: 363  DAYKSVIDNCSILRSDKWIEQASDSNKEAVIKALLGSKEAMVGIRYHMRLMGEAAGVPIE 422

Query: 14   PESQ 3
            PESQ
Sbjct: 423  PESQ 426


>dbj|BAF98284.1| 5-phosphomevelonate kinase [Hevea brasiliensis]
          Length = 503

 Score =  473 bits (1218), Expect = e-131
 Identities = 257/424 (60%), Positives = 300/424 (70%)
 Frame = -1

Query: 1274 IGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLTSP 1095
            + SAPGK +MTGGYLILER NAG+VLSTNARFYAIVKP+Y+ +KPDSWAW WTDVKLTSP
Sbjct: 4    VASAPGKGVMTGGYLILERPNAGIVLSTNARFYAIVKPMYDEIKPDSWAWAWTDVKLTSP 63

Query: 1094 QLSRETVYKLSLKNLTLQCISSRELGNPFVEXXXXXXXXXAHVXXXXXXXXXXXXXXXXX 915
            QL+RE++YKLSLKNL LQC+SS    NPFVE         AH                  
Sbjct: 64   QLARESLYKLSLKNLALQCVSSSASRNPFVEQAVQFAVAAAHA-TLDKDKNNVLNKLLLQ 122

Query: 914  XXXITILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKTG 735
               ITILG++D YS RN+IEA GLPLT ESLA+LP+FSSITFN E + G NCKPEVAKTG
Sbjct: 123  GLDITILGTSDCYSCRNEIEACGLPLTPESLAALPSFSSITFNVEEANGQNCKPEVAKTG 182

Query: 734  LGXXXXXXXXXXXXXLQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIGS 555
            LG             L +LG+V+LS S     +EK  ++LDLVH++AQ+AHCIAQGK+GS
Sbjct: 183  LGSSAAMTTAVVAALLHHLGLVDLSSSC----KEKKFSDLDLVHIIAQTAHCIAQGKVGS 238

Query: 554  GFDVSAAVYGSQRYVRFSPRVLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXXX 375
            GFDVS+AVYGS RYVRFSP VLSSAQ A K   LQEVIS++LK KWDHE+T F       
Sbjct: 239  GFDVSSAVYGSHRYVRFSPEVLSSAQDAGKGIPLQEVISNILKGKWDHERTMFSLPPLMS 298

Query: 374  XXXXXXXXXXXXXXSMVGAVKKWQVSEPQKSMERWRMLSEANSALETQLKLLCKFAEEQW 195
                          SMVGA+KKWQ S+ QKS E WR LSEANSALETQ  +L K AEE W
Sbjct: 299  LLLGEPGTGGSSTPSMVGALKKWQKSDTQKSQETWRKLSEANSALETQFNILSKLAEEHW 358

Query: 194  ESYEHVICSCSGLRCEQWKEQATGVFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIE 15
            ++Y+ VI SCS    E+W EQAT   REA+VKALLG+R+A+ QIR +MR MG+ AGVPIE
Sbjct: 359  DAYKCVIDSCSTKNSEKWIEQATEPSREAVVKALLGSRNAMLQIRNYMRQMGEAAGVPIE 418

Query: 14   PESQ 3
            PESQ
Sbjct: 419  PESQ 422


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