BLASTX nr result

ID: Coptis23_contig00014436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014436
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555257.1| PREDICTED: uncharacterized amino-acid permea...   182   5e-44
ref|XP_003536664.1| PREDICTED: uncharacterized amino-acid permea...   181   6e-44
ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cu...   181   8e-44
ref|XP_002526293.1| GABA-specific permease, putative [Ricinus co...   179   2e-43
emb|CBI26962.3| unnamed protein product [Vitis vinifera]              178   5e-43

>ref|XP_003555257.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Glycine max]
          Length = 515

 Score =  182 bits (461), Expect = 5e-44
 Identities = 87/125 (69%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = -1

Query: 372 SSHVP-NGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGLR 196
           SSHV  NG A +DSG +RL +LGYKQELKRDL             SVLTGVTTLYNTGL 
Sbjct: 3   SSHVTANGHAPLDSGHARLKELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNTGLN 62

Query: 195 FGGPIVMVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGSKWAPFASWLTGW 16
           +GGP+ +VYGWF+A  FT++V  SMAEICSS+PTSGGLYYWSAKLAG +WAPFASW+TGW
Sbjct: 63  YGGPVSLVYGWFVASGFTMLVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFASWITGW 122

Query: 15  FNIVG 1
           FNIVG
Sbjct: 123 FNIVG 127


>ref|XP_003536664.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Glycine max]
          Length = 520

 Score =  181 bits (460), Expect = 6e-44
 Identities = 87/126 (69%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
 Frame = -1

Query: 375 ISSHV-PNGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGL 199
           + SHV  NG A +DSG +RL +LGYKQELKRDL             SVLTGVTTLYNTGL
Sbjct: 7   LPSHVVANGHAPLDSGHARLKELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNTGL 66

Query: 198 RFGGPIVMVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGSKWAPFASWLTG 19
            +GGP+ +VYGWF+A  FT+IV  SMAEICSS+PTSGGLYYWSAKLAG +WAPFASW+TG
Sbjct: 67  NYGGPVSLVYGWFLASAFTMIVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFASWITG 126

Query: 18  WFNIVG 1
           WFNIVG
Sbjct: 127 WFNIVG 132


>ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cucumis sativus]
          Length = 513

 Score =  181 bits (459), Expect = 8e-44
 Identities = 83/114 (72%), Positives = 93/114 (81%)
 Frame = -1

Query: 342 VDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGLRFGGPIVMVYGW 163
           +D+G +RLN+LGYKQELKRDL             SVLTG+TTLYN GL FGGP+ +VYGW
Sbjct: 10  LDTGHARLNELGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYNNGLNFGGPVSLVYGW 69

Query: 162 FIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGSKWAPFASWLTGWFNIVG 1
           FIAGFFT+ VG SMAEICSS+PTSGGLYYWSAKLAG  WAPFASW+TGWFNIVG
Sbjct: 70  FIAGFFTMFVGLSMAEICSSYPTSGGLYYWSAKLAGPNWAPFASWMTGWFNIVG 123


>ref|XP_002526293.1| GABA-specific permease, putative [Ricinus communis]
           gi|223534374|gb|EEF36082.1| GABA-specific permease,
           putative [Ricinus communis]
          Length = 528

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/119 (70%), Positives = 93/119 (78%)
 Frame = -1

Query: 357 NGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGLRFGGPIV 178
           NG    DSG +RL +LGYKQELKRDL             SVLTG+TTLYNTGL FGGP+ 
Sbjct: 20  NGKVNSDSGAARLQELGYKQELKRDLSVFSNFAFSFSIISVLTGITTLYNTGLNFGGPVS 79

Query: 177 MVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGSKWAPFASWLTGWFNIVG 1
           + YGWFIAG FT+ VG +MAEICSSFPTSGGLYYWSAKLAG +WAPFASW+TGWFNIVG
Sbjct: 80  LQYGWFIAGLFTMFVGLAMAEICSSFPTSGGLYYWSAKLAGPRWAPFASWITGWFNIVG 138


>emb|CBI26962.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  178 bits (452), Expect = 5e-43
 Identities = 89/130 (68%), Positives = 100/130 (76%)
 Frame = -1

Query: 390 REVMPISSHVPNGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLY 211
           R    + S V +G A  DSGQSRL+QLGYKQELKRDL             SV+TGVTTLY
Sbjct: 5   RSERSLPSQVEDGIA--DSGQSRLSQLGYKQELKRDLSVVSNFAFSFSIISVITGVTTLY 62

Query: 210 NTGLRFGGPIVMVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGSKWAPFAS 31
           N+GL  GGP+VMVYGW IAG F+++VG SMAEICSS+PTSGGLYYWSAKLAG  WAPFAS
Sbjct: 63  NSGLTNGGPVVMVYGWLIAGGFSMLVGLSMAEICSSYPTSGGLYYWSAKLAGPSWAPFAS 122

Query: 30  WLTGWFNIVG 1
           W+TGWFNIVG
Sbjct: 123 WMTGWFNIVG 132


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