BLASTX nr result

ID: Coptis23_contig00014521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014521
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515331.1| conserved hypothetical protein [Ricinus comm...   112   5e-23
ref|XP_003518929.1| PREDICTED: uncharacterized protein LOC100798...   111   1e-22
ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22
ref|XP_003535999.1| PREDICTED: uncharacterized protein LOC100806...   107   3e-21
ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20

>ref|XP_002515331.1| conserved hypothetical protein [Ricinus communis]
           gi|223545811|gb|EEF47315.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score =  112 bits (281), Expect = 5e-23
 Identities = 68/145 (46%), Positives = 84/145 (57%), Gaps = 7/145 (4%)
 Frame = +1

Query: 205 MEGVYTNIYKGIKRYWNRKNYQRLNGSGSRRQ-NRVELAGLGA-----NXXXXXFWRIKI 366
           MEGV  ++Y  I+ YW R+ YQRLN SG RR+ N VEL G  A     +      WRIKI
Sbjct: 1   MEGVSASMYTKIRSYWRRRGYQRLNESGRRRRMNTVELGGGSATTTRGSRRRKMSWRIKI 60

Query: 367 TPKLRILSFSSAKKLLIRLRDSYVNMMIGVANXXXXXXXXXXXXXXXXXXXXXXIRRDPL 546
            PKL+I   +S KK  + LRD+YVNMM+G AN                        + PL
Sbjct: 61  KPKLKIFKRASPKKFFVWLRDAYVNMMLGFAN-----SRVIGPGYGGGGGIATNFGKGPL 115

Query: 547 KEYDEKVIVEIYKSLMK-QGQLVPH 618
           KEYDEK+I++IYKSL+  QGQLVPH
Sbjct: 116 KEYDEKMIIQIYKSLVAGQGQLVPH 140


>ref|XP_003518929.1| PREDICTED: uncharacterized protein LOC100798623 [Glycine max]
          Length = 152

 Score =  111 bits (278), Expect = 1e-22
 Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
 Frame = +1

Query: 205 MEGVYTNIYKGIKRYWNRKNYQRLNGSGSRRQNRVELAGLGANXXXXXFWRIKITPKLRI 384
           MEG+  ++ +G+K YW RK Y+RLNGSG RR+NRVEL            WRI++ PK+RI
Sbjct: 1   MEGITASVCRGVKEYWRRKGYKRLNGSGRRRRNRVELGSTRTGKGRFWRWRIRLAPKIRI 60

Query: 385 LSFSSAKKLLIRLRDSYVNMMIGVAN----XXXXXXXXXXXXXXXXXXXXXXIRRDPLKE 552
               S KK+++ +RD+YV MM+G+AN                            R P KE
Sbjct: 61  RKIPSPKKMVLWVRDAYVRMMLGLANSRIMTVSASASGFGGTLAGADTSFAGFGRAPPKE 120

Query: 553 YDEKVIVEIYKSLMKQ--GQLVP 615
           YDEK I++IYKSL+    G LVP
Sbjct: 121 YDEKTIIQIYKSLLMAHGGPLVP 143


>ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|222861096|gb|EEE98638.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  110 bits (274), Expect = 3e-22
 Identities = 65/141 (46%), Positives = 85/141 (60%), Gaps = 3/141 (2%)
 Frame = +1

Query: 205 MEGVYTNIYKGIKRYWNRKNYQRLNGSGS-RRQNRVEL-AGLGANXXXXXFWRIKITPKL 378
           MEG+  ++Y  +K YW+R+ Y+R+NGSG  RR+  VEL +G   +       RIKI PKL
Sbjct: 1   MEGISASMYTKMKGYWSRRGYERINGSGRIRRKRPVELGSGSSTSRGRGFSLRIKIKPKL 60

Query: 379 RILSFSSAKKLLIRLRDSYVNMMIGVANXXXXXXXXXXXXXXXXXXXXXXIRRDPLKEYD 558
           +IL  SS +K  + LRD+YV MM+G+AN                        R P+KEYD
Sbjct: 61  KILKMSSPRKFFVWLRDAYVKMMLGLANSRAIGTSGYGDAFG---------ARRPIKEYD 111

Query: 559 EKVIVEIYKSL-MKQGQLVPH 618
           EK+IV+IYKSL M QGQLVPH
Sbjct: 112 EKMIVQIYKSLVMTQGQLVPH 132


>ref|XP_003535999.1| PREDICTED: uncharacterized protein LOC100806979 [Glycine max]
          Length = 153

 Score =  107 bits (266), Expect = 3e-21
 Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
 Frame = +1

Query: 205 MEGVYTNIYKGIKRYWNRKNYQRLNGSGSRRQNRVELAGLGANXXXXXFWRIKITPKLRI 384
           MEG+  ++ +G+K YW RK Y++LNGSG RR+NRVEL            WRI++ PK+RI
Sbjct: 1   MEGITASVCRGVKDYWRRKGYKKLNGSGRRRRNRVELGSTRTGKGRFWRWRIRLAPKIRI 60

Query: 385 LSFSSAKKLLIRLRDSYVNMMIGVANXXXXXXXXXXXXXXXXXXXXXXIRRD------PL 546
               S KK+L+ +RD+YV MM+G+AN                                P 
Sbjct: 61  RKIPSPKKMLLWVRDAYVRMMLGLANSRVMTVNAASASGFGGALSGVGTSLGTGFGLAPP 120

Query: 547 KEYDEKVIVEIYKS-LMKQGQLV 612
           KEYDEK I++IYKS LM  G LV
Sbjct: 121 KEYDEKTIIQIYKSLLMAHGPLV 143


>ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|222844467|gb|EEE82014.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  105 bits (261), Expect = 1e-20
 Identities = 62/141 (43%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
 Frame = +1

Query: 205 MEGVYTNIYKGIKRYWNRKNYQRLNGSG-SRRQNRVELAGLG--ANXXXXXFWRIKITPK 375
           MEGV   I+  +K YW+R+ Y+R+NGSG +RR   VE+  +   +       WRIK+ PK
Sbjct: 1   MEGVSARIFTKMKEYWSRRGYERINGSGRTRRSWPVEVGSVSTTSRRRRRFAWRIKVKPK 60

Query: 376 LRILSFSSAKKLLIRLRDSYVNMMIGVANXXXXXXXXXXXXXXXXXXXXXXIRRDPLKEY 555
           L+ L  SS K+  + LRD+YV MM+G AN                      I   P+KEY
Sbjct: 61  LKALKMSSPKRFFVWLRDAYVKMMLGFAN----------SRARGTAGYGDGIGARPIKEY 110

Query: 556 DEKVIVEIYKSL-MKQGQLVP 615
           DEK+I+EIYKSL M QGQLVP
Sbjct: 111 DEKMIIEIYKSLVMAQGQLVP 131


Top