BLASTX nr result

ID: Coptis23_contig00014556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014556
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   260   6e-67
ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-66
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   256   9e-66
emb|CBI40380.3| unnamed protein product [Vitis vinifera]              256   9e-66
ref|XP_002320796.1| predicted protein [Populus trichocarpa] gi|2...   253   1e-64

>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
            putative [Ricinus communis]
          Length = 2264

 Score =  260 bits (664), Expect = 6e-67
 Identities = 148/266 (55%), Positives = 182/266 (68%), Gaps = 4/266 (1%)
 Frame = -1

Query: 1194 PIIYADREPYGKNMRHMLASVILRLLGSRLVYEDVDFSFSPMQSSIKRLD---SMMDTSV 1024
            P+I  D EP G+NMRHMLA VILRLLG+R+V+ED D SF PM+SS  +++   ++   S 
Sbjct: 2002 PVICTDGEPSGRNMRHMLACVILRLLGNRVVHEDADLSFYPMKSSQSKVEVESTLEVAST 2061

Query: 1023 NLFGESLFDQLLSVLYGLLSSWKPRWLKPKSASKSTVKSQRDFSVFDREVVDSLQSELDR 844
            +  GESLFD+LL VL+GLLSS +P WLK +SASK   +  +D S  DRE+V++LQ++LDR
Sbjct: 2062 DSPGESLFDRLLLVLHGLLSSSQPSWLKSRSASKLMNEFSKDSSGIDRELVETLQNDLDR 2121

Query: 843  MQLPETIRWRLQAAMPVLPRFPSFSISCQPPXXXXXXXXXXXXXXXIPGLQHGYLNQSQR 664
            MQLP +IRWR+QAAMPVL     +SISCQ P               I GL  G     Q+
Sbjct: 2122 MQLPGSIRWRIQAAMPVLLPSARWSISCQLPTVPIAAVASLQPSITISGLYAGM--PPQK 2179

Query: 663  NTTPLGRVGANTLGKSKPLSL-LDQEMEVDPWTLLEDGTGSGPSTSNNNVGVTGDQTNLK 487
            N  PL R   N  G+SK L L  D +ME+DPWTLLEDGTGSGPS+SN  V   GD  NL+
Sbjct: 2180 NPLPLART-TNVPGRSKSLPLQQDNDMEIDPWTLLEDGTGSGPSSSNAAVVSGGDHANLR 2238

Query: 486  ACYWLKGAVRIRRTDLTYTGAVDDDS 409
            A  WLKGAVR+RRTDLTY GAVDDD+
Sbjct: 2239 ASAWLKGAVRVRRTDLTYIGAVDDDN 2264


>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
            predicted protein [Populus trichocarpa]
          Length = 2219

 Score =  258 bits (658), Expect = 3e-66
 Identities = 148/272 (54%), Positives = 187/272 (68%), Gaps = 10/272 (3%)
 Frame = -1

Query: 1194 PIIYADREPYGKNMRHMLASVILRLLGSRLVYEDVDFSFSPMQS--SIKRLDSMMDT-SV 1024
            P I  + EP G+NMRH+LASVILRLLGSR+V+ED + SF P+QS  S   L+S ++  S 
Sbjct: 1950 PTICTNGEPSGRNMRHVLASVILRLLGSRVVHEDAELSFYPLQSFQSKGELESPLEAASA 2009

Query: 1023 NLFGESLFDQLLSVLYGLLSSWKPRWLKPK--SASKSTVKSQRDFSVFDREVVDSLQSEL 850
            +L GESLFD+LL VL+GLLSS +P WLKP+  S+SKS  +S +D + FDR++V+SLQ++L
Sbjct: 2010 DLSGESLFDRLLLVLHGLLSSSRPSWLKPRPASSSKSVNESSKDCAGFDRDLVESLQNDL 2069

Query: 849  DRMQLPETIRWRLQAAMPVLPRFPSFSISCQPPXXXXXXXXXXXXXXXIPGLQHGYLNQS 670
            DRM+LP + R R+QAAMP+L       +SCQPP               I G+ +G  N S
Sbjct: 2070 DRMKLPGSTRLRIQAAMPILLPSVRCFVSCQPPPVPTAAAASLQPSIAISGVLNG--NNS 2127

Query: 669  QRNTTPLGRVGANTLGKSKPLSL-----LDQEMEVDPWTLLEDGTGSGPSTSNNNVGVTG 505
            Q+N  PL R   N   KSKPL L     LD +ME+DPWTLLEDGTGS  S+SN +V  + 
Sbjct: 2128 QKNPAPLARSANNISTKSKPLPLPLPLQLDNDMEIDPWTLLEDGTGSSLSSSNTSVIGSS 2187

Query: 504  DQTNLKACYWLKGAVRIRRTDLTYTGAVDDDS 409
            D  NL+A  WLKGAVR+RRTDLTY GAVDDDS
Sbjct: 2188 DHANLRASSWLKGAVRVRRTDLTYIGAVDDDS 2219


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  256 bits (654), Expect = 9e-66
 Identities = 146/268 (54%), Positives = 181/268 (67%), Gaps = 6/268 (2%)
 Frame = -1

Query: 1194 PIIYADREPYGKNMRHMLASVILRLLGSRLVYEDVDFSFSPMQS--SIKRLDSMMDTS-- 1027
            PII A+ E   +NMR  LASVILRLLGSR+V+ED D S    QS  S +  +S+M+ S  
Sbjct: 2010 PIICAEGEQ-SRNMRQSLASVILRLLGSRVVHEDADLSLYSTQSPPSKREAESLMEASTA 2068

Query: 1026 --VNLFGESLFDQLLSVLYGLLSSWKPRWLKPKSASKSTVKSQRDFSVFDREVVDSLQSE 853
              ++L GESLFD+LL VL+GLLSS +P WLK KSASKST +S ++FS FDRE  ++LQ++
Sbjct: 2069 ASLDLSGESLFDRLLLVLHGLLSSCQPSWLKSKSASKSTTESIKEFSGFDREAAENLQND 2128

Query: 852  LDRMQLPETIRWRLQAAMPVLPRFPSFSISCQPPXXXXXXXXXXXXXXXIPGLQHGYLNQ 673
            LD MQLP+TIRWR+QAAMP+L      SISCQPP                P    G  NQ
Sbjct: 2129 LDCMQLPDTIRWRIQAAMPILVPSGRCSISCQPPSVSSAAVASLQPSLSFPAFHPGNTNQ 2188

Query: 672  SQRNTTPLGRVGANTLGKSKPLSLLDQEMEVDPWTLLEDGTGSGPSTSNNNVGVTGDQTN 493
            SQRN++ L R G     K+ PL   D ++E+DPWTLLEDG G+GPS+ N  V  +GD  N
Sbjct: 2189 SQRNSSSLVRPGKL---KNMPLQ-QDHDIEIDPWTLLEDGAGAGPSSGNTAVIGSGDHAN 2244

Query: 492  LKACYWLKGAVRIRRTDLTYTGAVDDDS 409
            L+A  WL+G VR+RRTDLTY GAVDDDS
Sbjct: 2245 LRASSWLRGTVRVRRTDLTYIGAVDDDS 2272


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score =  256 bits (654), Expect = 9e-66
 Identities = 146/268 (54%), Positives = 181/268 (67%), Gaps = 6/268 (2%)
 Frame = -1

Query: 1194 PIIYADREPYGKNMRHMLASVILRLLGSRLVYEDVDFSFSPMQS--SIKRLDSMMDTS-- 1027
            PII A+ E   +NMR  LASVILRLLGSR+V+ED D S    QS  S +  +S+M+ S  
Sbjct: 1775 PIICAEGEQ-SRNMRQSLASVILRLLGSRVVHEDADLSLYSTQSPPSKREAESLMEASTA 1833

Query: 1026 --VNLFGESLFDQLLSVLYGLLSSWKPRWLKPKSASKSTVKSQRDFSVFDREVVDSLQSE 853
              ++L GESLFD+LL VL+GLLSS +P WLK KSASKST +S ++FS FDRE  ++LQ++
Sbjct: 1834 ASLDLSGESLFDRLLLVLHGLLSSCQPSWLKSKSASKSTTESIKEFSGFDREAAENLQND 1893

Query: 852  LDRMQLPETIRWRLQAAMPVLPRFPSFSISCQPPXXXXXXXXXXXXXXXIPGLQHGYLNQ 673
            LD MQLP+TIRWR+QAAMP+L      SISCQPP                P    G  NQ
Sbjct: 1894 LDCMQLPDTIRWRIQAAMPILVPSGRCSISCQPPSVSSAAVASLQPSLSFPAFHPGNTNQ 1953

Query: 672  SQRNTTPLGRVGANTLGKSKPLSLLDQEMEVDPWTLLEDGTGSGPSTSNNNVGVTGDQTN 493
            SQRN++ L R G     K+ PL   D ++E+DPWTLLEDG G+GPS+ N  V  +GD  N
Sbjct: 1954 SQRNSSSLVRPGKL---KNMPLQ-QDHDIEIDPWTLLEDGAGAGPSSGNTAVIGSGDHAN 2009

Query: 492  LKACYWLKGAVRIRRTDLTYTGAVDDDS 409
            L+A  WL+G VR+RRTDLTY GAVDDDS
Sbjct: 2010 LRASSWLRGTVRVRRTDLTYIGAVDDDS 2037


>ref|XP_002320796.1| predicted protein [Populus trichocarpa] gi|222861569|gb|EEE99111.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  253 bits (645), Expect = 1e-64
 Identities = 147/267 (55%), Positives = 182/267 (68%), Gaps = 5/267 (1%)
 Frame = -1

Query: 1194 PIIYADREPYGKNMRHMLASVILRLLGSRLVYEDVDFSFSPMQS--SIKRLDSMMDT-SV 1024
            P I  D EP G+NMR MLASVILRLLGSR+V+ED + SF P+QS  S + L+  ++  S 
Sbjct: 103  PTICTDGEPSGRNMRQMLASVILRLLGSRVVHEDAELSFYPLQSFQSKRELELQLEAASA 162

Query: 1023 NLFGESLFDQLLSVLYGLLSSWKPRWLKPKSASKS-TVKSQRDFSVFDREVVDSLQSELD 847
            +L G SLFD+LL +L+GLLSS  P WLK +SAS S  V   +DF+ FDRE+V+SLQ++LD
Sbjct: 163  DLSGGSLFDRLLLILHGLLSSSWPSWLKSRSASSSKAVNEFKDFAGFDRELVESLQNDLD 222

Query: 846  RMQLPETIRWRLQAAMPVLPRFPSFSISCQPPXXXXXXXXXXXXXXXIPGLQHGYLNQSQ 667
            RMQLP  I+ R+Q+AMP+L       ISCQPP               I G  +G  + +Q
Sbjct: 223  RMQLPGKIQLRIQSAMPILLPSVRCLISCQPPPVPTAAVASLQPSIAISGFYNG--SNAQ 280

Query: 666  RNTTPLGRVGANTLGKSKPLSLL-DQEMEVDPWTLLEDGTGSGPSTSNNNVGVTGDQTNL 490
            +N  PL R   N   KSKPL L  D +ME+DPWTLLEDGTGSGPS+SN +V  + D  NL
Sbjct: 281  KNPAPLARSANNISTKSKPLPLQQDGDMEIDPWTLLEDGTGSGPSSSNISVIGSIDHANL 340

Query: 489  KACYWLKGAVRIRRTDLTYTGAVDDDS 409
            +A  WLKGAVR+RRTDLTY GAVDDDS
Sbjct: 341  RASSWLKGAVRVRRTDLTYIGAVDDDS 367


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