BLASTX nr result

ID: Coptis23_contig00014343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014343
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326086.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08
ref|XP_002319952.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08
emb|CAN69916.1| hypothetical protein VITISV_044272 [Vitis vinifera]    62   1e-07
ref|XP_003636665.1| hypothetical protein MTR_052s0005 [Medicago ...    59   9e-07
ref|XP_002522703.1| conserved hypothetical protein [Ricinus comm...    58   1e-06

>ref|XP_002326086.1| predicted protein [Populus trichocarpa] gi|222862961|gb|EEF00468.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 47/114 (41%), Positives = 61/114 (53%)
 Frame = +3

Query: 36  MAKFLFLCFILIEMFMVLAMVHGLEDSEPPNAPVVGARVEPPSVAEPPNAIAERLENEST 215
           MA+F F   I + + ++ AM    + SE  N       V+P  V E     +  ++ E T
Sbjct: 1   MARFGFFFLIFVGILVLQAMAD--DKSEVQNG------VKPKGVEEGGKPASSPMQAE-T 51

Query: 216 ESSEVAEGPESRRLGKHHHSSHESIAXXXXXXXXXXTATFATVFCYIRVTRKRN 377
           ES E AE P  RRLGKHH SS +S+A          TA FA VFCYIRVTR+R+
Sbjct: 52  ESGE-AEAPGIRRLGKHH-SSDKSVAGGGVILGGLVTAIFAAVFCYIRVTRRRH 103


>ref|XP_002319952.1| predicted protein [Populus trichocarpa] gi|222858328|gb|EEE95875.1|
           predicted protein [Populus trichocarpa]
          Length = 111

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
 Frame = +3

Query: 36  MAKFLFLCFILIEMFMVLAMVHGLEDSEPPNAPVVGARVEPPSVAEPPNAIAERLENEST 215
           MA+F F   I + + ++ AM    + SE  +  V    VE    AE   A++     E T
Sbjct: 1   MARFGFYFLIFLGILVLQAMA---DKSEAQHEGVKPKGVE----AEEKPALSPL--QEET 51

Query: 216 ESSEV-AEGPESRRLGKHHHSSHESIAXXXXXXXXXXTATFATVFCYIRVTRKRN 377
           ES E  AE PE RRLGKHH S  +S+A          TATFA VFCYI+VTRKR+
Sbjct: 52  ESREAEAEAPEIRRLGKHH-SYDKSVAGGGVIIGGLATATFAAVFCYIKVTRKRH 105


>emb|CAN69916.1| hypothetical protein VITISV_044272 [Vitis vinifera]
          Length = 101

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 43/113 (38%), Positives = 55/113 (48%)
 Frame = +3

Query: 36  MAKFLFLCFILIEMFMVLAMVHGLEDSEPPNAPVVGARVEPPSVAEPPNAIAERLENEST 215
           M + + +C +L E+ +V A+  G      P   VV        VA+ P+           
Sbjct: 1   MGRLILVCLLLAEILVVQALAGG--SGXDPLGSVV-------RVADQPSP------GGGX 45

Query: 216 ESSEVAEGPESRRLGKHHHSSHESIAXXXXXXXXXXTATFATVFCYIRVTRKR 374
           ES EVAE P +RRLGKHH     SIA          TA FA VFCYIR+TR+R
Sbjct: 46  ESLEVAEAPANRRLGKHHVD--RSIAGGGVIIGGLATAIFAAVFCYIRITRRR 96


>ref|XP_003636665.1| hypothetical protein MTR_052s0005 [Medicago truncatula]
           gi|355502600|gb|AES83803.1| hypothetical protein
           MTR_052s0005 [Medicago truncatula]
          Length = 91

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
 Frame = +3

Query: 144 ARVEPPSVAEPPNAIAERLENESTE-------SSEVAEGPESRRLGKHHHSSHESIAXXX 302
           ++ + P   E    I   L + +T+       S+E AE P  RRLGKHH S+ +S+A   
Sbjct: 5   SKAQSPFPLEHKTQIGVELHDHNTDKVEDHKVSAESAEAPNIRRLGKHH-STDKSVAGGG 63

Query: 303 XXXXXXXTATFATVFCYIRVTRKRN 377
                  TA FA VFCYIRVTRKR+
Sbjct: 64  VIIGGFVTAVFAAVFCYIRVTRKRD 88


>ref|XP_002522703.1| conserved hypothetical protein [Ricinus communis]
           gi|223538053|gb|EEF39665.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 109

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/119 (35%), Positives = 57/119 (47%)
 Frame = +3

Query: 36  MAKFLFLCFILIEMFMVLAMVHGLEDSEPPNAPVVGARVEPPSVAEPPNAIAERLENEST 215
           MA+  F+  IL  + +V AM    E    P+  +V    E   +A    A          
Sbjct: 1   MARPGFVYLILAGILVVQAMAS--ESEHKPSEAMVQIEAESNGLAADQPA---------- 48

Query: 216 ESSEVAEGPESRRLGKHHHSSHESIAXXXXXXXXXXTATFATVFCYIRVTRKRNMEDNL 392
            SS  A    +RRLGKHH SS +S+A          TA FA VFCYIRVTRK++ ++ +
Sbjct: 49  -SSPEAPETMNRRLGKHHSSSDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKKDSDNGV 106


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