BLASTX nr result

ID: Coptis23_contig00014520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014520
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sag...   191   7e-47
gb|ADE22269.1| MYB transcription factor [Malus x domestica]           176   1e-42
ref|XP_002525595.1| DNA binding protein, putative [Ricinus commu...   174   9e-42
emb|CBI30422.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002278729.1| PREDICTED: uncharacterized protein LOC100263...   173   1e-41

>gb|AFH03060.1| R2R3-MYB transcription factor MYB8 [Epimedium sagittatum]
          Length = 298

 Score =  191 bits (484), Expect = 7e-47
 Identities = 94/126 (74%), Positives = 103/126 (81%)
 Frame = -2

Query: 378 RWQKVAAMIPGKSVDDVRNQYDELLNDVSDIEAGLIPIPGYTTSSFTLDWANNRTFGQSY 199
           RWQKVA MIPGK+V DV  QY EL +DVSDIEAGL+PIPGYTTS FTLDW NN+TFGQS+
Sbjct: 47  RWQKVAEMIPGKTVSDVIKQYKELEDDVSDIEAGLVPIPGYTTS-FTLDWMNNQTFGQSF 105

Query: 198 DSCGKRGSSARPSDQERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPTQVA 19
           D+ GKR SS RP++QERKKGVPWTE+EH            GDWRNISRNFVITRTPTQVA
Sbjct: 106 DANGKRSSSGRPTEQERKKGVPWTEDEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVA 165

Query: 18  SHAQKY 1
           SHAQKY
Sbjct: 166 SHAQKY 171


>gb|ADE22269.1| MYB transcription factor [Malus x domestica]
          Length = 304

 Score =  176 bits (447), Expect = 1e-42
 Identities = 89/129 (68%), Positives = 98/129 (75%), Gaps = 3/129 (2%)
 Frame = -2

Query: 378 RWQKVAAMIPGKSVDDVRNQYDELLNDVSDIEAGLIPIPGYTTSSFTLDWANNRTFG--- 208
           RW +VAAMIPGK+V DV  QY EL  DVSDIEAGLIPIPGYT+++FT++W NN+ F    
Sbjct: 49  RWLRVAAMIPGKTVGDVIKQYKELEEDVSDIEAGLIPIPGYTSNNFTMEWVNNQGFDGLE 108

Query: 207 QSYDSCGKRGSSARPSDQERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPT 28
           Q Y   GKR SS RP+DQERKKGVPWTEEEH            GDWRNISRNFVITRTPT
Sbjct: 109 QFYSVGGKRSSSTRPADQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVITRTPT 168

Query: 27  QVASHAQKY 1
           QVASHAQKY
Sbjct: 169 QVASHAQKY 177


>ref|XP_002525595.1| DNA binding protein, putative [Ricinus communis]
           gi|223535031|gb|EEF36713.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 307

 Score =  174 bits (440), Expect = 9e-42
 Identities = 88/129 (68%), Positives = 97/129 (75%), Gaps = 3/129 (2%)
 Frame = -2

Query: 378 RWQKVAAMIPGKSVDDVRNQYDELLNDVSDIEAGLIPIPGYTTSSFTLDWANNRT---FG 208
           RW KVAAMIPGK+V DV  QY EL  DV++IEAGL+PIPGY TS+FTLDW N+ +   F 
Sbjct: 51  RWHKVAAMIPGKTVGDVIKQYRELEVDVNNIEAGLVPIPGYNTSAFTLDWVNSNSYDGFK 110

Query: 207 QSYDSCGKRGSSARPSDQERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPT 28
            SY   GKR SS RP+DQERKKGVPWTEEEH            GDWRNISRNFV+TRTPT
Sbjct: 111 PSYAFGGKRSSSGRPADQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPT 170

Query: 27  QVASHAQKY 1
           QVASHAQKY
Sbjct: 171 QVASHAQKY 179


>emb|CBI30422.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score =  173 bits (438), Expect = 1e-41
 Identities = 88/129 (68%), Positives = 98/129 (75%), Gaps = 3/129 (2%)
 Frame = -2

Query: 378 RWQKVAAMIPGKSVDDVRNQYDELLNDVSDIEAGLIPIPGYTTSSFTLDWANNRTFG--- 208
           RW KVAAMIPGK+V+DV  QY +L +D+SDIEAGLIPIPGY+TSSF L+W NN+ F    
Sbjct: 51  RWLKVAAMIPGKTVEDVIKQYKDLEDDISDIEAGLIPIPGYSTSSFKLEWNNNQGFDGLK 110

Query: 207 QSYDSCGKRGSSARPSDQERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPT 28
           Q Y   GKRGS+ R +DQERKKGVPWTEEEH            GDWRNISRNFV TRTPT
Sbjct: 111 QFYFPGGKRGSATRSTDQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPT 170

Query: 27  QVASHAQKY 1
           QVASHAQKY
Sbjct: 171 QVASHAQKY 179


>ref|XP_002278729.1| PREDICTED: uncharacterized protein LOC100263069 [Vitis vinifera]
          Length = 312

 Score =  173 bits (438), Expect = 1e-41
 Identities = 88/129 (68%), Positives = 98/129 (75%), Gaps = 3/129 (2%)
 Frame = -2

Query: 378 RWQKVAAMIPGKSVDDVRNQYDELLNDVSDIEAGLIPIPGYTTSSFTLDWANNRTFG--- 208
           RW KVAAMIPGK+V+DV  QY +L +D+SDIEAGLIPIPGY+TSSF L+W NN+ F    
Sbjct: 51  RWLKVAAMIPGKTVEDVIKQYKDLEDDISDIEAGLIPIPGYSTSSFKLEWNNNQGFDGLK 110

Query: 207 QSYDSCGKRGSSARPSDQERKKGVPWTEEEHXXXXXXXXXXXXGDWRNISRNFVITRTPT 28
           Q Y   GKRGS+ R +DQERKKGVPWTEEEH            GDWRNISRNFV TRTPT
Sbjct: 111 QFYFPGGKRGSATRSTDQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPT 170

Query: 27  QVASHAQKY 1
           QVASHAQKY
Sbjct: 171 QVASHAQKY 179


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