BLASTX nr result

ID: Coptis23_contig00014561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014561
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29824.3| unnamed protein product [Vitis vinifera]              147   6e-33
ref|XP_002284204.1| PREDICTED: ABC transporter A family member 1...   147   6e-33
emb|CAN66569.1| hypothetical protein VITISV_031181 [Vitis vinifera]   146   8e-33
ref|XP_003625137.1| ATP-binding cassette sub-family A member [Me...   144   4e-32
ref|XP_002529511.1| abc transporter, putative [Ricinus communis]...   141   3e-31

>emb|CBI29824.3| unnamed protein product [Vitis vinifera]
          Length = 2001

 Score =  147 bits (370), Expect = 6e-33
 Identities = 91/171 (53%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
 Frame = -1

Query: 509  QVGTEISFRLPLASSSSFESMFHEIESCMIKQTILETSRNNGVC-FGIESYGISVTTLEE 333
            +VGTEISF+LPL+SSSSFESMF EIESCM      + S N      GIESYGISVTTLEE
Sbjct: 810  EVGTEISFKLPLSSSSSFESMFREIESCMNSVHNSDRSGNEDKYNLGIESYGISVTTLEE 869

Query: 332  VFLRVARCDVEEIEHMEPDKDLVLPNSLDSNVQHYSQIKASYTKILYGYYRKVLGAVFTI 153
            VFLRVA CD +E E  + +K  VLP+S+ S        K  +     G Y K++G V TI
Sbjct: 870  VFLRVAGCDFDETECSKQEKLHVLPDSVVSQASPNHAPKQIFHSKPLGKY-KIIGVVSTI 928

Query: 152  VKRSFYLIFTMVFGLLGFVQGLCCS-SIIPRSTFWEYFKALLIKKAISARR 3
            V+R+  LIF  V   + F    CCS   I +S FWE+ KALLIK+AI ARR
Sbjct: 929  VERACSLIFAAVLSFINFFSVQCCSCCFISKSIFWEHSKALLIKRAIIARR 979


>ref|XP_002284204.1| PREDICTED: ABC transporter A family member 1-like [Vitis vinifera]
          Length = 1881

 Score =  147 bits (370), Expect = 6e-33
 Identities = 91/171 (53%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
 Frame = -1

Query: 509  QVGTEISFRLPLASSSSFESMFHEIESCMIKQTILETSRNNGVC-FGIESYGISVTTLEE 333
            +VGTEISF+LPL+SSSSFESMF EIESCM      + S N      GIESYGISVTTLEE
Sbjct: 810  EVGTEISFKLPLSSSSSFESMFREIESCMNSVHNSDRSGNEDKYNLGIESYGISVTTLEE 869

Query: 332  VFLRVARCDVEEIEHMEPDKDLVLPNSLDSNVQHYSQIKASYTKILYGYYRKVLGAVFTI 153
            VFLRVA CD +E E  + +K  VLP+S+ S        K  +     G Y K++G V TI
Sbjct: 870  VFLRVAGCDFDETECSKQEKLHVLPDSVVSQASPNHAPKQIFHSKPLGKY-KIIGVVSTI 928

Query: 152  VKRSFYLIFTMVFGLLGFVQGLCCS-SIIPRSTFWEYFKALLIKKAISARR 3
            V+R+  LIF  V   + F    CCS   I +S FWE+ KALLIK+AI ARR
Sbjct: 929  VERACSLIFAAVLSFINFFSVQCCSCCFISKSIFWEHSKALLIKRAIIARR 979


>emb|CAN66569.1| hypothetical protein VITISV_031181 [Vitis vinifera]
          Length = 1206

 Score =  146 bits (369), Expect = 8e-33
 Identities = 91/172 (52%), Positives = 114/172 (66%), Gaps = 3/172 (1%)
 Frame = -1

Query: 509  QVGTEISFRLPLASSSSFESMFHEIESCMIKQTILETSRNNGVC-FGIESYGISVTTLEE 333
            +VGTEISF+LPL+SSSSFESMF EIESCM      + S N      GIESYGISVTTLEE
Sbjct: 798  EVGTEISFKLPLSSSSSFESMFREIESCMNSVHNSDRSGNEDKYNLGIESYGISVTTLEE 857

Query: 332  VFLRVARCDVEEIEHMEPDKDLVLPNSLDSNVQ-HYSQIKASYTKILYGYYRKVLGAVFT 156
            VFLRVA CD +E E  + +K  VLP+S+ S    +++  +  ++K L  Y  K++G V T
Sbjct: 858  VFLRVAGCDFDETECSKQEKLHVLPDSVVSQASPNHAPKQIFHSKPLRKY--KIIGVVST 915

Query: 155  IVKRSFYLIFTMVFGLLGFVQGLCCS-SIIPRSTFWEYFKALLIKKAISARR 3
            IV+R+  LIF  V   + F    CCS   I +S FWE+ KALLIK+AI ARR
Sbjct: 916  IVERACSLIFAAVLSFINFFSVQCCSCCFISKSIFWEHSKALLIKRAIIARR 967


>ref|XP_003625137.1| ATP-binding cassette sub-family A member [Medicago truncatula]
            gi|355500152|gb|AES81355.1| ATP-binding cassette
            sub-family A member [Medicago truncatula]
          Length = 2142

 Score =  144 bits (363), Expect = 4e-32
 Identities = 92/175 (52%), Positives = 115/175 (65%), Gaps = 6/175 (3%)
 Frame = -1

Query: 509  QVGTEISFRLPLASSSSFESMFHEIESCMIKQ-TILETSRN-NGVCFGIESYGISVTTLE 336
            +VGTEISFRLP+ASSS+FE MF EIESCM K  + +E S N      GIESYGISVTTLE
Sbjct: 1055 EVGTEISFRLPMASSSTFERMFREIESCMKKPVSSMEISGNCEKDSHGIESYGISVTTLE 1114

Query: 335  EVFLRVARCDVEEIEHMEPDKDLVLPN---SLDSNVQHYSQIKASYTKILYGYYRKVLGA 165
            EVFLRVA CD +E E  E +   ++     SL SN +     K  Y K+  G Y+K+LG 
Sbjct: 1115 EVFLRVAGCDYDEDECFEENNRSLISEAVVSLPSNDR--PSTKICYYKVC-GNYKKILGF 1171

Query: 164  VFTIVKRSFYLIFTMVFGLLGFVQGLCCS-SIIPRSTFWEYFKALLIKKAISARR 3
            + T+V R+  LIF  V   + F+   CCS  +I  STFW++ KAL+IK+AISARR
Sbjct: 1172 MSTMVGRACGLIFATVISFVNFISLQCCSCCLITTSTFWQHSKALIIKRAISARR 1226


>ref|XP_002529511.1| abc transporter, putative [Ricinus communis]
            gi|223531027|gb|EEF32880.1| abc transporter, putative
            [Ricinus communis]
          Length = 1722

 Score =  141 bits (355), Expect = 3e-31
 Identities = 83/176 (47%), Positives = 113/176 (64%), Gaps = 7/176 (3%)
 Frame = -1

Query: 509  QVGTEISFRLPLASSSSFESMFHEIESCMIK-----QTILETSRNNGVCFGIESYGISVT 345
            +VGTE+SF+LPLASSS+FE+MF EIESCM       QT +   +N     GIESYGISVT
Sbjct: 699  EVGTEVSFKLPLASSSAFENMFREIESCMRNAVSNSQTNIMEEKNY---IGIESYGISVT 755

Query: 344  TLEEVFLRVARCDVEEIEHMEPDKDLVLPNSLDSNVQHYSQIKASYTKILYGYYRKVLGA 165
            TLEEVFLRVA CD +E +  +   +++  + +     +++  K   +K+L G YRK++  
Sbjct: 756  TLEEVFLRVAGCDCDETDGFKQSSNILSSDFMIPTAHNHAPEKILDSKML-GNYRKIISV 814

Query: 164  VFTIVKRSFYLIFTMVFGLLGF--VQGLCCSSIIPRSTFWEYFKALLIKKAISARR 3
            +  IV R+  L+      L+ F  +Q  CC  II RSTFW++ KAL IK+AISARR
Sbjct: 815  ISAIVGRACGLMVATFLSLINFLGMQCCCCCCIISRSTFWQHTKALFIKRAISARR 870


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