BLASTX nr result
ID: Coptis23_contig00014529
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014529
(797 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277627.2| PREDICTED: uncharacterized protein LOC100266... 100 6e-40
ref|XP_002518953.1| ubiquitin-protein ligase, putative [Ricinus ... 103 2e-39
ref|XP_002317039.1| predicted protein [Populus trichocarpa] gi|1... 104 2e-38
ref|XP_002880184.1| hypothetical protein ARALYDRAFT_483690 [Arab... 98 2e-38
ref|NP_566045.1| RING/U-box domain-containing protein [Arabidops... 97 2e-38
>ref|XP_002277627.2| PREDICTED: uncharacterized protein LOC100266798 [Vitis vinifera]
gi|297742479|emb|CBI34628.3| unnamed protein product
[Vitis vinifera]
Length = 235
Score = 100 bits (250), Expect(2) = 6e-40
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = -2
Query: 796 SGNLECRVCQQQAEEVLIDLGCHCRGGLAKAHRSCIDTWFLSRGSNKCEICQQVAINV 623
S + +CRVCQQ+ EE LIDLGC CRGGLAK+HR+CIDTWF ++GSNKCEICQQVA NV
Sbjct: 63 SSHDQCRVCQQEKEEDLIDLGCQCRGGLAKSHRTCIDTWFHTKGSNKCEICQQVASNV 120
Score = 90.1 bits (222), Expect(2) = 6e-40
Identities = 47/93 (50%), Positives = 52/93 (55%)
Frame = -1
Query: 518 PETQPSRNYWVWRVDPAFRGPSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXSA 339
PE+QPS NYWVWRVDP FRG + E+ RGC+ PLWVA SA
Sbjct: 123 PESQPSANYWVWRVDPNFRGSNIAQEQARGCFKPLWVALSILIGGLLLDVLISIVLGVSA 182
Query: 338 LPVNXXXXXXXXXXXGTALRLALECCHELSLRR 240
LPVN GTA+RLALE CHE SLRR
Sbjct: 183 LPVNIIIGVIVVLGLGTAIRLALEFCHEWSLRR 215
>ref|XP_002518953.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223541940|gb|EEF43486.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 247
Score = 103 bits (258), Expect(2) = 2e-39
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = -2
Query: 796 SGNLECRVCQQQAEEVLIDLGCHCRGGLAKAHRSCIDTWFLSRGSNKCEICQQVAINV 623
S + +CRVCQQ+ EE+LI+LGC C+GGLAKAHRSCIDTWF +RGSNKCEICQ+VA+NV
Sbjct: 82 SSHDQCRVCQQEKEEILINLGCKCKGGLAKAHRSCIDTWFHTRGSNKCEICQEVAVNV 139
Score = 85.5 bits (210), Expect(2) = 2e-39
Identities = 48/93 (51%), Positives = 51/93 (54%)
Frame = -1
Query: 518 PETQPSRNYWVWRVDPAFRGPSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXSA 339
PE+QPS NYWVWRVDP FR + ERGC+SPLWVAF SA
Sbjct: 142 PESQPSTNYWVWRVDPTFR----PRDPERGCFSPLWVAFSILIGGLLLDVLISITLGVSA 197
Query: 338 LPVNXXXXXXXXXXXGTALRLALECCHELSLRR 240
LPVN GTALRLALE CHE S RR
Sbjct: 198 LPVNIIIGVIVVLGLGTALRLALEFCHEWSFRR 230
>ref|XP_002317039.1| predicted protein [Populus trichocarpa] gi|118484049|gb|ABK93910.1|
unknown [Populus trichocarpa]
gi|222860104|gb|EEE97651.1| predicted protein [Populus
trichocarpa]
Length = 253
Score = 104 bits (260), Expect(2) = 2e-38
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = -2
Query: 796 SGNLECRVCQQQAEEVLIDLGCHCRGGLAKAHRSCIDTWFLSRGSNKCEICQQVAINV 623
S + +CRVCQQ+ EEVLIDLGC C+GGLAKAHR+CIDTWF +RGSNKCEICQ VA+NV
Sbjct: 87 SSHEQCRVCQQEKEEVLIDLGCKCKGGLAKAHRTCIDTWFSTRGSNKCEICQAVAVNV 144
Score = 81.3 bits (199), Expect(2) = 2e-38
Identities = 47/95 (49%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = -1
Query: 518 PETQPSR-NYWVWRVDPAFRGPSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXS 342
PE+QP + NYWVWR+DP FR +R+RGC+SPLWVAF S
Sbjct: 147 PESQPIQANYWVWRIDPNFR----PRDRDRGCFSPLWVAFSILIGGLLLDVLISITLGVS 202
Query: 341 ALPVNXXXXXXXXXXXGTALRLALECCHELSLRRA 237
ALPVN GTALRLALE CHE S RRA
Sbjct: 203 ALPVNIIIGVIVVLGLGTALRLALEFCHEWSFRRA 237
>ref|XP_002880184.1| hypothetical protein ARALYDRAFT_483690 [Arabidopsis lyrata subsp.
lyrata] gi|297326023|gb|EFH56443.1| hypothetical protein
ARALYDRAFT_483690 [Arabidopsis lyrata subsp. lyrata]
Length = 240
Score = 97.8 bits (242), Expect(2) = 2e-38
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -2
Query: 796 SGNLECRVCQQQAEEVLIDLGCHCRGGLAKAHRSCIDTWFLSRGSNKCEICQQVAINV 623
S + +CRVC Q+ EEVLI+LGC CRGGLAKAHRSCID WF ++GSN+CEICQ VA+N+
Sbjct: 69 SSHEQCRVCLQEKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQVVAVNI 126
Score = 88.2 bits (217), Expect(2) = 2e-38
Identities = 48/94 (51%), Positives = 54/94 (57%)
Frame = -1
Query: 518 PETQPSRNYWVWRVDPAFRGPSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXSA 339
PETQP+ NYWVWR+DP++R ERERGC+SPLWVAF SA
Sbjct: 129 PETQPTTNYWVWRIDPSYR----QEERERGCFSPLWVAFSILIGGLMLDVLISITLGVSA 184
Query: 338 LPVNXXXXXXXXXXXGTALRLALECCHELSLRRA 237
LPVN GTALRL LE C+E SLRRA
Sbjct: 185 LPVNIIIGVIVVLGLGTALRLTLEFCYEWSLRRA 218
>ref|NP_566045.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|2979545|gb|AAC06154.1| expressed protein [Arabidopsis
thaliana] gi|27311551|gb|AAO00741.1| Unknown protein
[Arabidopsis thaliana] gi|30023706|gb|AAP13386.1|
At2g45530 [Arabidopsis thaliana]
gi|330255472|gb|AEC10566.1| RING/U-box domain-containing
protein [Arabidopsis thaliana]
Length = 240
Score = 97.4 bits (241), Expect(2) = 2e-38
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = -2
Query: 796 SGNLECRVCQQQAEEVLIDLGCHCRGGLAKAHRSCIDTWFLSRGSNKCEICQQVAINV 623
S + +CRVC Q EEVLI+LGC CRGGLAKAHRSCID WF ++GSN+CEICQ VA+NV
Sbjct: 69 SSHEQCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQVVAVNV 126
Score = 88.2 bits (217), Expect(2) = 2e-38
Identities = 48/94 (51%), Positives = 54/94 (57%)
Frame = -1
Query: 518 PETQPSRNYWVWRVDPAFRGPSTTPERERGCYSPLWVAFXXXXXXXXXXXXXXXXXXXSA 339
PETQP+ NYWVWR+DP++R ERERGC+SPLWVAF SA
Sbjct: 129 PETQPTTNYWVWRIDPSYR----QEERERGCFSPLWVAFSILIGGLMLDVLISITLGVSA 184
Query: 338 LPVNXXXXXXXXXXXGTALRLALECCHELSLRRA 237
LPVN GTALRL LE C+E SLRRA
Sbjct: 185 LPVNIIIGVIVVLGLGTALRLTLEFCYEWSLRRA 218