BLASTX nr result

ID: Coptis23_contig00014570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014570
         (1693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001168705.1| uncharacterized protein LOC100382497 [Zea ma...   123   2e-54
ref|XP_002442453.1| hypothetical protein SORBIDRAFT_08g020220 [S...   125   5e-54
ref|XP_002262784.1| PREDICTED: uncharacterized protein LOC100258...   116   1e-51
ref|XP_003568114.1| PREDICTED: uncharacterized protein LOC100835...   124   3e-51
ref|XP_003556476.1| PREDICTED: uncharacterized protein LOC100811...   118   1e-50

>ref|NP_001168705.1| uncharacterized protein LOC100382497 [Zea mays]
            gi|223950329|gb|ACN29248.1| unknown [Zea mays]
            gi|224030155|gb|ACN34153.1| unknown [Zea mays]
          Length = 751

 Score =  123 bits (308), Expect(3) = 2e-54
 Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 3/251 (1%)
 Frame = -2

Query: 777  LFPVAVFICRGKNKETWGTFLGIMHEYLSDHEQN---LTFMSDI*KGLKEVLPLIFPRAA 607
            LFP+A  +   +  E W  FL  +HE L  + +N   LT +SD  KG+ + +   FP A 
Sbjct: 401  LFPLAFGVVDEETDENWVWFLSELHELLEKNTENMPRLTILSDRRKGITDGVEFNFPTAF 460

Query: 606  HRFCFRHMYKNFKKEYKGGKLFEELCWGAARAYRLSDCNKILAGLEKHDKNAVEWLKKRD 427
            H +C RH+ + FKKE+    L   L W AA A  + +    L  +E     AV W++   
Sbjct: 461  HGYCMRHVSEAFKKEFNNPVL-ANLLWEAAHALTVIEFETKLLEIEDASPEAVVWIRHLP 519

Query: 426  VTTWCRSHFWSHTKSEHVTNNWSESFNN*IMDLRDKPLFTFVEELDLMLMTLMRKRRAKA 247
               W  ++F   T+  H+T N +ES N+ I+D    P+   +E +   LMT   +RR  +
Sbjct: 520  SRLWATAYF-EGTRYGHLTANIAESLNSWILDASGLPIVQMMECIRRQLMTWFNERREAS 578

Query: 246  MELDINDVVPRVKAIHAKQEKYIQHYTYRSATDTYFTVFSSHGSRWLVNLDKQECECNVW 67
            M+ +   +VP  +    +  +  + Y    A +  F V S+H    +V++  + C C  W
Sbjct: 579  MQWN-TILVPAAERRVQEAIERARGYQVARANEAEFEVISAHEGTNVVDIRNRCCLCRGW 637

Query: 66   QINGIPCIHGL 34
            Q+ G+PC HG+
Sbjct: 638  QLYGVPCAHGV 648



 Score =  111 bits (278), Expect(3) = 2e-54
 Identities = 66/188 (35%), Positives = 93/188 (49%)
 Frame = -1

Query: 1351 SKCRGNECTWLFYAKVIKSKKSDGFTTRCNKYEGQHSGKCIGDSKFKNRLADAIWVAEKM 1172
            +KC    C W  +A  +    +    T        HS  C+G +   ++ A   WVA  +
Sbjct: 218  AKCAAESCPWRIHAAKLPGVPTFSIRT----IHDNHS--CVGINHLGHQQASVQWVANTV 271

Query: 1171 LDTVRTHHKTYKARMIKEDVWNKFGVKIS*YTAWHAKKKIMELVNGNYDESYAKTP*MCV 992
             + +R + + YK + I E++    G+ +S   AW  K++IM  V G+++E Y   P  C 
Sbjct: 272  EERLRENPE-YKPKEILEEIHKAHGITLSYKQAWRGKERIMAAVRGSFEEGYRLLPEYCR 330

Query: 991  QMLRRNPGSVARCSRNDGTLQFNHECISFSASIRGFVEGCRPIIGLDGCFLKGKYGGVCL 812
            Q+ R NPGS+AR   N     F    ISFSASI GFV  CRP+IGLD   LK KY G   
Sbjct: 331  QVERTNPGSIARVYGNPDDNCFRRLFISFSASIFGFVNACRPLIGLDRTLLKNKYLGTLF 390

Query: 811  SIVALDGN 788
                 DG+
Sbjct: 391  LATGFDGD 398



 Score = 26.9 bits (58), Expect(3) = 2e-54
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 1461 VGMEWSTLKSCRTYLRSYAIANRFVYKGLKNDGDR 1357
            VG ++  + SCR  +R+ AIA  F  + +K+D  R
Sbjct: 181  VGQQFPDVVSCRRAIRNTAIACHFEIQTVKSDKSR 215


>ref|XP_002442453.1| hypothetical protein SORBIDRAFT_08g020220 [Sorghum bicolor]
            gi|241943146|gb|EES16291.1| hypothetical protein
            SORBIDRAFT_08g020220 [Sorghum bicolor]
          Length = 759

 Score =  125 bits (313), Expect(3) = 5e-54
 Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 3/251 (1%)
 Frame = -2

Query: 777  LFPVAVFICRGKNKETWGTFLGIMHEYLSDHEQN---LTFMSDI*KGLKEVLPLIFPRAA 607
            LFP+A  +   +  E W  FL  +HE L  + +N   LT +SD  KG+ + +   FP A 
Sbjct: 401  LFPLAFGVVDEETDENWVWFLSELHELLEKNTENMPRLTILSDRRKGITDGVEFNFPTAF 460

Query: 606  HRFCFRHMYKNFKKEYKGGKLFEELCWGAARAYRLSDCNKILAGLEKHDKNAVEWLKKRD 427
            H +C RH+ + FKKE+    L   L W AA A  + +    L  +E     AV W++   
Sbjct: 461  HGYCMRHVSETFKKEFNNPVLVN-LLWEAAHALTVIEFETKLLEIEDTSSEAVVWIRHLP 519

Query: 426  VTTWCRSHFWSHTKSEHVTNNWSESFNN*IMDLRDKPLFTFVEELDLMLMTLMRKRRAKA 247
               W  ++F   T+  H+T N +ES N+ I+D    P+   +E +   LMT   +RR  +
Sbjct: 520  PRLWATAYF-EGTRYGHLTANITESLNSWILDASGLPIIQMMECIRRQLMTWFNERREAS 578

Query: 246  MELDINDVVPRVKAIHAKQEKYIQHYTYRSATDTYFTVFSSHGSRWLVNLDKQECECNVW 67
            M+ +   +VP  +    +  +  + Y    A +  F V S+H    +V++  + C C  W
Sbjct: 579  MQWN-TILVPAAERRVQEAIERARGYQVARANEAEFEVISAHEGTNIVDIRNRCCLCRGW 637

Query: 66   QINGIPCIHGL 34
            Q+ G+PC HG+
Sbjct: 638  QLYGVPCAHGV 648



 Score =  107 bits (266), Expect(3) = 5e-54
 Identities = 64/188 (34%), Positives = 92/188 (48%)
 Frame = -1

Query: 1351 SKCRGNECTWLFYAKVIKSKKSDGFTTRCNKYEGQHSGKCIGDSKFKNRLADAIWVAEKM 1172
            +KC    C W  +A  +    +    T        HS  C+G +   ++ A   WVA  +
Sbjct: 218  AKCAAEACPWRIHAAKLPGVPTFSIRT----IHDNHS--CVGINHLGHQQASVQWVANTV 271

Query: 1171 LDTVRTHHKTYKARMIKEDVWNKFGVKIS*YTAWHAKKKIMELVNGNYDESYAKTP*MCV 992
             + +R + +  K + I E++    G+ +S   AW  K++IM  V G+++E Y   P  C 
Sbjct: 272  EERLRENPQC-KPKEILEEIHKAHGITLSYKQAWRGKERIMAAVRGSFEEGYRLLPEYCR 330

Query: 991  QMLRRNPGSVARCSRNDGTLQFNHECISFSASIRGFVEGCRPIIGLDGCFLKGKYGGVCL 812
            Q+ R NPGS+AR   N     F    ISF+ASI GFV  CRP+IGLD   LK KY G   
Sbjct: 331  QVERTNPGSIARVYGNPDDNCFRRLFISFNASIFGFVNACRPLIGLDRTLLKNKYLGTLF 390

Query: 811  SIVALDGN 788
                 DG+
Sbjct: 391  LATGFDGD 398



 Score = 28.5 bits (62), Expect(3) = 5e-54
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 1461 VGMEWSTLKSCRTYLRSYAIANRFVYKGLKNDGDR 1357
            VG E+  + SCR  +R+ AIA  F  + +K+D  R
Sbjct: 181  VGQEFPDVMSCRRAIRNTAIACHFEIQTVKSDKSR 215


>ref|XP_002262784.1| PREDICTED: uncharacterized protein LOC100258751 [Vitis vinifera]
            gi|147858253|emb|CAN83921.1| hypothetical protein
            VITISV_011842 [Vitis vinifera]
          Length = 749

 Score =  116 bits (290), Expect(3) = 1e-51
 Identities = 74/251 (29%), Positives = 125/251 (49%), Gaps = 3/251 (1%)
 Frame = -2

Query: 777  LFPVAVFICRGKNKETWGTFLGIMHEYLSDHEQN---LTFMSDI*KGLKEVLPLIFPRAA 607
            LFP+A  +   +N E W  FL  +H  L  + +N   LT +SD  KG+ + +   FP A 
Sbjct: 397  LFPLAFGVVDEENDENWMWFLSELHNLLEVNTENMPRLTILSDRQKGIVDGVEANFPTAF 456

Query: 606  HRFCFRHMYKNFKKEYKGGKLFEELCWGAARAYRLSDCNKILAGLEKHDKNAVEWLKKRD 427
            H FC RH+  +F+KE+    L   L W AA A  + +    +  +E+  ++A  W+++  
Sbjct: 457  HGFCMRHLSDSFRKEFNNTMLV-NLLWEAAHALTVIEFEAKILEIEEISQDAAYWIRRIP 515

Query: 426  VTTWCRSHFWSHTKSEHVTNNWSESFNN*IMDLRDKPLFTFVEELDLMLMTLMRKRRAKA 247
               W  ++F   T+  H+T N  ES N  I++    P+   +E +   LMT   +RR  +
Sbjct: 516  PRLWATAYF-EGTRFGHLTANIVESLNTWILEASGLPIIQMMECIRRQLMTWFNERRETS 574

Query: 246  MELDINDVVPRVKAIHAKQEKYIQHYTYRSATDTYFTVFSSHGSRWLVNLDKQECECNVW 67
            M+   + +VP  +   A+  +  + Y    A +  F V S  G+  +V++  + C C  W
Sbjct: 575  MQW-TSILVPSAERRVAEALERARTYQVLRANEAEFEVISHEGTN-IVDIRNRCCLCRGW 632

Query: 66   QINGIPCIHGL 34
            Q+ G+PC H +
Sbjct: 633  QLYGLPCAHAV 643



 Score =  104 bits (260), Expect(3) = 1e-51
 Identities = 63/188 (33%), Positives = 92/188 (48%)
 Frame = -1

Query: 1351 SKCRGNECTWLFYAKVIKSKKSDGFTTRCNKYEGQHSGKCIGDSKFKNRLADAIWVAEKM 1172
            +KC  + C W  +A  +    +  FT R        +  C G +   ++ A   WVA  +
Sbjct: 214  AKCASDGCPWRIHAAKLPGVPT--FTIRTI----HEAHTCGGIAHLGHQQASVQWVANSV 267

Query: 1171 LDTVRTHHKTYKARMIKEDVWNKFGVKIS*YTAWHAKKKIMELVNGNYDESYAKTP*MCV 992
               +R  +  YK + I E++    G+ +S   AW  K++IM  + G+++E Y   P  C 
Sbjct: 268  EQRLR-ENPNYKPKEILEEIHRVHGITLSYKQAWRGKERIMAAMRGSFEEGYRLLPQYCD 326

Query: 991  QMLRRNPGSVARCSRNDGTLQFNHECISFSASIRGFVEGCRPIIGLDGCFLKGKYGGVCL 812
            Q+ R NPGS+A    N     F    ISF ASI GF+  CRP++GLD  FLK KY G  L
Sbjct: 327  QVKRTNPGSIASVYGNPTDNCFQRLFISFQASIYGFLNACRPLLGLDRTFLKSKYLGTLL 386

Query: 811  SIVALDGN 788
                 DG+
Sbjct: 387  FATGFDGD 394



 Score = 31.6 bits (70), Expect(3) = 1e-51
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -2

Query: 1470 EPYVGMEWSTLKSCRTYLRSYAIANRFVYKGLKNDGDR 1357
            E  VG E+  +KSCR  LR  AIA  F  + +K+D  R
Sbjct: 174  ELVVGQEFPDVKSCRRALRDTAIALHFEMQTIKSDKTR 211


>ref|XP_003568114.1| PREDICTED: uncharacterized protein LOC100835098 isoform 1
            [Brachypodium distachyon]
            gi|357132998|ref|XP_003568115.1| PREDICTED:
            uncharacterized protein LOC100835098 isoform 2
            [Brachypodium distachyon]
          Length = 748

 Score =  124 bits (311), Expect(2) = 3e-51
 Identities = 77/251 (30%), Positives = 125/251 (49%), Gaps = 3/251 (1%)
 Frame = -2

Query: 777  LFPVAVFICRGKNKETWGTFLGIMHEYLSDHEQN---LTFMSDI*KGLKEVLPLIFPRAA 607
            LFP+A  +   +N E W  FL  +HE L  + +N   LT +SD  KG+ + + + FP A 
Sbjct: 394  LFPLAFGVVDDENDENWIWFLSELHELLEKNTENMPRLTILSDRRKGIVDGVDINFPTAF 453

Query: 606  HRFCFRHMYKNFKKEYKGGKLFEELCWGAARAYRLSDCNKILAGLEKHDKNAVEWLKKRD 427
            H +C RH+ + F+KE+    L   L W AA     +D    L  +E   + AV W+++  
Sbjct: 454  HGYCMRHLSETFRKEFNNSVLVN-LLWEAASVLTATDFETKLLEIEDTSQEAVAWIREIP 512

Query: 426  VTTWCRSHFWSHTKSEHVTNNWSESFNN*IMDLRDKPLFTFVEELDLMLMTLMRKRRAKA 247
               W  + F+   +   +T N +ES N+ I+D    P+   +E L   LMT   +RR  +
Sbjct: 513  PRLWATA-FFDGPRYGQLTANITESLNSWILDASSLPINQMMECLRRQLMTWFNERREAS 571

Query: 246  MELDINDVVPRVKAIHAKQEKYIQHYTYRSATDTYFTVFSSHGSRWLVNLDKQECECNVW 67
            M+     +VP  +    +  +  Q+Y    A++  F V S H    +V++  + C C  W
Sbjct: 572  MQWT-TILVPTAERRVQEAIERAQNYRVARASEAEFEVISPHEGTNVVDIRNRVCLCRGW 630

Query: 66   QINGIPCIHGL 34
            Q+ G+PC HG+
Sbjct: 631  QLYGMPCAHGV 641



 Score =  106 bits (264), Expect(2) = 3e-51
 Identities = 63/188 (33%), Positives = 91/188 (48%)
 Frame = -1

Query: 1351 SKCRGNECTWLFYAKVIKSKKSDGFTTRCNKYEGQHSGKCIGDSKFKNRLADAIWVAEKM 1172
            +KC    C W  +A  +    +    T  + +       C+G +   ++ A   WVA  +
Sbjct: 211  AKCAAEGCPWRIHAAKLPGVPTFSIRTILDNHS------CVGINHLGHQQASVQWVASTV 264

Query: 1171 LDTVRTHHKTYKARMIKEDVWNKFGVKIS*YTAWHAKKKIMELVNGNYDESYAKTP*MCV 992
             + +R +    K + I E++    G+ +S   AW  K++IM  V G+++E Y   P  C 
Sbjct: 265  EERLRENPHC-KPKEILEEIHKSHGITLSYKQAWRGKERIMATVRGSFEEGYRLLPEYCR 323

Query: 991  QMLRRNPGSVARCSRNDGTLQFNHECISFSASIRGFVEGCRPIIGLDGCFLKGKYGGVCL 812
            Q+ R NPGS+AR   N     F    ISF ASI GFV  CRP+IGLD   LK KY G   
Sbjct: 324  QIERTNPGSIARIYGNPDDNCFRRLFISFYASIYGFVNACRPLIGLDKTTLKNKYLGTLF 383

Query: 811  SIVALDGN 788
               A DG+
Sbjct: 384  LATAFDGD 391


>ref|XP_003556476.1| PREDICTED: uncharacterized protein LOC100811471 isoform 1 [Glycine
            max] gi|356576718|ref|XP_003556477.1| PREDICTED:
            uncharacterized protein LOC100811471 isoform 2 [Glycine
            max]
          Length = 750

 Score =  118 bits (295), Expect(3) = 1e-50
 Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 3/251 (1%)
 Frame = -2

Query: 777  LFPVAVFICRGKNKETWGTFLGIMHEYLSDHEQN---LTFMSDI*KGLKEVLPLIFPRAA 607
            LFP+A  +   +N + W  FL  +H  L  H +N   LT +SD  KG+ + +   FP A 
Sbjct: 398  LFPLAFGVVDEENDDNWMWFLSELHNLLEIHTENMPRLTILSDRQKGIVDGVEANFPTAF 457

Query: 606  HRFCFRHMYKNFKKEYKGGKLFEELCWGAARAYRLSDCNKILAGLEKHDKNAVEWLKKRD 427
            H FC RH+  +F+KE+    L   L W AA A  + +    +  +E+  ++A  W+++  
Sbjct: 458  HGFCMRHLSDSFRKEFNNTMLV-NLLWEAANALTVIEFEAKILEIEEISQDAAYWIRRIP 516

Query: 426  VTTWCRSHFWSHTKSEHVTNNWSESFNN*IMDLRDKPLFTFVEELDLMLMTLMRKRRAKA 247
               W  ++F  H +  H+T N  ES N  I++    P+   +E +   LMT   +RR  +
Sbjct: 517  PRLWATAYFEGH-RFGHLTANIVESLNTWILEASGLPIIQMMECIRRQLMTWFNERRETS 575

Query: 246  MELDINDVVPRVKAIHAKQEKYIQHYTYRSATDTYFTVFSSHGSRWLVNLDKQECECNVW 67
            M+   + +VP  +   A+     + Y    A D  F V +  G+  +V++  + C C  W
Sbjct: 576  MQW-TSILVPSAERRVAEALDRARTYQVLRANDAEFEVITHEGTN-IVDIRNRCCLCRGW 633

Query: 66   QINGIPCIHGL 34
            Q+ G+PC H +
Sbjct: 634  QLYGLPCAHAV 644



 Score = 99.8 bits (247), Expect(3) = 1e-50
 Identities = 61/188 (32%), Positives = 90/188 (47%)
 Frame = -1

Query: 1351 SKCRGNECTWLFYAKVIKSKKSDGFTTRCNKYEGQHSGKCIGDSKFKNRLADAIWVAEKM 1172
            +KC    C W  +A  +    +  FT R        +  C G S   ++ A   WVA  +
Sbjct: 215  AKCASEGCPWRIHAAKLPGVPT--FTIRTI----HENHTCGGISHLGHQQASVQWVANSV 268

Query: 1171 LDTVRTHHKTYKARMIKEDVWNKFGVKIS*YTAWHAKKKIMELVNGNYDESYAKTP*MCV 992
               ++  +   K + I E++    G+ +S   AW  K++IM  + G+++E Y   P  C 
Sbjct: 269  EQRLK-ENPNCKPKEILEEIHRVHGITLSYKQAWRGKERIMAAMRGSFEEGYRLLPQYCE 327

Query: 991  QMLRRNPGSVARCSRNDGTLQFNHECISFSASIRGFVEGCRPIIGLDGCFLKGKYGGVCL 812
            Q+ R NPGS+A    N     F    ISF ASI GF+  CRP++GLD  +LK KY G  L
Sbjct: 328  QVKRTNPGSIASVYGNPADGCFQRLFISFQASIYGFLNPCRPLLGLDRTYLKSKYLGTLL 387

Query: 811  SIVALDGN 788
                 DG+
Sbjct: 388  LATGFDGD 395



 Score = 31.2 bits (69), Expect(3) = 1e-50
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 1461 VGMEWSTLKSCRTYLRSYAIANRFVYKGLKNDGDR 1357
            VG E+  +KSCR  LR  AIA  F  + +K+D  R
Sbjct: 178  VGQEFPDVKSCRRALRDTAIALHFEMQTIKSDKTR 212


Top